KCC003332A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003332A_C01 KCC003332A_c01
gtcgtgcacggtgaattgctaggcacaccggcagtcgaacagaatcgacccttcttgtga
tggtcaccaaatcgaccttgGCAGCGCTCGCGCTGCTCGCCGCCCTCGCGGCGGTGACAG
CGGTTCCGACGAAGGAGACTCTCACGCCTTCGCTGCTGCTGTCGCGCGCCCAGGCGATTC
AGAACTGGCTGGTGGAGACCCGCCGCACGCTCCACAAGCTGCCCGAGCCGGGCTTCCAGG
AGTTTAAGACGCACAGCGCCATCCGGCGCGTTCTGGAGGCGCACAACATCCCTTACAAGT
TCCCGTACGGCAAGACTGGCATTGTGGCCTTCATTGGAGGGGGAAAGCCCGTGGTGGGCT
TGCGCACGGACATGGACGGGTTGCCCATCCACGAGCCAGCGGGAGGCTCGGGCGGCGCCG
GTGGCTTCCAGAGCGAGAACGAGGGCTGGATGCATGCGTGCGGCCACGACGCACACATGA
CCATGGCGCTGGGGGCGGCCAAGCTGCTCAAGGCGGCCAAGGACGCGGGGGAGCTGCCGC
CCGGCACGGTGAACATCGTGTTCCAGCCAGCTGAGGAGGGCGGCGCCGGCGGCGACGTCA
TGATCCAGGAGGGCGCGGTGGACGACACGGACGCCATCTTCGGCATGCACGTGATGCCGC
ACCTGCCCTCCGGCACCGTACACAGCCGCGCCGGCACCATCATGGCCGGAGCGCTGTCCT
TCCGCGTGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003332A_C01 KCC003332A_c01
         (729 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAC20815.1| putative IAA amidohydrolase [Oryza sativa (japon...   176  3e-43
dbj|BAB85405.1| putative IAA-Ala hydrolase [Oryza sativa (japoni...   169  3e-41
gb|AAK97436.2|AF385367_1 IAA amidohydrolase [Arabidopsis suecica...   169  4e-41
gb|AAO25632.1| IAA-amino acid hydrolase [Oryza sativa (indica cu...   168  9e-41
ref|NP_186937.1| IAA-amino acid hydrolase 1 (ILR1) [Arabidopsis ...   167  1e-40

>dbj|BAC20815.1| putative IAA amidohydrolase [Oryza sativa (japonica
           cultivar-group)]
          Length = 444

 Score =  176 bits (446), Expect = 3e-43
 Identities = 106/230 (46%), Positives = 138/230 (59%), Gaps = 6/230 (2%)
 Frame = +3

Query: 51  LLVMVTKSTLAALALLAALAAVT--AVPTKETLTPSLLLSRAQA-IQNWLVETRRTLHKL 221
           LL++V  +  AA+ L A L   T  A P  + L   LL +   A    WL   RR +H+ 
Sbjct: 10  LLLLVAAA--AAVVLFAHLPTTTTAASPALKALGEDLLAAAGAAGFAGWLSGLRRRIHQR 67

Query: 222 PEPGFQEFKTHSAIRRVLEAHNIPYKFPYGKTGIVAFIGGGK---PVVGLRTDMDGLPIH 392
           PE  FQE +T   +R  L+A  +PY +P  +TG+VA I GG    PVV LR DMD LP+ 
Sbjct: 68  PELAFQEVRTSELVRAELDAIGVPYAWPVARTGVVATIDGGAGAGPVVALRADMDALPLQ 127

Query: 393 EPAGGSGGAGGFQSENEGWMHACGHDAHMTMALGAAKLLKAAKDAGELPPGTVNIVFQPA 572
           E          F+S+ +G MHACGHDAH+TM LGAAKLL++ KD  EL  GT+ +VFQPA
Sbjct: 128 ELVDWE-----FKSQEKGKMHACGHDAHVTMLLGAAKLLQSRKD--ELK-GTIKLVFQPA 179

Query: 573 EEGGAGGDVMIQEGAVDDTDAIFGMHVMPHLPSGTVHSRAGTIMAGALSF 722
           EEG AG   +++ G +DD   IFG+HV+P+LP G V SR G  M+ A  F
Sbjct: 180 EEGHAGAYHVLESGLLDDVSVIFGLHVIPNLPVGVVASRPGPFMSAAARF 229

>dbj|BAB85405.1| putative IAA-Ala hydrolase [Oryza sativa (japonica cultivar-group)]
          Length = 442

 Score =  169 bits (429), Expect = 3e-41
 Identities = 102/216 (47%), Positives = 137/216 (63%), Gaps = 4/216 (1%)
 Frame = +3

Query: 78  LAALALLAA-LAAVTAVPTKETLTPSLLLSRAQAIQ--NWLVETRRTLHKLPEPGFQEFK 248
           LAA+A+LAA LA   A    +   P+ LL RA+  +   W+V  RR +H+ PE G++EF 
Sbjct: 11  LAAVAVLAAALAGCGAGAALDD--PAGLLRRAKEAEFAGWMVGLRRRIHENPELGYEEFA 68

Query: 249 THSAIRRVLEAHNIPYKFPYGKTGIVAFIG-GGKPVVGLRTDMDGLPIHEPAGGSGGAGG 425
           T   +RR L+A  IPY+ P+  TG+VA +G GG P V LR DMD LP+ E          
Sbjct: 69  TSELVRRELDALGIPYRHPFAVTGVVATVGTGGPPFVALRADMDALPMQESVEWE----- 123

Query: 426 FQSENEGWMHACGHDAHMTMALGAAKLLKAAKDAGELPPGTVNIVFQPAEEGGAGGDVMI 605
            +S+  G MH CGHDAH+ M LG+A++L+  +D  EL  GTV +VFQPAEEGG G   MI
Sbjct: 124 HKSKVPGKMHGCGHDAHVAMLLGSARILQEHRD--ELK-GTVVLVFQPAEEGGGGAKKMI 180

Query: 606 QEGAVDDTDAIFGMHVMPHLPSGTVHSRAGTIMAGA 713
            +GAV++ +AIFG+HV   +P G V SR G +MAG+
Sbjct: 181 DDGAVENIEAIFGVHVADVVPIGVVASRPGPVMAGS 216

>gb|AAK97436.2|AF385367_1 IAA amidohydrolase [Arabidopsis suecica]
           gi|18652314|gb|AAL77061.1|AF468012_1 IAA-amino acid
           hydrolase [Arabidopsis suecica]
          Length = 442

 Score =  169 bits (428), Expect = 4e-41
 Identities = 90/182 (49%), Positives = 115/182 (62%), Gaps = 1/182 (0%)
 Frame = +3

Query: 186 WLVETRRTLHKLPEPGFQEFKTHSAIRRVLEAHNIPYKFPYGKTGIVAFIGGG-KPVVGL 362
           W+   RR +H+ PE GFQEFKT   +R  L++  + YK+P  KTG+VA+IG G KPV GL
Sbjct: 51  WMRGIRRKIHENPETGFQEFKTSQLVRDELDSLGVKYKYPVAKTGVVAWIGSGSKPVFGL 110

Query: 363 RTDMDGLPIHEPAGGSGGAGGFQSENEGWMHACGHDAHMTMALGAAKLLKAAKDAGELPP 542
           R DMD LP+ E           +S+  G MHACGHD H+ M LGAAKLL+  K    L  
Sbjct: 111 RADMDALPLQELVEWES-----KSKVHGKMHACGHDTHVAMLLGAAKLLQTTK---HLIK 162

Query: 543 GTVNIVFQPAEEGGAGGDVMIQEGAVDDTDAIFGMHVMPHLPSGTVHSRAGTIMAGALSF 722
           GTV +VFQP EEG AG   M+++  +DD D I  +HV P +PSG + SR GT++AGA  F
Sbjct: 163 GTVKLVFQPGEEGYAGAYEMLKDEILDDLDGILSVHVFPSIPSGGIGSRPGTVLAGAGLF 222

Query: 723 RV 728
            V
Sbjct: 223 TV 224

>gb|AAO25632.1| IAA-amino acid hydrolase [Oryza sativa (indica cultivar-group)]
          Length = 442

 Score =  168 bits (425), Expect = 9e-41
 Identities = 101/216 (46%), Positives = 136/216 (62%), Gaps = 4/216 (1%)
 Frame = +3

Query: 78  LAALALLAA-LAAVTAVPTKETLTPSLLLSRAQAIQ--NWLVETRRTLHKLPEPGFQEFK 248
           LAA+A+LAA LA   A    +   P+ LL RA+  +   W+V  RR +H+ PE G++EF 
Sbjct: 11  LAAVAVLAAALAGCGAGAALDD--PAGLLRRAKEAEFAGWMVGLRRRIHENPELGYEEFA 68

Query: 249 THSAIRRVLEAHNIPYKFPYGKTGIVAFIG-GGKPVVGLRTDMDGLPIHEPAGGSGGAGG 425
           T   +RR L+A  IPY+ P+  TG+VA +G GG P V LR DMD LP+ E          
Sbjct: 69  TSELVRRELDALGIPYRHPFAVTGVVATVGTGGPPFVALRADMDALPMQESVEWE----- 123

Query: 426 FQSENEGWMHACGHDAHMTMALGAAKLLKAAKDAGELPPGTVNIVFQPAEEGGAGGDVMI 605
            +S+  G MH CGHDAH+ M LG+A++L+  +D  EL  GTV +VFQPAEEGG G   MI
Sbjct: 124 HKSKVPGKMHGCGHDAHVAMLLGSARILQEHRD--ELK-GTVVLVFQPAEEGGGGAKKMI 180

Query: 606 QEGAVDDTDAIFGMHVMPHLPSGTVHSRAGTIMAGA 713
            +G V++ +AIFG+HV   +P G V SR G +MAG+
Sbjct: 181 DDGTVENIEAIFGVHVADVVPIGVVASRPGPVMAGS 216

>ref|NP_186937.1| IAA-amino acid hydrolase 1 (ILR1) [Arabidopsis thaliana]
           gi|20141573|sp|P54968|ILR1_ARATH IAA-amino acid
           hydrolase 1 gi|6728974|gb|AAF26972.1|AC018363_17
           IAA-amino acid hydrolase (ILR1) [Arabidopsis thaliana]
           gi|15451120|gb|AAK96831.1| IAA-amino acid hydrolase
           (ILR1) [Arabidopsis thaliana] gi|20148341|gb|AAM10061.1|
           IAA-amino acid hydrolase (ILR1) [Arabidopsis thaliana]
          Length = 442

 Score =  167 bits (424), Expect = 1e-40
 Identities = 89/182 (48%), Positives = 115/182 (62%), Gaps = 1/182 (0%)
 Frame = +3

Query: 186 WLVETRRTLHKLPEPGFQEFKTHSAIRRVLEAHNIPYKFPYGKTGIVAFIGG-GKPVVGL 362
           W+   RR +H+ PE GFQEFKT   +R  L++  + YK+P  KTG+VA+IG   KPV GL
Sbjct: 51  WMRGIRRKIHENPETGFQEFKTSQLVRDELDSLGVKYKYPVAKTGVVAWIGSCSKPVFGL 110

Query: 363 RTDMDGLPIHEPAGGSGGAGGFQSENEGWMHACGHDAHMTMALGAAKLLKAAKDAGELPP 542
           R DMD LP+ E           +S+ +G MHACGHD H+ M LGAAKLL+  K    L  
Sbjct: 111 RADMDALPLQELVEWES-----KSKVDGKMHACGHDTHVAMLLGAAKLLQTTK---HLIK 162

Query: 543 GTVNIVFQPAEEGGAGGDVMIQEGAVDDTDAIFGMHVMPHLPSGTVHSRAGTIMAGALSF 722
           GTV +VFQP EEG AG   M+++  +DD D I  +HV P +PSG + SR GT++AGA  F
Sbjct: 163 GTVKLVFQPGEEGYAGAYEMLKDEILDDLDGILSVHVFPSIPSGGIGSRPGTVLAGAGLF 222

Query: 723 RV 728
            V
Sbjct: 223 TV 224



EST assemble image


clone accession position
1 LCL093b10_r AV631393 1 460
2 MX023d01_r BP087033 347 729




Chlamydomonas reinhardtii
Kazusa DNA Research Institute