KCC003331A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003331A_C01 KCC003331A_c01
gcctggcggagggcatgaccaacccgcagcagaagaaggcggcgctcaaccgcttgctca
aggacaacgtggcgctcatcGCGGTGCTGGAGGCCATCGAGCCGGGGACGCCGGACGCCG
GCAACCGCCGCACGCTCATCTGCGTGGCCAACACGCACATCCACGCCAACCCCGAGCTCA
ACGACGTCAAGATCTGGCAGGTGCACACGCTGCTCAAGGGCCTGGAGAAGATCGCGGCCA
GCGCGGACATCCCCATGCTGGTGGCGGGCGACTTCAACAGCGTGCCCGGCAGCCCCGCGC
ACTGCCTGCTGGTCAAGGGCAAGATTGACAGCAACATGATGGACTCCGCCAACGACCCGC
TGCACCTGCTGAAGGACCAGAAGATGTCTCACTCGCTGCCGCTGTCCTCGGCCGTGGCCT
ACCTGCACGACGCGCCGCTGTCGGCGGACGGGCGGCTGTACAAGCAGCGGCAGCGGCTGG
ACGCCAAGCACCACGAGCCGCTGTTCACCAACCTGACCAAGGACTTCAAGGGCACGCTGG
ACTACATCTTCTACACCACCACCAGCCTGCAGCCCACGGCCATCCTAGAGCTGCCCACGG
AGGTGGACGTGGCGACGCGGCCAGACG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003331A_C01 KCC003331A_c01
         (627 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T45676 hypothetical protein F14P22.150 - Arabidopsis thalia...   197  1e-49
ref|NP_191415.2| endonuclease/exonuclease/phosphatase family [Ar...   197  1e-49
ref|NP_191417.1| endonuclease/exonuclease/phosphatase family [Ar...   195  5e-49
gb|AAP53738.1| putative chromaffin granule ATPase II homolog [Or...   185  4e-46
ref|NP_703540.1| hypothetical protein [Plasmodium falciparum 3D7...   111  8e-24

>pir||T45676 hypothetical protein F14P22.150 - Arabidopsis thaliana
           gi|6735373|emb|CAB68194.1| putative protein [Arabidopsis
           thaliana]
          Length = 597

 Score =  197 bits (501), Expect = 1e-49
 Identities = 115/203 (56%), Positives = 138/203 (67%), Gaps = 3/203 (1%)
 Frame = +3

Query: 3   LAEGMTNPQQKKAALNRLLKDNVALIAVLEAIEPGTPDAGN--RRTLICVANTHIHANPE 176
           L E +    QKK ALNRL+KDNVALI VLEA + G+  A N  +R L+CVANTH++   E
Sbjct: 361 LTEAIIPVSQKKNALNRLVKDNVALIVVLEA-KFGSQAADNPGKRQLLCVANTHVNVPHE 419

Query: 177 LNDVKIWQVHTLLKGLEKIAASADIPMLVAGDFNSVPGSPAHCLLVKGKIDSNMMDSAND 356
           L DVK+WQVHTLLKGLEKIAASADIPMLV GDFN+VP S  H LL  GK+D    D   D
Sbjct: 420 LKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNTVPASAPHTLLAVGKVDPLHPDLMVD 479

Query: 357 PLHLLK-DQKMSHSLPLSSAVAYLHDAPLSADGRLYKQRQRLDAKHHEPLFTNLTKDFKG 533
           PL +L+   K++H LPL S  AY   A +  +    +QR+RLD    EPLFTN T+DF G
Sbjct: 480 PLGILRPHSKLTHQLPLVS--AYSQFAKMGGNVITEQQRRRLDPASSEPLFTNCTRDFIG 537

Query: 534 TLDYIFYTTTSLQPTAILELPTE 602
           TLDYIFYT  +L   ++LEL  E
Sbjct: 538 TLDYIFYTADTLTVESLLELLDE 560

>ref|NP_191415.2| endonuclease/exonuclease/phosphatase family [Arabidopsis thaliana]
           gi|18087604|gb|AAL58932.1|AF462845_1
           AT3g58560/F14P22_150 [Arabidopsis thaliana]
           gi|22137046|gb|AAM91368.1| At3g58560/F14P22_150
           [Arabidopsis thaliana]
          Length = 602

 Score =  197 bits (501), Expect = 1e-49
 Identities = 115/203 (56%), Positives = 138/203 (67%), Gaps = 3/203 (1%)
 Frame = +3

Query: 3   LAEGMTNPQQKKAALNRLLKDNVALIAVLEAIEPGTPDAGN--RRTLICVANTHIHANPE 176
           L E +    QKK ALNRL+KDNVALI VLEA + G+  A N  +R L+CVANTH++   E
Sbjct: 366 LTEAIIPVSQKKNALNRLVKDNVALIVVLEA-KFGSQAADNPGKRQLLCVANTHVNVPHE 424

Query: 177 LNDVKIWQVHTLLKGLEKIAASADIPMLVAGDFNSVPGSPAHCLLVKGKIDSNMMDSAND 356
           L DVK+WQVHTLLKGLEKIAASADIPMLV GDFN+VP S  H LL  GK+D    D   D
Sbjct: 425 LKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNTVPASAPHTLLAVGKVDPLHPDLMVD 484

Query: 357 PLHLLK-DQKMSHSLPLSSAVAYLHDAPLSADGRLYKQRQRLDAKHHEPLFTNLTKDFKG 533
           PL +L+   K++H LPL S  AY   A +  +    +QR+RLD    EPLFTN T+DF G
Sbjct: 485 PLGILRPHSKLTHQLPLVS--AYSQFAKMGGNVITEQQRRRLDPASSEPLFTNCTRDFIG 542

Query: 534 TLDYIFYTTTSLQPTAILELPTE 602
           TLDYIFYT  +L   ++LEL  E
Sbjct: 543 TLDYIFYTADTLTVESLLELLDE 565

>ref|NP_191417.1| endonuclease/exonuclease/phosphatase family [Arabidopsis thaliana]
           gi|11282424|pir||T45678 hypothetical protein F14P22.170
           - Arabidopsis thaliana gi|6735375|emb|CAB68196.1|
           putative protein [Arabidopsis thaliana]
          Length = 605

 Score =  195 bits (495), Expect = 5e-49
 Identities = 110/204 (53%), Positives = 138/204 (66%), Gaps = 4/204 (1%)
 Frame = +3

Query: 3   LAEGMTNPQQKKAALNRLLKDNVALIAVLEAIEPGTP-DAGNRRTLICV--ANTHIHANP 173
           L + +    QK+ ALNRL+KDN+ALI VLEA     P D   +R LICV  ANTH++   
Sbjct: 369 LTDALIPQAQKRTALNRLVKDNIALIVVLEAKFGNQPTDPSGKRQLICVVLANTHVNVQQ 428

Query: 174 ELNDVKIWQVHTLLKGLEKIAASADIPMLVAGDFNSVPGSPAHCLLVKGKIDSNMMDSAN 353
           +L DVK+WQVHTLLKGLEKIAASADIPMLV GDFN++PGS  H LLV GK+D    D A 
Sbjct: 429 DLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNTLPGSAPHTLLVMGKVDPMHPDLAV 488

Query: 354 DPLHLLKDQ-KMSHSLPLSSAVAYLHDAPLSADGRLYKQRQRLDAKHHEPLFTNLTKDFK 530
           DPL++L+   K++H LPL SA +      +   G L + R+R+D   +EPLFTN T+DF 
Sbjct: 489 DPLNILRPHTKLTHQLPLVSAYSSFVRKGIMGLG-LEQHRRRIDLNTNEPLFTNCTRDFI 547

Query: 531 GTLDYIFYTTTSLQPTAILELPTE 602
           GT DYIFYT  +L   ++LEL  E
Sbjct: 548 GTHDYIFYTADTLMVESLLELLDE 571

>gb|AAP53738.1| putative chromaffin granule ATPase II homolog [Oryza sativa
           (japonica cultivar-group)]
          Length = 622

 Score =  185 bits (470), Expect = 4e-46
 Identities = 106/192 (55%), Positives = 133/192 (69%), Gaps = 4/192 (2%)
 Frame = +3

Query: 3   LAEGMTNPQQKKAALNRLLKDNVALIAVLEAI--EPGTPDAGNRRTLICVANTHIHANPE 176
           L + +    Q++ AL+RL+KDNVALIAVLEA     GT + G R+ L+CVANTH++ + +
Sbjct: 372 LTDAIIPSTQRRVALSRLIKDNVALIAVLEAKFGNHGTDNPGKRQ-LLCVANTHVNVHQD 430

Query: 177 LNDVKIWQVHTLLKGLEKIAASADIPMLVAGDFNSVPGSPAHCLLVKGKIDSNMMDSAND 356
           L DVK+W+V TLLKGLEKIA SADIPMLV GDFNSVPGS  H LL  GK+D    D A D
Sbjct: 431 LKDVKLWEVQTLLKGLEKIAVSADIPMLVCGDFNSVPGSSPHGLLAMGKVDQLHPDLAID 490

Query: 357 PLHLLKD-QKMSHSLPLSSAVAYLHDAPLSADG-RLYKQRQRLDAKHHEPLFTNLTKDFK 530
           PL +L+   K++H LPL S  AY   A +   G  L  QR+R+D   +EPLFTN T+DF 
Sbjct: 491 PLGILRPASKLTHQLPLVS--AYSSFARMVGVGYDLEHQRRRMDPATNEPLFTNCTRDFT 548

Query: 531 GTLDYIFYTTTS 566
           GT+DYIFYT  +
Sbjct: 549 GTVDYIFYTVVA 560

>ref|NP_703540.1| hypothetical protein [Plasmodium falciparum 3D7]
            gi|23504682|emb|CAD51560.1| hypothetical protein
            [Plasmodium falciparum 3D7]
          Length = 2488

 Score =  111 bits (278), Expect = 8e-24
 Identities = 74/203 (36%), Positives = 105/203 (51%), Gaps = 11/203 (5%)
 Frame = +3

Query: 27   QQKKAALNRLLKDNVALIAVLEAIEPGTP-----DAGNRRTLICVANTHIHANPELNDVK 191
            Q+  + + RLLKDNVAL+ +LE I+  +      +    + L+ VANTHI ANPE N VK
Sbjct: 2253 QKNPSLVKRLLKDNVALVILLECIQQYSKIYDKSEEKQNKKLLIVANTHIVANPEANYVK 2312

Query: 192  IWQVHTLLKGLEKIAAS-----ADIP-MLVAGDFNSVPGSPAHCLLVKGKIDSNMMDSAN 353
            IWQ   L+K +E +  +       IP +++ GDFNS P S  + L+ K        D  +
Sbjct: 2313 IWQTQILVKVIEYLKINFIKKYETIPSLIICGDFNSTPSSAVYQLIYKKTCSRTHEDFNS 2372

Query: 354  DPLHLLKDQKMSHSLPLSSAVAYLHDAPLSADGRLYKQRQRLDAKHHEPLFTNLTKDFKG 533
            D   LL D K+ H+L L SA A         +   Y      + + +EPLFTN T +F G
Sbjct: 2373 DKYSLLTDLKLGHNLNLKSAYAISKLLSQKLNPEEYN-----NLELYEPLFTNYTSNFIG 2427

Query: 534  TLDYIFYTTTSLQPTAILELPTE 602
             LDYIFY   +L   + + +  E
Sbjct: 2428 CLDYIFYNDENLNIISTVNVADE 2450



EST assemble image


clone accession position
1 LCL092g10_r AV631370 1 449
2 MXL067d05_r BP096941 222 627




Chlamydomonas reinhardtii
Kazusa DNA Research Institute