KCC003325A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003325A_C01 KCC003325A_c01
ctgtgtggacgccctcggagaaggtgatcgcccaggcgtacgacaacccgatccccggct
acgccactcccaccacctccAACCTGCGCCTGTGGGACGCGGTGCCGGTGCACGAGTTCG
ACCTCAGCGCCTTCAACGCCGGCGACTACGACCGGGCCATGCTGGAGCGCGAGCGCGCCG
AGGGCATCAGCGCCGTGCTGTACCCCAACGACTCCACCCCCGAGGGCAAGGAGCTGCGCC
TCAAGCAGCAGTACTTCTTGGTGTGCGCCTCGCTGCACGACGTGATGTCGAGCTTGCGCG
CTGTGCACGGCGCCAACTGGGAGGCGCTGCCGGAGAAGGCGTGCTTCCAGCTGAACGACA
CGCACCCCACCATCGCGGTGGCGGAGCTGATGCGCCTGCTGGTGGACGTGGAGGGACTGG
AGTGGGATGCCGCCTGGACCATCACCACCAAGTGCCTGAACTACACCAACCACACCGTGA
TGCCCGAGGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003325A_C01 KCC003325A_c01
         (490 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAD98535.1| glycogen phosphorylase 1, probable [Cryptosporid...   207  7e-53
emb|CAD28434.1| glycogen phosphorylase 1; possible glycogen phos...   196  2e-49
ref|XP_327313.1| hypothetical protein [Neurospora crassa] gi|289...   190  7e-48
sp|Q00766|PHS1_DICDI GLYCOGEN PHOSPHORYLASE 1 (GP1) gi|478597|pi...   189  2e-47
emb|CAA44069.1| glycogen phosphorylase 1 [Dictyostelium discoideum]   189  2e-47

>emb|CAD98535.1| glycogen phosphorylase 1, probable [Cryptosporidium parvum]
          Length = 901

 Score =  207 bits (526), Expect = 7e-53
 Identities = 95/161 (59%), Positives = 118/161 (73%)
 Frame = +3

Query: 6   WTPSEKVIAQAYDNPIPGYATPTTSNLRLWDAVPVHEFDLSAFNAGDYDRAMLERERAEG 185
           W   E + A AYDNPIPG+ T    NLRLW A P  EFD +AFN G Y  A+  R+RAE 
Sbjct: 258 WVDGEVIQAVAYDNPIPGFDTYNCINLRLWKATPSREFDFNAFNEGKYVDAVCARQRAEY 317

Query: 186 ISAVLYPNDSTPEGKELRLKQQYFLVCASLHDVMSSLRAVHGANWEALPEKACFQLNDTH 365
           I++VLYPND+T +GKELRLKQQYF VCA++ D++   +     +W  LP+K   QLNDTH
Sbjct: 318 ITSVLYPNDNTEQGKELRLKQQYFFVCATIQDILRRFKKSGKVDWSELPKKVSCQLNDTH 377

Query: 366 PTIAVAELMRLLVDVEGLEWDAAWTITTKCLNYTNHTVMPE 488
           PTIAVAE+MR+L+DVE L+WD AW IT++C NYTNHTV+PE
Sbjct: 378 PTIAVAEMMRILIDVEELDWDFAWNITSECFNYTNHTVLPE 418

>emb|CAD28434.1| glycogen phosphorylase 1; possible glycogen phosphorylase
           [Aspergillus fumigatus]
          Length = 852

 Score =  196 bits (497), Expect = 2e-49
 Identities = 95/162 (58%), Positives = 113/162 (69%), Gaps = 1/162 (0%)
 Frame = +3

Query: 6   WTPSEKVIAQAYDNPIPGYATPTTSNLRLWDAVPVH-EFDLSAFNAGDYDRAMLERERAE 182
           W   E V A AYD PIPGY T TT+NLRLW +     EFD   FNAGDY+ A+ +++RAE
Sbjct: 219 WQDGEAVQAVAYDVPIPGYGTRTTNNLRLWSSKAASGEFDFQKFNAGDYESAVADQQRAE 278

Query: 183 GISAVLYPNDSTPEGKELRLKQQYFLVCASLHDVMSSLRAVHGANWEALPEKACFQLNDT 362
            ISAVLYPND+   GKELRLKQQYF   ASL+D++   +    A W   PE+   QLNDT
Sbjct: 279 TISAVLYPNDNLERGKELRLKQQYFWCAASLYDIVRRFKKTKRA-WSKFPEQVAIQLNDT 337

Query: 363 HPTIAVAELMRLLVDVEGLEWDAAWTITTKCLNYTNHTVMPE 488
           HPT+A+ EL R+L+D EGLEWD AWTI TK   YTNHTV+PE
Sbjct: 338 HPTLAIVELQRILIDQEGLEWDEAWTIVTKTFGYTNHTVLPE 379

>ref|XP_327313.1| hypothetical protein [Neurospora crassa] gi|28923764|gb|EAA32930.1|
           hypothetical protein [Neurospora crassa]
          Length = 905

 Score =  190 bits (483), Expect = 7e-48
 Identities = 91/162 (56%), Positives = 115/162 (70%), Gaps = 1/162 (0%)
 Frame = +3

Query: 6   WTPSEKVIAQAYDNPIPGYATPTTSNLRLWDAVPVH-EFDLSAFNAGDYDRAMLERERAE 182
           W   E V A AYD PIPGYATP+T+NLRLW +     EFD   FN+GDY+ ++ +++RAE
Sbjct: 272 WEGGEIVKAVAYDVPIPGYATPSTNNLRLWSSKAASGEFDFQKFNSGDYENSVADQQRAE 331

Query: 183 GISAVLYPNDSTPEGKELRLKQQYFLVCASLHDVMSSLRAVHGANWEALPEKACFQLNDT 362
            ISAVLYPND+   GKELRLKQQYF V ASL+D++   +      W+  P++   QLNDT
Sbjct: 332 TISAVLYPNDNLDRGKELRLKQQYFWVAASLYDIVRRFKKSRRP-WKEFPDQVAIQLNDT 390

Query: 363 HPTIAVAELMRLLVDVEGLEWDAAWTITTKCLNYTNHTVMPE 488
           HPT+AV EL R+LVD+EGL+W+ AW I T    YTNHTV+PE
Sbjct: 391 HPTLAVVELQRILVDLEGLDWEEAWNIVTNTFGYTNHTVLPE 432

>sp|Q00766|PHS1_DICDI GLYCOGEN PHOSPHORYLASE 1 (GP1) gi|478597|pir||S20595 glycogen
           phosphorylase (EC 2.4.1.1) 1 - slime mold
           (Dictyostelium discoideum)
          Length = 853

 Score =  189 bits (479), Expect = 2e-47
 Identities = 89/161 (55%), Positives = 111/161 (68%)
 Frame = +3

Query: 6   WTPSEKVIAQAYDNPIPGYATPTTSNLRLWDAVPVHEFDLSAFNAGDYDRAMLERERAEG 185
           W   E V A AYD P+PGY T  T+N+R+W + P  EFDL AFN G+Y  A+  ++R+E 
Sbjct: 236 WDHGELVQAIAYDTPVPGYHTTNTNNIRIWSSKPHKEFDLDAFNGGNYLSAVEAKQRSEN 295

Query: 186 ISAVLYPNDSTPEGKELRLKQQYFLVCASLHDVMSSLRAVHGANWEALPEKACFQLNDTH 365
           I++VLYPND+T  GKELRLKQQYF V A+L DV+   +  H  NW+  P K   QLNDTH
Sbjct: 296 ITSVLYPNDNTYSGKELRLKQQYFFVAATLCDVIRRFKKSH-QNWQDFPNKVAIQLNDTH 354

Query: 366 PTIAVAELMRLLVDVEGLEWDAAWTITTKCLNYTNHTVMPE 488
           PTI V EL R L+D EGL+W+ AW I TK   YTNHT++PE
Sbjct: 355 PTIGVVELFRKLIDEEGLQWEEAWDIVTKTFAYTNHTILPE 395

>emb|CAA44069.1| glycogen phosphorylase 1 [Dictyostelium discoideum]
          Length = 846

 Score =  189 bits (479), Expect = 2e-47
 Identities = 89/161 (55%), Positives = 111/161 (68%)
 Frame = +3

Query: 6   WTPSEKVIAQAYDNPIPGYATPTTSNLRLWDAVPVHEFDLSAFNAGDYDRAMLERERAEG 185
           W   E V A AYD P+PGY T  T+N+R+W + P  EFDL AFN G+Y  A+  ++R+E 
Sbjct: 229 WDHGELVQAIAYDTPVPGYHTTNTNNIRIWSSKPHKEFDLDAFNGGNYLSAVEAKQRSEN 288

Query: 186 ISAVLYPNDSTPEGKELRLKQQYFLVCASLHDVMSSLRAVHGANWEALPEKACFQLNDTH 365
           I++VLYPND+T  GKELRLKQQYF V A+L DV+   +  H  NW+  P K   QLNDTH
Sbjct: 289 ITSVLYPNDNTYSGKELRLKQQYFFVAATLCDVIRRFKKSH-QNWQDFPNKVAIQLNDTH 347

Query: 366 PTIAVAELMRLLVDVEGLEWDAAWTITTKCLNYTNHTVMPE 488
           PTI V EL R L+D EGL+W+ AW I TK   YTNHT++PE
Sbjct: 348 PTIGVVELFRKLIDEEGLQWEEAWDIVTKTFAYTNHTILPE 388



EST assemble image


clone accession position
1 LCL089e12_r AV631153 1 426
2 MXL079d07_r BP097672 131 490




Chlamydomonas reinhardtii
Kazusa DNA Research Institute