KCC003321A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003321A_C01 KCC003321A_c01
gcaatatcagtacATGCACGAGGAATAGTCTCCCAACGCTTGAATCTTACGCTTGCGAGG
GAGTGTTGCACCAATTACTACTTGCAAAAATTGCTCGCTCAGGACCAGGTGCCCATACGG
CAAACATAATATCACTGTCAAACCCCCGCGCTGACACTCAACTGCTTGGGAAAAACACAG
TGAAAGGGTCGCGTGTCATCCTGCAATTGCCGAAACGTCATCGGCATCGCCCAGCGCGAT
TCGGTTCGAGTGTTACACGAGCAACAGCTTTCCCATGATTTCGCTTGGTTCAGGCCTCTG
CCGACGAATGGGGTCGGCAACCAAAGCGTCTGGCTCGGCATGCCACGTACCGGGTGCCGC
CTCCACTGCGTTCGCGCAGCCAGTCCGCAAGCACCAGCCCATGCGGCAGCCCCTTCACGC
CGTCGGCACGCCCGGGCCATCGGGCCGGCCTCTCCTCTTTGAGCCCATCACGCTGCGGCA
GCTGACCATCCCCAACCGCATCTGGCTGTCCCCAATGTGCCAGTACTCGGCTGTGGACGG
AGCGCCCAACACC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003321A_C01 KCC003321A_c01
         (553 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|ZP_00091592.1| COG1902: NADH:flavin oxidoreductases, Old Yel...    57  2e-07
ref|NP_743636.1| xenobiotic reductase, putative [Pseudomonas put...    56  4e-07
ref|ZP_00057359.1| COG1902: NADH:flavin oxidoreductases, Old Yel...    54  1e-06
ref|NP_252412.1| probable FMN oxidoreductase [Pseudomonas aerugi...    54  2e-06
ref|ZP_00084113.1| COG1902: NADH:flavin oxidoreductases, Old Yel...    52  4e-06

>ref|ZP_00091592.1| COG1902: NADH:flavin oxidoreductases, Old Yellow Enzyme family
           [Azotobacter vinelandii]
          Length = 368

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = +2

Query: 452 LLFEPITLRQLTIPNRIWLSPMCQYSAVDGAPN 550
           LLFEP+TLRQLT+PNRI +SPMCQYSA DG  N
Sbjct: 3   LLFEPLTLRQLTLPNRIVVSPMCQYSARDGLAN 35

>ref|NP_743636.1| xenobiotic reductase, putative [Pseudomonas putida KT2440]
           gi|24982949|gb|AAN67100.1|AE016338_10 xenobiotic
           reductase, putative [Pseudomonas putida KT2440]
          Length = 368

 Score = 55.8 bits (133), Expect = 4e-07
 Identities = 25/33 (75%), Positives = 28/33 (84%)
 Frame = +2

Query: 452 LLFEPITLRQLTIPNRIWLSPMCQYSAVDGAPN 550
           LL EP TLRQLT+PNRI +SPMCQYSA+DG  N
Sbjct: 3   LLLEPYTLRQLTLPNRIAVSPMCQYSAIDGLAN 35

>ref|ZP_00057359.1| COG1902: NADH:flavin oxidoreductases, Old Yellow Enzyme family
           [Thermobifida fusca]
          Length = 357

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 22/32 (68%), Positives = 26/32 (80%)
 Frame = +2

Query: 455 LFEPITLRQLTIPNRIWLSPMCQYSAVDGAPN 550
           LFEP+ LR   IPNR+W+SPMCQYSA +G PN
Sbjct: 7   LFEPLKLRDTLIPNRVWVSPMCQYSAHNGVPN 38

>ref|NP_252412.1| probable FMN oxidoreductase [Pseudomonas aeruginosa PA01]
           gi|11351308|pir||G83180 probable FMN oxidoreductase
           PA3723 [imported] - Pseudomonas aeruginosa (strain PAO1)
           gi|9949889|gb|AAG07110.1|AE004791_7 probable FMN
           oxidoreductase [Pseudomonas aeruginosa PAO1]
          Length = 368

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 23/33 (69%), Positives = 29/33 (87%)
 Frame = +2

Query: 452 LLFEPITLRQLTIPNRIWLSPMCQYSAVDGAPN 550
           LLFEP++LRQ+T+PNRI +SPMCQYSA +G  N
Sbjct: 3   LLFEPLSLRQITLPNRIAVSPMCQYSAQEGLAN 35

>ref|ZP_00084113.1| COG1902: NADH:flavin oxidoreductases, Old Yellow Enzyme family
           [Pseudomonas fluorescens PfO-1]
          Length = 368

 Score = 52.4 bits (124), Expect = 4e-06
 Identities = 24/33 (72%), Positives = 27/33 (81%)
 Frame = +2

Query: 452 LLFEPITLRQLTIPNRIWLSPMCQYSAVDGAPN 550
           LL EP TLRQLT+ NRI +SPMCQYS+VDG  N
Sbjct: 3   LLLEPFTLRQLTLSNRIAVSPMCQYSSVDGLAN 35



EST assemble image


clone accession position
1 MXL092f09_r BP098392 1 425
2 MX241h04_r BP091625 14 522
3 LCL088d06_r AV631074 20 553




Chlamydomonas reinhardtii
Kazusa DNA Research Institute