KCC003317A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003317A_C01 KCC003317A_c01
cggttcacgagccaggtggacgcgaagccagacctcagcgagtggacggaccgcacgcta
ttgtaccaaatgCTGGTGCACTTAGCGGACATCGCGAACCCGTCGCGGCCGTTCCACCTG
GCGCGGGGCTGGGCTGAGCGCGTGATTGAGGAGTTCTGCGACCAGGGCGACCGCGAGGCG
GCCTGTGGGCTGCCGGTGTCCGCGATGTGCAACCGCGTCACCATGAACATGCCGCGCGCG
CAGCTAGGCTTCATCAACATCTTTCTGAAGCCCACGCTGAACTGCTTCGAGCGGGCGGCG
CCGGACTTCGTGCGCATGGCGCTGGAGCACCTGGACCTGACCATCAAGGAGTGGCAGGGC
CTGGACGCGGGGGGGCTGGTGCTGCCGCCGCACCTCATGCCGCAGCCGTCGCCGCAGGCG
GGGCAACCGGAGCAGGCGCAGCAGCAACAGCAGCAGCAGGGCTCGCCGGCGACTGGGGGG
AAAGTCGAGGACACGCGGGCACCGCCGATGCAGCCGCAGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003317A_C01 KCC003317A_c01
         (520 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAC13745.1| 3',5'-cyclic AMP phosphodiesterase gi|741032|prf|...    82  5e-15
gb|AAA97890.1| cAMP-specific phosphodiesterase HPDE4D1 variant [...    81  7e-15
gb|AAC00069.1| cAMP-specific phosphodiesterase PDE4D5 [Homo sapi...    81  7e-15
gb|AAN10117.1| cAMP-specific phosphodiesterase PDE4D6 [Homo sapi...    81  7e-15
gb|AAH36319.1| PDE4D protein [Homo sapiens]                            81  7e-15

>gb|AAC13745.1| 3',5'-cyclic AMP phosphodiesterase gi|741032|prf||2006290A cAMP
           phosphodiesterase
          Length = 604

 Score = 81.6 bits (200), Expect = 5e-15
 Identities = 45/143 (31%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
 Frame = +1

Query: 34  LSEWTDRTLLYQMLVHLADIANPSRPFHLARGWAERVIEEFCDQGDREAACGLPVSAMCN 213
           L  ++DR  + Q +VH AD++NP++P  L R W +R++EEF  QGDRE   G+ +S MC+
Sbjct: 397 LDNYSDRIQVLQNMVHCADLSNPTKPLQLYRQWTDRIMEEFFPQGDRERERGMEISPMCD 456

Query: 214 RVTMNMPRAQLGFINIFLKPTLNCFERAAPDFVRMALEHLDLTIKEWQGLDAGGLVLPPH 393
           +   ++ ++Q+GFI+  + P    +        +  L+ L+   +EW             
Sbjct: 457 KHNASVEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLE-DNREWY----------QS 505

Query: 394 LMPQ-PSPQAGQPEQAQQQQQQQ 459
            +PQ PSP    PE+ +Q Q ++
Sbjct: 506 TIPQSPSPAPDDPEEGRQGQTEK 528

>gb|AAA97890.1| cAMP-specific phosphodiesterase HPDE4D1 variant [Homo sapiens]
          Length = 585

 Score = 81.3 bits (199), Expect = 7e-15
 Identities = 45/143 (31%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
 Frame = +1

Query: 34  LSEWTDRTLLYQMLVHLADIANPSRPFHLARGWAERVIEEFCDQGDREAACGLPVSAMCN 213
           L  ++DR  + Q +VH AD++NP++P  L R W +R++EEF  QGDRE   G+ +S MC+
Sbjct: 378 LDNYSDRIQVLQNMVHCADLSNPTKPLQLYRQWTDRIMEEFFRQGDRERERGMEISPMCD 437

Query: 214 RVTMNMPRAQLGFINIFLKPTLNCFERAAPDFVRMALEHLDLTIKEWQGLDAGGLVLPPH 393
           +   ++ ++Q+GFI+  + P    +        +  L+ L+   +EW             
Sbjct: 438 KHNASVEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLE-DNREWY----------QS 486

Query: 394 LMPQ-PSPQAGQPEQAQQQQQQQ 459
            +PQ PSP    PE+ +Q Q ++
Sbjct: 487 TIPQSPSPAPDDPEEGRQGQTEK 509

>gb|AAC00069.1| cAMP-specific phosphodiesterase PDE4D5 [Homo sapiens]
          Length = 745

 Score = 81.3 bits (199), Expect = 7e-15
 Identities = 45/143 (31%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
 Frame = +1

Query: 34  LSEWTDRTLLYQMLVHLADIANPSRPFHLARGWAERVIEEFCDQGDREAACGLPVSAMCN 213
           L  ++DR  + Q +VH AD++NP++P  L R W +R++EEF  QGDRE   G+ +S MC+
Sbjct: 538 LDNYSDRIQVLQNMVHCADLSNPTKPLQLYRQWTDRIMEEFFRQGDRERERGMEISPMCD 597

Query: 214 RVTMNMPRAQLGFINIFLKPTLNCFERAAPDFVRMALEHLDLTIKEWQGLDAGGLVLPPH 393
           +   ++ ++Q+GFI+  + P    +        +  L+ L+   +EW             
Sbjct: 598 KHNASVEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLE-DNREWY----------QS 646

Query: 394 LMPQ-PSPQAGQPEQAQQQQQQQ 459
            +PQ PSP    PE+ +Q Q ++
Sbjct: 647 TIPQSPSPAPDDPEEGRQGQTEK 669

>gb|AAN10117.1| cAMP-specific phosphodiesterase PDE4D6 [Homo sapiens]
          Length = 518

 Score = 81.3 bits (199), Expect = 7e-15
 Identities = 45/143 (31%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
 Frame = +1

Query: 34  LSEWTDRTLLYQMLVHLADIANPSRPFHLARGWAERVIEEFCDQGDREAACGLPVSAMCN 213
           L  ++DR  + Q +VH AD++NP++P  L R W +R++EEF  QGDRE   G+ +S MC+
Sbjct: 311 LDNYSDRIQVLQNMVHCADLSNPTKPLQLYRQWTDRIMEEFFRQGDRERERGMEISPMCD 370

Query: 214 RVTMNMPRAQLGFINIFLKPTLNCFERAAPDFVRMALEHLDLTIKEWQGLDAGGLVLPPH 393
           +   ++ ++Q+GFI+  + P    +        +  L+ L+   +EW             
Sbjct: 371 KHNASVEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLE-DNREWY----------QS 419

Query: 394 LMPQ-PSPQAGQPEQAQQQQQQQ 459
            +PQ PSP    PE+ +Q Q ++
Sbjct: 420 TIPQSPSPAPDDPEEGRQGQTEK 442

>gb|AAH36319.1| PDE4D protein [Homo sapiens]
          Length = 518

 Score = 81.3 bits (199), Expect = 7e-15
 Identities = 45/143 (31%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
 Frame = +1

Query: 34  LSEWTDRTLLYQMLVHLADIANPSRPFHLARGWAERVIEEFCDQGDREAACGLPVSAMCN 213
           L  ++DR  + Q +VH AD++NP++P  L R W +R++EEF  QGDRE   G+ +S MC+
Sbjct: 311 LDNYSDRIQVLQNMVHCADLSNPTKPLQLYRQWTDRIMEEFFRQGDRERERGMEISPMCD 370

Query: 214 RVTMNMPRAQLGFINIFLKPTLNCFERAAPDFVRMALEHLDLTIKEWQGLDAGGLVLPPH 393
           +   ++ ++Q+GFI+  + P    +        +  L+ L+   +EW             
Sbjct: 371 KHNASVEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLE-DNREWY----------QS 419

Query: 394 LMPQ-PSPQAGQPEQAQQQQQQQ 459
            +PQ PSP    PE+ +Q Q ++
Sbjct: 420 TIPQSPSPAPDDPEEGRQGQTEK 442



EST assemble image


clone accession position
1 MXL053g08_r BP096158 1 341
2 LCL087c03_r BP096158 73 520




Chlamydomonas reinhardtii
Kazusa DNA Research Institute