Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003309A_C01 KCC003309A_c01
(301 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_085303.1| Type III secretion protein [Shigella flexneri] ... 33 1.4
ref|NP_858273.1| MxiK [Shigella flexneri 2a] gi|27735217|sp|Q060... 33 1.4
ref|NP_273266.1| ferredoxin, 4Fe-4S bacterial type [Neisseria me... 33 1.4
gb|AAC80425.1| heat shock transcription factor 1 [Mus musculus] 32 1.9
sp|P38532|HSF1_MOUSE Heat shock factor protein 1 (HSF 1) (Heat s... 32 1.9
>ref|NP_085303.1| Type III secretion protein [Shigella flexneri]
gi|829067|dbj|BAA09149.1| ORF9 [Shigella sonnei]
gi|13310635|gb|AAK18459.1|AF348706_148 Type III
secretion protein [Shigella flexneri]
Length = 188
Score = 32.7 bits (73), Expect = 1.4
Identities = 20/68 (29%), Positives = 30/68 (43%), Gaps = 5/68 (7%)
Frame = -1
Query: 196 CPLSP-SGLLCLLIEGYSFTQAVAFFAPTSSSRDKKHAESVAGPTNGRPRKALAICCRCG 20
C + P SG+ + + ++ AVA+F + SR H+E V G+ K R G
Sbjct: 68 CDIEPLSGVTAMFVANWNLLPAVAYFIGSQESRLINHSEMVISYYGGKISKQGEAAIRSG 127
Query: 19 CW----WK 8
W WK
Sbjct: 128 FWHLIAWK 135
>ref|NP_858273.1| MxiK [Shigella flexneri 2a] gi|27735217|sp|Q06082|MXIK_SHIFL MxiK
protein gi|12329084|emb|CAC05815.1| MxiK, putative
component of the Mxi-Spa secretion machinery [Shigella
flexneri] gi|18462555|gb|AAL72327.1| MxiK [Shigella
flexneri 2a]
Length = 175
Score = 32.7 bits (73), Expect = 1.4
Identities = 20/68 (29%), Positives = 30/68 (43%), Gaps = 5/68 (7%)
Frame = -1
Query: 196 CPLSP-SGLLCLLIEGYSFTQAVAFFAPTSSSRDKKHAESVAGPTNGRPRKALAICCRCG 20
C + P SG+ + + ++ AVA+F + SR H+E V G+ K R G
Sbjct: 55 CDIEPLSGVTAMFVANWNLLPAVAYFIGSQESRLINHSEMVISYYGGKISKQGEAAIRSG 114
Query: 19 CW----WK 8
W WK
Sbjct: 115 FWHLIAWK 122
>ref|NP_273266.1| ferredoxin, 4Fe-4S bacterial type [Neisseria meningitidis MC58]
gi|11353143|pir||A81225 ferredoxin, 4Fe-4S bacterial
type NMB0208 [imported] - Neisseria meningitidis (strain
MC58 serogroup B) gi|7225430|gb|AAF40665.1| ferredoxin,
4Fe-4S bacterial type [Neisseria meningitidis MC58]
Length = 279
Score = 32.7 bits (73), Expect = 1.4
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 42 SAFRGRPFVGPATLSACFLSRLELVGAKNATACVNEYPS 158
SA G+PFV PA A L+R++ TAC+ P+
Sbjct: 53 SALLGKPFVAPAKTQAKALARIDETACIGCTACIRACPA 91
>gb|AAC80425.1| heat shock transcription factor 1 [Mus musculus]
Length = 486
Score = 32.3 bits (72), Expect = 1.9
Identities = 24/78 (30%), Positives = 36/78 (45%), Gaps = 1/78 (1%)
Frame = -1
Query: 259 PPAGPLLSSPLAQSKGC-SAKECPLSPSGLLCLLIEGYSFTQAVAFFAPTSSSRDKKHAE 83
PP+ P L S G S+ + PLSP+ + ++ T A + AP D A+
Sbjct: 262 PPSPPHSPRVLEASPGRPSSMDTPLSPTAFIDSILRESEPTPAASNTAPM----DTTGAQ 317
Query: 82 SVAGPTNGRPRKALAICC 29
+ A PT P K L++ C
Sbjct: 318 APALPTPSTPEKCLSVAC 335
>sp|P38532|HSF1_MOUSE Heat shock factor protein 1 (HSF 1) (Heat shock transcription
factor 1) (HSTF 1)
Length = 525
Score = 32.3 bits (72), Expect = 1.9
Identities = 24/78 (30%), Positives = 36/78 (45%), Gaps = 1/78 (1%)
Frame = -1
Query: 259 PPAGPLLSSPLAQSKGC-SAKECPLSPSGLLCLLIEGYSFTQAVAFFAPTSSSRDKKHAE 83
PP+ P L S G S+ + PLSP+ + ++ T A + AP D A+
Sbjct: 301 PPSPPHSPRVLEASPGRPSSMDTPLSPTAFIDSILRESEPTPAASNTAPM----DTTGAQ 356
Query: 82 SVAGPTNGRPRKALAICC 29
+ A PT P K L++ C
Sbjct: 357 APALPTPSTPEKCLSVAC 374
