KCC003308A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003308A_C01 KCC003308A_c01
cagcagccggggcacgcgctccgctgccagctcagccggcggcgctgcagccttaggtgg
cggcggtggcggcggctactCGACCCACATCACCACGGTGTACGGTGGCGGCGTCACGCC
GATGCCGTACTACCCGGCCCCCAGCCCCATGTACGATCCGTACGTCCAGGATCCACTGCC
CACGTCAACCGCCACACGGTCGGCCGCCTACTACGGGTCGACGACCTACAACGAGGAGGA
TGAGGACGACAGCATTGGCTTCATCATGGCCGTACTGTTGGGGCTGAACGGCTACTGCGC
CATTAGCGAGATCCTGCGCGGCCTGTCAGCGGACTCCTCAAGCGGCAGTAGCAGCGGCAC
CTGGAGCGGCAGTAGCAACGGCCTGGCGGCGCGGGGGGCGCCGGTGGCCGTGTGCCGGGT
GCAGGTGGCAGTGCTGGCGTCGGCGAGGGAGGAGCTGCAGGCCGACATCGCCGAGCTGGT
TGAGTCGGTGGACACACGCAGCGCCAGTGGGCTTCACAAGCTGCTGCAGGAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003308A_C01 KCC003308A_c01
         (532 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_923492.1| hypothetical protein gll0546 [Gloeobacter viola...    54  2e-06
pir||T31611 hypothetical protein Y50E8A.g - Caenorhabditis elegans     44  9e-06
pir||S21961 proline-rich protein APG - Arabidopsis thaliana gi|2...    50  1e-05
pir||A86335 T20H2.9 protein - Arabidopsis thaliana gi|8778985|gb...    50  2e-05
sp|P40602|APG_ARATH Anter-specific proline-rich protein APG prec...    50  2e-05

>ref|NP_923492.1| hypothetical protein gll0546 [Gloeobacter violaceus]
           gi|35211107|dbj|BAC88487.1| gll0546 [Gloeobacter
           violaceus]
          Length = 334

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 51/165 (30%), Positives = 70/165 (41%), Gaps = 6/165 (3%)
 Frame = +2

Query: 56  GGGGGGGYSTHITTVYGGGVTPMPYYPAPSPMYDPYVQDPLPTSTATRSAAYYGSTTYNE 235
           GG  GGG     +  Y    +P  Y PAP   Y P    P+P         YY       
Sbjct: 40  GGRIGGGSFRAPSRSYTPAPSPRTYSPAPGGYYSPPPVMPVPVPIP--GPGYYPPVGGGY 97

Query: 236 EDEDDSIG----FIMAVLLGLNGYCAISEILRGLSADSSSGSSSGTWSGSSNGLAARGAP 403
                 IG     ++ V++G  G+  +  I RG         +SG   G     AA   P
Sbjct: 98  AVGGPGIGLSSILLIVVVVGA-GFYVLRVIRRG---------ASGAVGGQDGAYAAGFDP 147

Query: 404 --VAVCRVQVAVLASAREELQADIAELVESVDTRSASGLHKLLQE 532
             V + R+QVA+LASA+ +LQ D+  + E  DT +  GL +L QE
Sbjct: 148 DKVEIFRLQVALLASAK-QLQRDLTRIAEEADTTTPEGLARLNQE 191

>pir||T31611 hypothetical protein Y50E8A.g - Caenorhabditis elegans
          Length = 1585

 Score = 44.3 bits (103), Expect(2) = 9e-06
 Identities = 42/129 (32%), Positives = 47/129 (35%)
 Frame = +2

Query: 17   RSAASSAGGAAALGGGGGGGYSTHITTVYGGGVTPMPYYPAPSPMYDPYVQDPLPTSTAT 196
            R    S+GG  A GGGGGGG S      Y     P P  P P P   P          A 
Sbjct: 754  RRGGGSSGGGYASGGGGGGGSSGGSGGRYSSAAAPPPPPPPPPPAPAP----------AP 803

Query: 197  RSAAYYGSTTYNEEDEDDSIGFIMAVLLGLNGYCAISEILRGLSADSSSGSSSGTWSGSS 376
             S  Y G ++      D + G       G  G        RG S  SSSG   G+  G S
Sbjct: 804  SSGGYSGGSS-----GDSAAG-------GGGGSS------RGYSEGSSSGGGGGSSGGYS 845

Query: 377  NGLAARGAP 403
             G AA   P
Sbjct: 846  GGSAAPPPP 854

 Score = 42.4 bits (98), Expect(2) = 1e-04
 Identities = 40/131 (30%), Positives = 46/131 (34%)
 Frame = +2

Query: 5    SRGTRSAASSAGGAAALGGGGGGGYSTHITTVYGGGVTPMPYYPAPSPMYDPYVQDPLPT 184
            S G  S  SS G AA  GGG  GGY+       GG   P P  P P P        P P+
Sbjct: 1350 SSGGYSGGSSGGSAAGGGGGSSGGYT-------GGSAAPPPPPPPPPPPPPAPAPAPAPS 1402

Query: 185  STATRSAAYYGSTTYNEEDEDDSIGFIMAVLLGLNGYCAISEILRGLSADSSSGSSSGTW 364
            S      +  GS                    G +G  A         A + + SS G  
Sbjct: 1403 SGGYSGGSSGGSAAGGGGGSSG----------GYSGGSAAPPPPPPAPAPAPAPSSGGYS 1452

Query: 365  SGSSNGLAARG 397
             GSS G AA G
Sbjct: 1453 GGSSGGSAAGG 1463

 Score = 42.0 bits (97), Expect = 0.005
 Identities = 30/75 (40%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = +2

Query: 5    SRGTRSAASSAGGAAALGGGGGGGYSTHITTVYGGGVTPMPYYPAPSPMYDPYVQDPLPT 184
            S G  S ASS G AA  GGG  GGYS       GG   P P  P P P   P    P P 
Sbjct: 940  SSGGYSGASSGGSAAGGGGGSSGGYS-------GGSAAPPPPPPPPPP---PPPPPPAPA 989

Query: 185  -STATRSAAYYGSTT 226
             + A  S  Y G ++
Sbjct: 990  PAPAPSSGGYSGGSS 1004

 Score = 40.8 bits (94), Expect(2) = 3e-04
 Identities = 39/132 (29%), Positives = 47/132 (35%), Gaps = 8/132 (6%)
 Frame = +2

Query: 5    SRGTRSAASSAGGAAALGGGGGGGYSTHITTV--------YGGGVTPMPYYPAPSPMYDP 160
            S G  S  SS G AA  GGG  GGYS   ++         Y GG   +P  P P P   P
Sbjct: 869  SSGGYSGGSSGGSAAGGGGGSSGGYSGGSSSGGGGGSSGGYSGGSAALPPPPPPPPPPPP 928

Query: 161  YVQDPLPTSTATRSAAYYGSTTYNEEDEDDSIGFIMAVLLGLNGYCAISEILRGLSADSS 340
                P P + A  S  Y G+++                               G SA   
Sbjct: 929  PPPAPAP-APAPSSGGYSGASS-------------------------------GGSAAGG 956

Query: 341  SGSSSGTWSGSS 376
             G SSG +SG S
Sbjct: 957  GGGSSGGYSGGS 968

 Score = 40.4 bits (93), Expect(2) = 4e-04
 Identities = 39/124 (31%), Positives = 42/124 (33%)
 Frame = +2

Query: 5    SRGTRSAASSAGGAAALGGGGGGGYSTHITTVYGGGVTPMPYYPAPSPMYDPYVQDPLPT 184
            S G  S  SS G AA  GGG  GGYS       GG   P P  P P P   P    P P 
Sbjct: 1044 SSGGYSGGSSGGSAAGGGGGSSGGYS-------GGSTAPPP--PPPPPPPPPPAPAPAP- 1093

Query: 185  STATRSAAYYGSTTYNEEDEDDSIGFIMAVLLGLNGYCAISEILRGLSADSSSGSSSGTW 364
              A  S  Y G ++                               G SA    G SSG +
Sbjct: 1094 --APSSGGYSGGSS-------------------------------GGSAAGGGGGSSGGY 1120

Query: 365  SGSS 376
            SG S
Sbjct: 1121 SGGS 1124

 Score = 40.0 bits (92), Expect(2) = 6e-04
 Identities = 39/124 (31%), Positives = 42/124 (33%)
 Frame = +2

Query: 5    SRGTRSAASSAGGAAALGGGGGGGYSTHITTVYGGGVTPMPYYPAPSPMYDPYVQDPLPT 184
            S G  S  SS G AA  GGG  GGYS       GG   P P  P P P   P    P P 
Sbjct: 1145 SSGGYSGGSSGGSAAGGGGGSSGGYS-------GGSAAPPPPPPPPPP---PPAPAPAP- 1193

Query: 185  STATRSAAYYGSTTYNEEDEDDSIGFIMAVLLGLNGYCAISEILRGLSADSSSGSSSGTW 364
              A  S  Y G ++                               G SA    G SSG +
Sbjct: 1194 --APSSGGYSGGSS-------------------------------GGSAAGGGGGSSGGY 1220

Query: 365  SGSS 376
            SG S
Sbjct: 1221 SGGS 1224

 Score = 40.0 bits (92), Expect = 0.019
 Identities = 29/74 (39%), Positives = 31/74 (41%)
 Frame = +2

Query: 5    SRGTRSAASSAGGAAALGGGGGGGYSTHITTVYGGGVTPMPYYPAPSPMYDPYVQDPLPT 184
            S G  S  SS G AA  GGG  GGYS       GG   P P  P P P   P    P P 
Sbjct: 1196 SSGGYSGGSSGGSAAGGGGGSSGGYS-------GGSAAPPPPPPPPPP---PPAPAPAP- 1244

Query: 185  STATRSAAYYGSTT 226
              A  S  Y G ++
Sbjct: 1245 --APSSGGYSGGSS 1256

 Score = 40.0 bits (92), Expect = 0.019
 Identities = 29/74 (39%), Positives = 31/74 (41%)
 Frame = +2

Query: 5    SRGTRSAASSAGGAAALGGGGGGGYSTHITTVYGGGVTPMPYYPAPSPMYDPYVQDPLPT 184
            S G  S  SS G AA  GGG  GGYS       GG   P P  P P P   P    P P 
Sbjct: 1299 SSGGYSGGSSGGSAAGGGGGSSGGYS-------GGSAAPPPPPPPPPP---PPAPAPAP- 1347

Query: 185  STATRSAAYYGSTT 226
              A  S  Y G ++
Sbjct: 1348 --APSSGGYSGGSS 1359

 Score = 39.7 bits (91), Expect = 0.025
 Identities = 28/72 (38%), Positives = 30/72 (40%)
 Frame = +2

Query: 5    SRGTRSAASSAGGAAALGGGGGGGYSTHITTVYGGGVTPMPYYPAPSPMYDPYVQDPLPT 184
            S G  S  SS G AA  GGG  GGYS       GG   P P  P P P   P    P P+
Sbjct: 1096 SSGGYSGGSSGGSAAGGGGGSSGGYS-------GGSAAPPPPPPPPPPAPAP---APAPS 1145

Query: 185  STATRSAAYYGS 220
            S      +  GS
Sbjct: 1146 SGGYSGGSSGGS 1157

 Score = 39.7 bits (91), Expect = 0.025
 Identities = 28/72 (38%), Positives = 30/72 (40%)
 Frame = +2

Query: 5    SRGTRSAASSAGGAAALGGGGGGGYSTHITTVYGGGVTPMPYYPAPSPMYDPYVQDPLPT 184
            S G  S  SS G AA  GGG  GGYS       GG   P P  P P P   P    P P+
Sbjct: 995  SSGGYSGGSSGGSAAGGGGGSSGGYS-------GGSAAPPPPPPPPPPAPAP---APAPS 1044

Query: 185  STATRSAAYYGS 220
            S      +  GS
Sbjct: 1045 SGGYSGGSSGGS 1056

 Score = 39.3 bits (90), Expect = 0.032
 Identities = 26/72 (36%), Positives = 29/72 (40%)
 Frame = +2

Query: 5    SRGTRSAASSAGGAAALGGGGGGGYSTHITTVYGGGVTPMPYYPAPSPMYDPYVQDPLPT 184
            S G  S  SS G AA  GGG  GGY+       GG   P P  P P P        P P+
Sbjct: 1447 SSGGYSGGSSGGSAAGGGGGSSGGYT-------GGSAAPPPPPPPPPPPPPAPAPAPAPS 1499

Query: 185  STATRSAAYYGS 220
            S      +  GS
Sbjct: 1500 SGGYSGGSSGGS 1511

 Score = 39.3 bits (90), Expect = 0.032
 Identities = 38/123 (30%), Positives = 42/123 (33%)
 Frame = +2

Query: 5    SRGTRSAASSAGGAAALGGGGGGGYSTHITTVYGGGVTPMPYYPAPSPMYDPYVQDPLPT 184
            S G  S  SS G AA  GGG  GGY+       GG   P P  P P P   P    P P 
Sbjct: 1499 SSGGYSGGSSGGSAAGGGGGSSGGYT-------GGSAAPPP--PPPPPPPPPPAPAPAP- 1548

Query: 185  STATRSAAYYGSTTYNEEDEDDSIGFIMAVLLGLNGYCAISEILRGLSADSSSGSSSGTW 364
              A  S  Y G ++                               G SA    G SSG +
Sbjct: 1549 --APSSGGYSGGSS-------------------------------GGSAAGGGGGSSGGY 1575

Query: 365  SGS 373
            SGS
Sbjct: 1576 SGS 1578

 Score = 39.3 bits (90), Expect = 0.032
 Identities = 26/72 (36%), Positives = 29/72 (40%)
 Frame = +2

Query: 5    SRGTRSAASSAGGAAALGGGGGGGYSTHITTVYGGGVTPMPYYPAPSPMYDPYVQDPLPT 184
            S G  S  SS G AA  GGG  GGY+       GG   P P  P P P        P P+
Sbjct: 1247 SSGGYSGGSSGGSAAGGGGGSSGGYT-------GGSAAPPPPPPPPPPPPPAPAPAPAPS 1299

Query: 185  STATRSAAYYGS 220
            S      +  GS
Sbjct: 1300 SGGYSGGSSGGS 1311

 Score = 38.9 bits (89), Expect(2) = 7e-04
 Identities = 42/133 (31%), Positives = 46/133 (34%)
 Frame = +2

Query: 2    SSRGTRSAASSAGGAAALGGGGGGGYSTHITTVYGGGVTPMPYYPAPSPMYDPYVQDPLP 181
            SSRG    +SS GG     GG  GGYS       GG   P P  P P P   P    P P
Sbjct: 824  SSRGYSEGSSSGGG-----GGSSGGYS-------GGSAAPPPPPPPPPPAPAPA---PAP 868

Query: 182  TSTATRSAAYYGSTTYNEEDEDDSIGFIMAVLLGLNGYCAISEILRGLSADSSSGSSSGT 361
            +S      +  GS                    G  G         G S   S GSSSG 
Sbjct: 869  SSGGYSGGSSGGSAA------------------GGGG---------GSSGGYSGGSSSGG 901

Query: 362  WSGSSNGLAARGA 400
              GSS G +   A
Sbjct: 902  GGGSSGGYSGGSA 914

 Score = 35.4 bits (80), Expect = 0.46
 Identities = 23/71 (32%), Positives = 28/71 (39%)
 Frame = +2

Query: 32  SAGGAAALGGGGGGGYSTHITTVYGGGVTPMPYYPAPSPMYDPYVQDPLPTSTATRSAAY 211
           S+GG+ A GGGGGGG S      Y     P P  P P P        P P      S  Y
Sbjct: 525 SSGGSYASGGGGGGGSSGGSGGGYSSAAAPPP--PPPPP--------PAPAPAPAPSGGY 574

Query: 212 YGSTTYNEEDE 244
                 + ++E
Sbjct: 575 ASGEVEDRQEE 585

 Score = 33.9 bits (76), Expect = 1.3
 Identities = 19/47 (40%), Positives = 20/47 (42%)
 Frame = -2

Query: 180  GSGSWTYGSYMGLGAG*YGIGVTPPPYTVVMWVE*PPPPPPPKAAAP 40
            G G  + G Y G      G    PPP         PPPPPPP A AP
Sbjct: 1314 GGGGGSSGGYSG------GSAAPPPP---------PPPPPPPPAPAP 1345

 Score = 33.9 bits (76), Expect = 1.3
 Identities = 19/47 (40%), Positives = 20/47 (42%)
 Frame = -2

Query: 180  GSGSWTYGSYMGLGAG*YGIGVTPPPYTVVMWVE*PPPPPPPKAAAP 40
            G G  + G Y G      G    PPP         PPPPPPP A AP
Sbjct: 1211 GGGGGSSGGYSG------GSAAPPPP---------PPPPPPPPAPAP 1242

 Score = 33.9 bits (76), Expect = 1.3
 Identities = 19/47 (40%), Positives = 20/47 (42%)
 Frame = -2

Query: 180  GSGSWTYGSYMGLGAG*YGIGVTPPPYTVVMWVE*PPPPPPPKAAAP 40
            G G  + G Y G      G    PPP         PPPPPPP A AP
Sbjct: 1160 GGGGGSSGGYSG------GSAAPPPP---------PPPPPPPPAPAP 1191

 Score = 33.9 bits (76), Expect = 1.3
 Identities = 20/52 (38%), Positives = 20/52 (38%)
 Frame = -2

Query: 177  SGSWTYGSYMGLGAG*YGIGVTPPPYTVVMWVE*PPPPPPPKAAAPPAELAA 22
            SG    G   G   G  G    PPP         PPPPPPP    PPA   A
Sbjct: 949  SGGSAAGGGGGSSGGYSGGSAAPPP---------PPPPPPPPPPPPPAPAPA 991

 Score = 32.7 bits (73), Expect = 3.0
 Identities = 18/48 (37%), Positives = 19/48 (39%)
 Frame = -2

Query: 177 SGSWTYGSYMGLGAG*YGIGVTPPPYTVVMWVE*PPPPPPPKAAAPPA 34
           SG    G   G   G Y     PPP         PPPPPPP  A  P+
Sbjct: 766 SGGGGGGGSSGGSGGRYSSAAAPPP---------PPPPPPPAPAPAPS 804

 Score = 32.3 bits (72), Expect = 3.9
 Identities = 19/49 (38%), Positives = 20/49 (40%)
 Frame = -2

Query: 180  GSGSWTYGSYMGLGAG*YGIGVTPPPYTVVMWVE*PPPPPPPKAAAPPA 34
            G G  + G Y G      G    PPP         PPPPPPP  A  PA
Sbjct: 1365 GGGGGSSGGYTG------GSAAPPPPPP-------PPPPPPPAPAPAPA 1400

 Score = 32.3 bits (72), Expect = 3.9
 Identities = 19/49 (38%), Positives = 20/49 (40%)
 Frame = -2

Query: 180  GSGSWTYGSYMGLGAG*YGIGVTPPPYTVVMWVE*PPPPPPPKAAAPPA 34
            G G  + G Y G      G    PPP         PPPPPPP  A  PA
Sbjct: 1262 GGGGGSSGGYTG------GSAAPPPPPP-------PPPPPPPAPAPAPA 1297

 Score = 32.3 bits (72), Expect = 3.9
 Identities = 19/49 (38%), Positives = 20/49 (40%)
 Frame = -2

Query: 180  GSGSWTYGSYMGLGAG*YGIGVTPPPYTVVMWVE*PPPPPPPKAAAPPA 34
            G G  + G Y G      G    PPP         PPPPPPP  A  PA
Sbjct: 1462 GGGGGSSGGYTG------GSAAPPPPPP-------PPPPPPPAPAPAPA 1497

 Score = 32.3 bits (72), Expect = 3.9
 Identities = 19/48 (39%), Positives = 19/48 (39%)
 Frame = -2

Query: 177  SGSWTYGSYMGLGAG*YGIGVTPPPYTVVMWVE*PPPPPPPKAAAPPA 34
            SG    G   G   G  G    PPP         PPPPPPP  A  PA
Sbjct: 1154 SGGSAAGGGGGSSGGYSGGSAAPPP---------PPPPPPPPPAPAPA 1192

 Score = 32.3 bits (72), Expect = 3.9
 Identities = 19/48 (39%), Positives = 19/48 (39%)
 Frame = -2

Query: 177  SGSWTYGSYMGLGAG*YGIGVTPPPYTVVMWVE*PPPPPPPKAAAPPA 34
            SG    G   G   G  G    PPP         PPPPPPP  A  PA
Sbjct: 1105 SGGSAAGGGGGSSGGYSGGSAAPPP---------PPPPPPPAPAPAPA 1143

 Score = 32.3 bits (72), Expect = 3.9
 Identities = 20/46 (43%), Positives = 24/46 (51%)
 Frame = -2

Query: 177  SGSWTYGSYMGLGAG*YGIGVTPPPYTVVMWVE*PPPPPPPKAAAP 40
            SG ++ GS  G  AG  G G +   Y+       PPPPPPP A AP
Sbjct: 1097 SGGYSGGSSGGSAAG--GGGGSSGGYSGGSAAPPPPPPPPPPAPAP 1140

 Score = 32.3 bits (72), Expect = 3.9
 Identities = 19/48 (39%), Positives = 19/48 (39%)
 Frame = -2

Query: 177  SGSWTYGSYMGLGAG*YGIGVTPPPYTVVMWVE*PPPPPPPKAAAPPA 34
            SG    G   G   G  G    PPP         PPPPPPP  A  PA
Sbjct: 1004 SGGSAAGGGGGSSGGYSGGSAAPPP---------PPPPPPPAPAPAPA 1042

 Score = 32.3 bits (72), Expect = 3.9
 Identities = 20/46 (43%), Positives = 24/46 (51%)
 Frame = -2

Query: 177  SGSWTYGSYMGLGAG*YGIGVTPPPYTVVMWVE*PPPPPPPKAAAP 40
            SG ++ GS  G  AG  G G +   Y+       PPPPPPP A AP
Sbjct: 996  SGGYSGGSSGGSAAG--GGGGSSGGYSGGSAAPPPPPPPPPPAPAP 1039

 Score = 32.3 bits (72), Expect = 3.9
 Identities = 19/49 (38%), Positives = 20/49 (40%)
 Frame = -2

Query: 180  GSGSWTYGSYMGLGAG*YGIGVTPPPYTVVMWVE*PPPPPPPKAAAPPA 34
            G G  + G Y G      G    PPP         PPPPPPP  A  PA
Sbjct: 1514 GGGGGSSGGYTG------GSAAPPPPPP-------PPPPPPPAPAPAPA 1549

 Score = 32.0 bits (71), Expect = 5.1
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +2

Query: 32  SAGGAAALGGGGGGGYSTHITTVYGGG 112
           S+GG  A GGGGGGGY++      GGG
Sbjct: 444 SSGGGYASGGGGGGGYASGGGGGAGGG 470

 Score = 32.0 bits (71), Expect = 5.1
 Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
 Frame = -2

Query: 177  SGSWTYGSYMGLG---AG*YGIGVTPPPYTVVMWVE*PPPPPPPKAAAPPAELAAERVP 10
            SG+ + GS  G G   +G Y  G   PP         PPPPPPP    PP   A    P
Sbjct: 945  SGASSGGSAAGGGGGSSGGYSGGSAAPP---------PPPPPPPPPPPPPPAPAPAPAP 994

 Score = 31.6 bits (70), Expect = 6.7
 Identities = 19/53 (35%), Positives = 20/53 (36%)
 Frame = -2

Query: 180  GSGSWTYGSYMGLGAG*YGIGVTPPPYTVVMWVE*PPPPPPPKAAAPPAELAA 22
            G G  + G Y G      G    PPP          PPPPPP    PPA   A
Sbjct: 900  GGGGGSSGGYSG------GSAALPPP----------PPPPPPPPPPPPAPAPA 936

 Score = 31.6 bits (70), Expect = 6.7
 Identities = 19/49 (38%), Positives = 20/49 (40%)
 Frame = -2

Query: 180 GSGSWTYGSYMGLGAG*YGIGVTPPPYTVVMWVE*PPPPPPPKAAAPPA 34
           G G  + G Y G  A        PPP         PPPPPPP  A  PA
Sbjct: 835 GGGGGSSGGYSGGSAA-------PPP---------PPPPPPPAPAPAPA 867

 Score = 31.6 bits (70), Expect = 6.7
 Identities = 21/52 (40%), Positives = 24/52 (45%)
 Frame = -2

Query: 177  SGSWTYGSYMGLGAG*YGIGVTPPPYTVVMWVE*PPPPPPPKAAAPPAELAA 22
            SG ++ GS  G  AG  G G +   YT       PPPPPPP     PA   A
Sbjct: 1500 SGGYSGGSSGGSAAG--GGGGSSGGYTGGSAAPPPPPPPPPPPPPAPAPAPA 1549

 Score = 31.6 bits (70), Expect = 6.7
 Identities = 21/52 (40%), Positives = 24/52 (45%)
 Frame = -2

Query: 177  SGSWTYGSYMGLGAG*YGIGVTPPPYTVVMWVE*PPPPPPPKAAAPPAELAA 22
            SG ++ GS  G  AG  G G +   YT       PPPPPPP     PA   A
Sbjct: 1448 SGGYSGGSSGGSAAG--GGGGSSGGYTGGSAAPPPPPPPPPPPPPAPAPAPA 1497

 Score = 31.6 bits (70), Expect = 6.7
 Identities = 21/52 (40%), Positives = 24/52 (45%)
 Frame = -2

Query: 177  SGSWTYGSYMGLGAG*YGIGVTPPPYTVVMWVE*PPPPPPPKAAAPPAELAA 22
            SG ++ GS  G  AG  G G +   YT       PPPPPPP     PA   A
Sbjct: 1351 SGGYSGGSSGGSAAG--GGGGSSGGYTGGSAAPPPPPPPPPPPPPAPAPAPA 1400

 Score = 31.6 bits (70), Expect = 6.7
 Identities = 21/52 (40%), Positives = 24/52 (45%)
 Frame = -2

Query: 177  SGSWTYGSYMGLGAG*YGIGVTPPPYTVVMWVE*PPPPPPPKAAAPPAELAA 22
            SG ++ GS  G  AG  G G +   YT       PPPPPPP     PA   A
Sbjct: 1248 SGGYSGGSSGGSAAG--GGGGSSGGYTGGSAAPPPPPPPPPPPPPAPAPAPA 1297

 Score = 31.6 bits (70), Expect = 6.7
 Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
 Frame = -2

Query: 177  SGSWTYGSYMGLG---AG*YGIGVTPPPYTVVMWVE*PPPPPPPKAAAPPAELAA 22
            SG  + GS  G G   +G Y  G T PP         PPPPPPP     PA   A
Sbjct: 1049 SGGSSGGSAAGGGGGSSGGYSGGSTAPP---------PPPPPPPPPPPAPAPAPA 1094

 Score = 31.6 bits (70), Expect = 6.7
 Identities = 24/85 (28%), Positives = 34/85 (39%)
 Frame = +2

Query: 2   SSRGTRSAASSAGGAAALGGGGGGGYSTHITTVYGGGVTPMPYYPAPSPMYDPYVQDPLP 181
           SS G  + +S  GG  A GGGGG    ++ +   GGG +        S    P    P P
Sbjct: 502 SSGGGYAKSSGGGGGYASGGGGGSSGGSYASGGGGGGGSSGGSGGGYSSAAAPPPPPPPP 561

Query: 182 TSTATRSAAYYGSTTYNEEDEDDSI 256
            + A   A   G  +   ED  + +
Sbjct: 562 PAPAPAPAPSGGYASGEVEDRQEEV 586

 Score = 31.2 bits (69), Expect = 8.7
 Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = -2

Query: 177 SGSWTYGSYMGLG---AG*YGIGVTPPPYTVVMWVE*PPPPPPPKAAAP 40
           S  ++ GS  G G   +G Y  G   PP         PPPPPPP A AP
Sbjct: 825 SRGYSEGSSSGGGGGSSGGYSGGSAAPP---------PPPPPPPPAPAP 864

 Score = 26.2 bits (56), Expect(2) = 9e-06
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +1

Query: 391 AGGAGGRVPG-AGGSAGVGEGGAAG 462
           AGG GG   G +GGS+  G GG++G
Sbjct: 883 AGGGGGSSGGYSGGSSSGGGGGSSG 907

 Score = 25.0 bits (53), Expect(2) = 7e-04
 Identities = 11/24 (45%), Positives = 13/24 (53%)
 Frame = +1

Query: 388  GAGGAGGRVPGAGGSAGVGEGGAA 459
            GA   G    G GGS+G   GG+A
Sbjct: 946  GASSGGSAAGGGGGSSGGYSGGSA 969

 Score = 24.3 bits (51), Expect(2) = 6e-04
 Identities = 12/27 (44%), Positives = 16/27 (58%)
 Frame = +1

Query: 382  PGGAGGAGGRVPGAGGSAGVGEGGAAG 462
            P   G +GG    +GGSA  G GG++G
Sbjct: 1246 PSSGGYSGG---SSGGSAAGGGGGSSG 1269

 Score = 24.3 bits (51), Expect(2) = 3e-04
 Identities = 12/27 (44%), Positives = 16/27 (58%)
 Frame = +1

Query: 382  PGGAGGAGGRVPGAGGSAGVGEGGAAG 462
            P   G +GG    +GGSA  G GG++G
Sbjct: 994  PSSGGYSGG---SSGGSAAGGGGGSSG 1017

 Score = 24.3 bits (51), Expect(2) = 4e-04
 Identities = 12/27 (44%), Positives = 16/27 (58%)
 Frame = +1

Query: 382  PGGAGGAGGRVPGAGGSAGVGEGGAAG 462
            P   G +GG    +GGSA  G GG++G
Sbjct: 1144 PSSGGYSGG---SSGGSAAGGGGGSSG 1167

 Score = 24.3 bits (51), Expect(2) = 1e-04
 Identities = 12/27 (44%), Positives = 16/27 (58%)
 Frame = +1

Query: 382  PGGAGGAGGRVPGAGGSAGVGEGGAAG 462
            P   G +GG    +GGSA  G GG++G
Sbjct: 1498 PSSGGYSGG---SSGGSAAGGGGGSSG 1521

>pir||S21961 proline-rich protein APG - Arabidopsis thaliana
           gi|22599|emb|CAA42925.1| APG [Arabidopsis thaliana]
          Length = 534

 Score = 50.4 bits (119), Expect = 1e-05
 Identities = 22/38 (57%), Positives = 26/38 (67%), Gaps = 1/38 (2%)
 Frame = -3

Query: 494 CPPTQPARRCRPAAPPSPTPALPPAPGTRP-PAPPAPP 384
           CPPT P  + +PA PP+P PA PPAP   P P+PP PP
Sbjct: 125 CPPTPPKPQPKPAPPPAPKPAPPPAPKPVPCPSPPKPP 162

 Score = 42.0 bits (97), Expect = 0.005
 Identities = 18/39 (46%), Positives = 22/39 (56%)
 Frame = -3

Query: 500 CVCPPTQPARRCRPAAPPSPTPALPPAPGTRPPAPPAPP 384
           C  PP +P  +  PA  PSP P+ PP P  +P  PPA P
Sbjct: 88  CPSPPPKPQPKPPPAPSPSPCPSPPPKPQPKPVPPPACP 126

 Score = 38.1 bits (87), Expect = 0.071
 Identities = 19/46 (41%), Positives = 23/46 (49%), Gaps = 5/46 (10%)
 Frame = -3

Query: 500 CVCPPTQPARRCRP----AAPPSPTPALPPAPGTRP-PAPPAPPGR 378
           C  PP  PA   +P      PP P PA  PAP  +P P+PP P  +
Sbjct: 155 CPSPPKPPAPTPKPVPPHGPPPKPAPAPTPAPSPKPAPSPPKPENK 200

 Score = 37.7 bits (86), Expect = 0.093
 Identities = 17/40 (42%), Positives = 20/40 (49%), Gaps = 1/40 (2%)
 Frame = -3

Query: 491 PPTQPARRCRPAAPPSPTPALPPAPGTRPPAPPAP-PGRC 375
           P   P    +P APP P+P   P P  +P  PPAP P  C
Sbjct: 69  PVAPPGPSPKPVAPPGPSPCPSPPPKPQPKPPPAPSPSPC 108

 Score = 37.0 bits (84), Expect = 0.16
 Identities = 16/35 (45%), Positives = 17/35 (47%)
 Frame = -3

Query: 491 PPTQPARRCRPAAPPSPTPALPPAPGTRPPAPPAP 387
           P  QP     P   PSP P  PP P  +P APP P
Sbjct: 51  PYPQPWPMNPPTPDPSPKPVAPPGPSPKPVAPPGP 85

 Score = 37.0 bits (84), Expect = 0.16
 Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 7/45 (15%)
 Frame = -3

Query: 500 CVCPPTQPARR------CRPAAP-PSPTPALPPAPGTRPPAPPAP 387
           C  PP +P  +      C P  P P P PA PPAP   PP  P P
Sbjct: 108 CPSPPPKPQPKPVPPPACPPTPPKPQPKPAPPPAPKPAPPPAPKP 152

 Score = 34.7 bits (78), Expect = 0.79
 Identities = 18/37 (48%), Positives = 19/37 (50%), Gaps = 2/37 (5%)
 Frame = -3

Query: 491 PPTQPARRCRPAAPP--SPTPALPPAPGTRPPAPPAP 387
           PPT P    +P APP  SP P  PP P   P  PP P
Sbjct: 60  PPT-PDPSPKPVAPPGPSPKPVAPPGPSPCPSPPPKP 95

 Score = 34.3 bits (77), Expect = 1.0
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -3

Query: 491 PPTQPARRCRPAAPPSPTPALPPAPGTRP-PAPPAPP 384
           P   P     P+ PP P P  PPAP   P P+PP  P
Sbjct: 79  PVAPPGPSPCPSPPPKPQPKPPPAPSPSPCPSPPPKP 115

 Score = 32.7 bits (73), Expect = 3.0
 Identities = 15/35 (42%), Positives = 17/35 (47%)
 Frame = -3

Query: 491 PPTQPARRCRPAAPPSPTPALPPAPGTRPPAPPAP 387
           PP  P+    P+ PP P P   P P   PP PP P
Sbjct: 99  PPPAPSPSPCPSPPPKPQPKPVPPPAC-PPTPPKP 132

 Score = 32.3 bits (72), Expect = 3.9
 Identities = 15/37 (40%), Positives = 16/37 (42%)
 Frame = -3

Query: 494 CPPTQPARRCRPAAPPSPTPALPPAPGTRPPAPPAPP 384
           CP   P    +P   P P PA PP P    P P  PP
Sbjct: 108 CPSPPP----KPQPKPVPPPACPPTPPKPQPKPAPPP 140

>pir||A86335 T20H2.9 protein - Arabidopsis thaliana
           gi|8778985|gb|AAF79900.1|AC022472_9 Contains a strong
           similarity to Anther-specific proline-rich protein APG
           precursor from Arabidopsis thaliana gi|728867 and
           contains a Lipase/Acylhydrolase domain with GDSL-like
           motif PF|00657.  ESTs gb|AV531882, gb|AV533240,
           gb|AV534374, gb|AV533394, gb|AV532582, gb|AV533541 come
           from this gene
          Length = 1137

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 22/38 (57%), Positives = 25/38 (64%), Gaps = 1/38 (2%)
 Frame = -3

Query: 494 CPPTQPARRCRPAAPPSPTPALPPAPGTRP-PAPPAPP 384
           CPPT P  + +PA PP P PA PPAP   P P+PP PP
Sbjct: 135 CPPTPPKPQPKPAPPPEPKPAPPPAPKPVPCPSPPKPP 172

 Score = 42.0 bits (97), Expect = 0.005
 Identities = 18/39 (46%), Positives = 22/39 (56%)
 Frame = -3

Query: 500 CVCPPTQPARRCRPAAPPSPTPALPPAPGTRPPAPPAPP 384
           C  PP +P  +  PA  PSP P+ PP P  +P  PPA P
Sbjct: 98  CPSPPPKPQPKPPPAPSPSPCPSPPPKPQPKPVPPPACP 136

 Score = 38.5 bits (88), Expect = 0.055
 Identities = 17/40 (42%), Positives = 20/40 (49%), Gaps = 1/40 (2%)
 Frame = -3

Query: 491 PPTQPARRCRPAAPPSPTPALPPAPGTRPPAPPAP-PGRC 375
           P   P    +P APP P+P   P P  +P  PPAP P  C
Sbjct: 79  PVAPPGPSSKPVAPPGPSPCPSPPPKPQPKPPPAPSPSPC 118

 Score = 38.1 bits (87), Expect = 0.071
 Identities = 19/46 (41%), Positives = 23/46 (49%), Gaps = 5/46 (10%)
 Frame = -3

Query: 500 CVCPPTQPARRCRP----AAPPSPTPALPPAPGTRP-PAPPAPPGR 378
           C  PP  PA   +P      PP P PA  PAP  +P P+PP P  +
Sbjct: 165 CPSPPKPPAPTPKPVPPHGPPPKPAPAPTPAPSPKPAPSPPKPENK 210

 Score = 37.7 bits (86), Expect = 0.093
 Identities = 16/35 (45%), Positives = 18/35 (50%)
 Frame = -3

Query: 491 PPTQPARRCRPAAPPSPTPALPPAPGTRPPAPPAP 387
           P  QP     P   PSP P  PP P ++P APP P
Sbjct: 61  PYPQPWPMNPPTPDPSPKPVAPPGPSSKPVAPPGP 95

 Score = 34.3 bits (77), Expect = 1.0
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -3

Query: 491 PPTQPARRCRPAAPPSPTPALPPAPGTRP-PAPPAPP 384
           P   P     P+ PP P P  PPAP   P P+PP  P
Sbjct: 89  PVAPPGPSPCPSPPPKPQPKPPPAPSPSPCPSPPPKP 125

 Score = 33.9 bits (76), Expect = 1.3
 Identities = 17/37 (45%), Positives = 19/37 (50%), Gaps = 2/37 (5%)
 Frame = -3

Query: 491 PPTQPARRCRPAAPPSPT--PALPPAPGTRPPAPPAP 387
           PPT P    +P APP P+  P  PP P   P  PP P
Sbjct: 70  PPT-PDPSPKPVAPPGPSSKPVAPPGPSPCPSPPPKP 105

 Score = 33.1 bits (74), Expect = 2.3
 Identities = 14/36 (38%), Positives = 18/36 (49%)
 Frame = -3

Query: 494 CPPTQPARRCRPAAPPSPTPALPPAPGTRPPAPPAP 387
           CP   P  + +P  PP+  P  PP P  +P  PP P
Sbjct: 118 CPSPPPKPQPKPVPPPA-CPPTPPKPQPKPAPPPEP 152

 Score = 32.7 bits (73), Expect = 3.0
 Identities = 15/35 (42%), Positives = 17/35 (47%)
 Frame = -3

Query: 491 PPTQPARRCRPAAPPSPTPALPPAPGTRPPAPPAP 387
           PP  P+    P+ PP P P   P P   PP PP P
Sbjct: 109 PPPAPSPSPCPSPPPKPQPKPVPPPAC-PPTPPKP 142

>sp|P40602|APG_ARATH Anter-specific proline-rich protein APG precursor
           gi|16604458|gb|AAL24235.1| At1g20130/T20H2_9
           [Arabidopsis thaliana] gi|30725276|gb|AAP37660.1|
           At1g20130/T20H2_9 [Arabidopsis thaliana]
          Length = 534

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 22/38 (57%), Positives = 25/38 (64%), Gaps = 1/38 (2%)
 Frame = -3

Query: 494 CPPTQPARRCRPAAPPSPTPALPPAPGTRP-PAPPAPP 384
           CPPT P  + +PA PP P PA PPAP   P P+PP PP
Sbjct: 125 CPPTPPKPQPKPAPPPEPKPAPPPAPKPVPCPSPPKPP 162

 Score = 42.0 bits (97), Expect = 0.005
 Identities = 18/39 (46%), Positives = 22/39 (56%)
 Frame = -3

Query: 500 CVCPPTQPARRCRPAAPPSPTPALPPAPGTRPPAPPAPP 384
           C  PP +P  +  PA  PSP P+ PP P  +P  PPA P
Sbjct: 88  CPSPPPKPQPKPPPAPSPSPCPSPPPKPQPKPVPPPACP 126

 Score = 38.5 bits (88), Expect = 0.055
 Identities = 17/40 (42%), Positives = 20/40 (49%), Gaps = 1/40 (2%)
 Frame = -3

Query: 491 PPTQPARRCRPAAPPSPTPALPPAPGTRPPAPPAP-PGRC 375
           P   P    +P APP P+P   P P  +P  PPAP P  C
Sbjct: 69  PVAPPGPSSKPVAPPGPSPCPSPPPKPQPKPPPAPSPSPC 108

 Score = 38.1 bits (87), Expect = 0.071
 Identities = 19/46 (41%), Positives = 23/46 (49%), Gaps = 5/46 (10%)
 Frame = -3

Query: 500 CVCPPTQPARRCRP----AAPPSPTPALPPAPGTRP-PAPPAPPGR 378
           C  PP  PA   +P      PP P PA  PAP  +P P+PP P  +
Sbjct: 155 CPSPPKPPAPTPKPVPPHGPPPKPAPAPTPAPSPKPAPSPPKPENK 200

 Score = 37.7 bits (86), Expect = 0.093
 Identities = 16/35 (45%), Positives = 18/35 (50%)
 Frame = -3

Query: 491 PPTQPARRCRPAAPPSPTPALPPAPGTRPPAPPAP 387
           P  QP     P   PSP P  PP P ++P APP P
Sbjct: 51  PYPQPWPMNPPTPDPSPKPVAPPGPSSKPVAPPGP 85

 Score = 34.3 bits (77), Expect = 1.0
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -3

Query: 491 PPTQPARRCRPAAPPSPTPALPPAPGTRP-PAPPAPP 384
           P   P     P+ PP P P  PPAP   P P+PP  P
Sbjct: 79  PVAPPGPSPCPSPPPKPQPKPPPAPSPSPCPSPPPKP 115

 Score = 33.9 bits (76), Expect = 1.3
 Identities = 17/37 (45%), Positives = 19/37 (50%), Gaps = 2/37 (5%)
 Frame = -3

Query: 491 PPTQPARRCRPAAPPSPT--PALPPAPGTRPPAPPAP 387
           PPT P    +P APP P+  P  PP P   P  PP P
Sbjct: 60  PPT-PDPSPKPVAPPGPSSKPVAPPGPSPCPSPPPKP 95

 Score = 33.1 bits (74), Expect = 2.3
 Identities = 14/36 (38%), Positives = 18/36 (49%)
 Frame = -3

Query: 494 CPPTQPARRCRPAAPPSPTPALPPAPGTRPPAPPAP 387
           CP   P  + +P  PP+  P  PP P  +P  PP P
Sbjct: 108 CPSPPPKPQPKPVPPPA-CPPTPPKPQPKPAPPPEP 142

 Score = 32.7 bits (73), Expect = 3.0
 Identities = 15/35 (42%), Positives = 17/35 (47%)
 Frame = -3

Query: 491 PPTQPARRCRPAAPPSPTPALPPAPGTRPPAPPAP 387
           PP  P+    P+ PP P P   P P   PP PP P
Sbjct: 99  PPPAPSPSPCPSPPPKPQPKPVPPPAC-PPTPPKP 132



EST assemble image


clone accession position
1 MXL032b10_r BP094908 1 400
2 LCL085a02_r AV630837 225 532




Chlamydomonas reinhardtii
Kazusa DNA Research Institute