Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003307A_C01_2 KCC003307A_c01_2
(510 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00025420.1| COG0389: Nucleotidyltransferase/DNA polymeras... 42 0.006
ref|ZP_00092630.1| COG0810: Periplasmic protein TonB, links inne... 41 0.008
dbj|BAC40412.1| unnamed protein product [Mus musculus] 40 0.022
dbj|BAC87415.1| unnamed protein product [Homo sapiens] 39 0.049
dbj|BAC98752.1| hypothetical protein [Oryza sativa (japonica cul... 39 0.049
>ref|ZP_00025420.1| COG0389: Nucleotidyltransferase/DNA polymerase involved in DNA
repair [Ralstonia metallidurans]
Length = 748
Score = 41.6 bits (96), Expect = 0.006
Identities = 26/63 (41%), Positives = 29/63 (45%), Gaps = 9/63 (14%)
Frame = +3
Query: 120 WRNR--RSCKMNSSKQERRYARCWHLRTRRRTLRTSGTTGTWR-------SCCGRGSCCY 272
WR R R C RR ARCW +RRR R G WR CCGR +CC
Sbjct: 56 WRGRPSRCCAA------RRSARCWS-GSRRRGQRRCGVCRCWRRPAIPWCGCCGRSACCT 108
Query: 273 SRR 281
+RR
Sbjct: 109 NRR 111
>ref|ZP_00092630.1| COG0810: Periplasmic protein TonB, links inner and outer membranes
[Azotobacter vinelandii]
Length = 286
Score = 41.2 bits (95), Expect = 0.008
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 9/124 (7%)
Frame = +2
Query: 101 ASGPWKMEEQEKLQNELIETGAEIRKVLASADSAENAEDKRYYRDMALVLRKRELLLFEA 280
A+GPW + + E+ + GA +R+ L S A A D R LR+RE LL A
Sbjct: 11 AAGPWP---EADISGEVPDFGAPVRRALGSVRFA--APDTR-------PLRRREALLLGA 58
Query: 281 LQARGRAAMAAGLGVESATP---------PHTVHAAGPVQPPPPDLPPQTNPTTAYLEDC 433
L A LG SA P P T+ + P P P P P A E
Sbjct: 59 LALALHAGALHWLGRHSAPPLPEVPVQIPPMTIEFSSPAPPAEPVEPTPPPPAVAAPEPP 118
Query: 434 LKPP 445
PP
Sbjct: 119 PPPP 122
>dbj|BAC40412.1| unnamed protein product [Mus musculus]
Length = 361
Score = 39.7 bits (91), Expect = 0.022
Identities = 24/58 (41%), Positives = 32/58 (54%), Gaps = 3/58 (5%)
Frame = -2
Query: 287 LAAPRIAAA--PSSAARAPCPCSTACPQRSP-PSPQMPTPCVSPLLFR*VHFAASPVP 123
+A+P + A+ P+SAA AP P TA P +P PS PTP +P AA+P P
Sbjct: 1 MASPAVPASVPPASAAAAPAPAVTAAPASAPTPSTPAPTPAATP--------AAAPAP 50
>dbj|BAC87415.1| unnamed protein product [Homo sapiens]
Length = 141
Score = 38.5 bits (88), Expect = 0.049
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 10/89 (11%)
Frame = +1
Query: 229 QGHGARAAEEGAAAIRGAASARSCSYGSWPGRGERDTTPHRSRGWP----------RPAA 378
+ R +G A+ ++ S G PG + P + G P RPA+
Sbjct: 24 EARAGRVGAQGGVALLFPSALPSGPGGQDPGASGWEPPPVGAPGSPAAPQSRGNAVRPAS 83
Query: 379 PT*PTAPNEPYNRLPGGLPETPRCWPWHV 465
P+A + +R+ GGLP R WPW V
Sbjct: 84 VLLPSACGQRTSRITGGLPAPDRKWPWQV 112
>dbj|BAC98752.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 201
Score = 38.5 bits (88), Expect = 0.049
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = -2
Query: 329 SPRPGQLP*LHDRALAAPRIAAAPSSAARAPCPCSTACPQRSPPSPQMPTPCVSP 165
SPRP LP A+ + + + SAAR S +CP+R+P SP P VSP
Sbjct: 12 SPRPPSLP---SDAIKSSLVLRSSVSAARRSLSPSVSCPRRAPLSPPSPLSSVSP 63
