>KCC003306A_C01 KCC003306A_c01
ctattgcgcgcactggcgatgttcctcaagtaccagcggtgcacacgcgagtgaaggtgc
cgaccaGTTACGGGCGCCGGCCTTTCTGCTGATAACTTAAGAACAGATATTGCTCGTCGA
GGATCGTAGTATCGGTTTGACAACCAGGAGCTAAGCGCAGACGAGAACTCCCGAGTAACT
TTTGAACTCACGCTCCAGAACTCGACGGACGGCTCGAATCGATCACAATCACCTAGTACA
CTCTAAGAACACGTCGGTGGCCGTGTGAAGGCCCTAGCTCAGCGCAAAATTACCTGCCGA
GGCTTGTTAATTTACGTTGTTTAGTGTCGCCAGCATCTGCATAAGATACAGATATGCGTT
TAATACGTGTGCCAGCTGCGGCACTACTACTGGCAGTCGGGGCGTGCCTTCTGAGCTTCG
CCCATGGCCAAGGGT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003306A_C01 KCC003306A_c01
         (435 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_499619.1| germline associated transcriptional repressor, ...    31  3.4
pir||S71796 centrosome-binding protein PIE-1, germline-associate...    31  3.4
pir||T27052 hypothetical protein Y49E10.14 - Caenorhabditis elegans    31  3.4
ref|NP_820291.1| hypothetical protein [Coxiella burnetii RSA 493...    31  4.5
pir||T07150 G-box binding factor 2A - soybean (fragment) gi|1699...    31  4.5

>ref|NP_499619.1| germline associated transcriptional repressor, embryonic cell fate
           determinant; inhibits somatic differentiation and blocks
           phosphorylation of the RNA polymerase II large subunit
           carboxy-terminal domain, Pharynx and Intestine in Excess
           PIE-1 (38.4 kD) (pie-1) [Caenorhabditis elegans]
           gi|2501220|sp|Q94131|PIE1_CAEEL Pharynx and intestine in
           excess protein 1 (Pie-1 protein)
           gi|1654336|gb|AAB17868.1| PIE-1 [Caenorhabditis elegans]
           gi|14530635|emb|CAB11564.2| C. elegans PIE-1 protein
           (corresponding sequence Y49E10.14) [Caenorhabditis
           elegans]
          Length = 335

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 16/43 (37%), Positives = 25/43 (57%), Gaps = 1/43 (2%)
 Frame = -2

Query: 182 KVTREFSSALSSWLSNRYYDPRR-AISVLKLSAERPAPVTGRH 57
           K+ R F+ +LSS  S ++  P+R A+ +  L+    AP T RH
Sbjct: 47  KINRSFNDSLSSGYSGKWLRPKREALKITPLAQIDEAPATKRH 89

>pir||S71796 centrosome-binding protein PIE-1, germline-associated -
           Caenorhabditis elegans
          Length = 335

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 16/43 (37%), Positives = 25/43 (57%), Gaps = 1/43 (2%)
 Frame = -2

Query: 182 KVTREFSSALSSWLSNRYYDPRR-AISVLKLSAERPAPVTGRH 57
           K+ R F+ +LSS  S ++  P+R A+ +  L+    AP T RH
Sbjct: 47  KINRSFNDSLSSGYSGKWLRPKREALKITPLAQIDEAPATKRH 89

>pir||T27052 hypothetical protein Y49E10.14 - Caenorhabditis elegans
          Length = 356

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 16/43 (37%), Positives = 25/43 (57%), Gaps = 1/43 (2%)
 Frame = -2

Query: 182 KVTREFSSALSSWLSNRYYDPRR-AISVLKLSAERPAPVTGRH 57
           K+ R F+ +LSS  S ++  P+R A+ +  L+    AP T RH
Sbjct: 47  KINRSFNDSLSSGYSGKWLRPKREALKITPLAQIDEAPATKRH 89

>ref|NP_820291.1| hypothetical protein [Coxiella burnetii RSA 493]
           gi|29541867|gb|AAO90805.1| hypothetical protein
           [Coxiella burnetii RSA 493]
          Length = 316

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
 Frame = -2

Query: 224 DRFEPSVEFWSVSS---KVTREFSSALSSWLSNRYYDPRRAISVLKLSAERPAPVTGRH 57
           D +  +   W + +   + +R+F   L SWL + Y +P  A    +L  +RP P    H
Sbjct: 5   DYYSSTSRHWHLGNEEIRKSRDFFEQLISWLKDAYPNPGFAAMFFQLLQQRPEPGKNEH 63

>pir||T07150 G-box binding factor 2A - soybean (fragment)
           gi|169959|gb|AAB00097.1| G-box binding factor
          Length = 423

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 18/49 (36%), Positives = 28/49 (56%)
 Frame = -2

Query: 185 SKVTREFSSALSSWLSNRYYDPRRAISVLKLSAERPAPVTGRHLHSRVH 39
           S+  R  +SAL   L N    PR  I++  + ++R APV+  +L SRV+
Sbjct: 333 SEQMRMENSALREKLINTQLGPREEITLSSIDSKRAAPVSTENLLSRVN 381

EST assemble image

clone accession position 1 LCL083h11_r AV630760 1 408 2 MXL063g08_r BP096726 67 435

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