Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003304A_C01 KCC003304A_c01
(457 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_058924.1| dentatorubral pallidoluysian atrophy [Rattus no... 43 0.002
emb|CAA61623.1| DRPLA [Rattus norvegicus] 41 0.007
ref|NP_774502.1| bll7862 [Bradyrhizobium japonicum] gi|27356146|... 39 0.027
pir||JW0067 chitinase (EC 3.2.1.14) A - Emericella nidulans 39 0.035
dbj|BAA36223.1| chitinase [Aspergillus nidulans] 39 0.035
>ref|NP_058924.1| dentatorubral pallidoluysian atrophy [Rattus norvegicus]
gi|1706520|sp|P54258|DRPL_RAT ATROPHIN-1
(DENTATORUBRAL-PALLIDOLUYSIAN ATROPHY PROTEIN)
gi|1049102|gb|AAA80337.1| atrophin-1 [Rattus norvegicus]
Length = 1183
Score = 42.7 bits (99), Expect = 0.002
Identities = 50/174 (28%), Positives = 63/174 (35%), Gaps = 32/174 (18%)
Frame = -1
Query: 451 AATSQQPASQMSPMHSHTH--------TDTPPTHTQ-TLRTGAVLTTCWDLVATAHTRPT 299
AATSQ PASQ P + H+ ++ PP +TQ +L + AV W P
Sbjct: 392 AATSQYPASQTLPSYPHSFPPPTSMSVSNQPPKYTQPSLPSQAV----WSQGPPPPPPPY 447
Query: 298 *RSSPADNT---PTTSSGNQDVVH------------DVPTPEKRPSQWLTGREGAPSPHF 164
R P +NT P +G Q H P P+ +P Q G G P P
Sbjct: 448 GRLLPNNNTHPGPFPPTGGQSTAHPPAPAHHHHQQQQQPQPQPQPQQHHHGNSGPPPP-- 505
Query: 163 GELQGAL*PHRKPLRTSHHVD--------GPTPSRTPAPAARQIRHAALPWPQA 26
GA PH SHH G P PA H + + QA
Sbjct: 506 ----GAY-PHPLESSNSHHAHPYNMSPSLGSLRPYPPGPAHLPPSHGQVSYSQA 554
>emb|CAA61623.1| DRPLA [Rattus norvegicus]
Length = 1182
Score = 40.8 bits (94), Expect = 0.007
Identities = 49/174 (28%), Positives = 63/174 (36%), Gaps = 32/174 (18%)
Frame = -1
Query: 451 AATSQQPASQMSPMHSHTH--------TDTPPTHTQ-TLRTGAVLTTCWDLVATAHTRPT 299
AATSQ PASQ P + H+ ++ PP +TQ +L + AV W P
Sbjct: 392 AATSQYPASQTLPSYPHSFPPPTSMSVSNQPPKYTQPSLPSQAV----WSQGPPPPPPPY 447
Query: 298 *RSSPADNT---PTTSSGNQDVVH------------DVPTPEKRPSQWLTGREGAPSPHF 164
R P ++T P +G Q H P P+ +P Q G G P P
Sbjct: 448 GRLLPNNSTHPGPFPPTGGQSTAHPPAPAHHHHQQQQQPQPQPQPQQHHHGNSGPPPP-- 505
Query: 163 GELQGAL*PHRKPLRTSHHVD--------GPTPSRTPAPAARQIRHAALPWPQA 26
GA PH SHH G P PA H + + QA
Sbjct: 506 ----GAY-PHPLESSNSHHAHPYNMSPSLGSLRPYPPGPAHLPPSHGQVSYSQA 554
>ref|NP_774502.1| bll7862 [Bradyrhizobium japonicum] gi|27356146|dbj|BAC53127.1|
bll7862 [Bradyrhizobium japonicum USDA 110]
Length = 356
Score = 38.9 bits (89), Expect = 0.027
Identities = 34/105 (32%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Frame = +2
Query: 5 DMLAVSCSLRPGQSGMADLPCSWGWRSGWSGAIHMMAS----AERLAVWSQGTLQLAKMR 172
D +AV L G+ G++ L +GW G A H AS ER AV G+ + A
Sbjct: 120 DAIAVQHRLLTGRFGISKLALVYGWSMGGMQAYHWAASHPDMVERAAVVC-GSARCAPYN 178
Query: 173 GWGALAARQPL-GRPLFRGGDIVNHVLIATAGCGRVVGGGAASRG 304
+ + L G P FR G V + GRV G A S G
Sbjct: 179 HVFLESVKAALTGDPAFRNGRFVEKPTVGYRAMGRVYAGWAMSHG 223
>pir||JW0067 chitinase (EC 3.2.1.14) A - Emericella nidulans
Length = 660
Score = 38.5 bits (88), Expect = 0.035
Identities = 33/121 (27%), Positives = 45/121 (36%), Gaps = 2/121 (1%)
Frame = -1
Query: 421 MSPMHSHTHTDTPPTHTQTLRTGAVLTTCWDLVATAHTRPT*RSSPADNTPTTS-SGNQD 245
+ P H T PT T + T + +T AT+ T T +S TPTTS +
Sbjct: 339 LDPNHPPPTTSPTPTPTPSTTTTSTTSTTSTTSATSTTSTTSTTSTTSTTPTTSTTSTTS 398
Query: 244 VVHDVPTPEKRPSQWLTGREGAPSPHFGELQGAL*PHRKPL-RTSHHVDGPTPSRTPAPA 68
P+P + T PSP + + L TS V TPS T P
Sbjct: 399 TTTPTPSPSPSTASSSTTETVTPSPKPSPSESSTTSETSSLPSTSTPVVSETPSETKTPT 458
Query: 67 A 65
+
Sbjct: 459 S 459
>dbj|BAA36223.1| chitinase [Aspergillus nidulans]
Length = 961
Score = 38.5 bits (88), Expect = 0.035
Identities = 33/121 (27%), Positives = 45/121 (36%), Gaps = 2/121 (1%)
Frame = -1
Query: 421 MSPMHSHTHTDTPPTHTQTLRTGAVLTTCWDLVATAHTRPT*RSSPADNTPTTS-SGNQD 245
+ P H T PT T + T + +T AT+ T T +S TPTTS +
Sbjct: 339 LDPNHPPPTTSPTPTPTPSTTTTSTTSTTSTTSATSTTSTTSTTSTTSTTPTTSTTSTTS 398
Query: 244 VVHDVPTPEKRPSQWLTGREGAPSPHFGELQGAL*PHRKPL-RTSHHVDGPTPSRTPAPA 68
P+P + T PSP + + L TS V TPS T P
Sbjct: 399 TTTPTPSPSPSTASSSTTETVTPSPKPSPSESSTTSETSSLPSTSTPVVSETPSETKTPT 458
Query: 67 A 65
+
Sbjct: 459 S 459
