Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003301A_C01 KCC003301A_c01
(382 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_213930.2| similar to PxF protein [Rattus norvegicus] 33 0.98
emb|CAB91287.2| related to NRD1 protein [Neurospora crassa] 33 1.3
pir||T49384 related to NRD1 protein [imported] - Neurospora crassa 33 1.3
ref|NP_825600.1| putative penicillin-binding protein [Streptomyc... 33 1.3
emb|CAB62382.1| chitinase [Arthrobacter sp.] 32 2.2
>ref|XP_213930.2| similar to PxF protein [Rattus norvegicus]
Length = 310
Score = 33.1 bits (74), Expect = 0.98
Identities = 23/79 (29%), Positives = 31/79 (39%)
Frame = +1
Query: 133 QSVHSARWIGSDSIEASAGAADVSQNPAQRQAPELLAGHVEYDLGTRTFKFIKAVVNVDK 312
Q H R +G + A+ G A R+ ELL A+ + DK
Sbjct: 5 QWFHLLRQVGGSKMAAAEGGCGAGVE-ADRELEELLES---------------ALDDFDK 48
Query: 313 RKPGPDPGPDFSCPNAAAP 369
KP P P P S P+A+ P
Sbjct: 49 AKPSPAPSPTISAPDASGP 67
>emb|CAB91287.2| related to NRD1 protein [Neurospora crassa]
Length = 739
Score = 32.7 bits (73), Expect = 1.3
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 382 RSRRRAPRRWDMRSRDRGRG 323
RSR R+PRRWD+R R RG
Sbjct: 416 RSRSRSPRRWDVRGSPRARG 435
>pir||T49384 related to NRD1 protein [imported] - Neurospora crassa
Length = 595
Score = 32.7 bits (73), Expect = 1.3
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 382 RSRRRAPRRWDMRSRDRGRG 323
RSR R+PRRWD+R R RG
Sbjct: 272 RSRSRSPRRWDVRGSPRARG 291
>ref|NP_825600.1| putative penicillin-binding protein [Streptomyces avermitilis
MA-4680] gi|29608080|dbj|BAC72135.1| putative
penicillin-binding protein [Streptomyces avermitilis
MA-4680]
Length = 540
Score = 32.7 bits (73), Expect = 1.3
Identities = 26/70 (37%), Positives = 35/70 (49%)
Frame = -3
Query: 365 AAALGHEKSGPGSGPGLRLSTLTTALMNLNVLVPKSYSTCPARSSGACR*AGFCETSAAP 186
A A+GH G GSGPG R TT+ L+V V ++ PA R A +T AP
Sbjct: 461 AGAVGHFSGGAGSGPGARTLWQTTSGGRLSVTV-ALFAEYPAAGKRPARPAHLPDT--AP 517
Query: 185 ADASMLSEPI 156
A+ L+E +
Sbjct: 518 YLAAGLTESV 527
>emb|CAB62382.1| chitinase [Arthrobacter sp.]
Length = 880
Score = 32.0 bits (71), Expect = 2.2
Identities = 16/44 (36%), Positives = 19/44 (42%), Gaps = 5/44 (11%)
Frame = +2
Query: 263 WARGHSNSSKPWSTWTNANQA-----PTPVPTSHVPTPRRPPAA 379
W + + S PW WT+ PTP PT PTP P A
Sbjct: 72 WTQNNVPGSDPWGPWTSQGTCGTVTDPTPTPT---PTPTPTPTA 112
