KCC003293A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003293A_C01 KCC003293A_c01
cgcgccagcatgctgcagctgggccgcagcgtcgaactgcagctctccttgcaccagatc
cttgcagatgtgcgctccatGGACGTCATCACCAAGAACAAGACCCTGCCAACTCTGTAC
ACCGCCGACGACTCCACGATGTTTTTGGATCGCATTGCTGTCAACGCGGAAAAGATGAAG
GATCGTCTGAACGACATTTTGGATAACCACCACGCCCGCGACAGCAGTGTCATGACCTTG
TTTTACTTCACAAACATCTCGGTCTGGAATGGACGGGAGCAAAACGGGAGCGACGCCTTC
ATAAACGTCACGATCTGGGATTTTGGAACGCGCATCTACTCAATGACCAAGCTGGTGCAG
CAGAGCGGCGCCCAATGGCTGGCAGACGGTGTTTCCTTTGTCGATCAGGACCCGGGCCAG
TTTCTCATCAAGTCAGGCCCCGACTTCTTCCGAGCCTCACGGCGGATCCTGGATGCGCTG
CTGTACGCCGCAGTGTGACAGCTGCCAAGCGGGTGAACACCCTGCAGCTGGTGTTCCTGG
CCGTGGAGGGCGCCGCCATCAGCTGCGCCGCCGCCTGCTACCTGGCCTACCTGCTGCGGG
CGGTGGCGGCGCAGCGGTACA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003293A_C01 KCC003293A_c01
         (621 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||A60095 larval glue protein Lgp-1 precursor - fruit fly (Dro...    44  0.002
ref|NP_523475.2| Salivary gland secretion 1 CG3047-PA [Drosophil...    39  0.047
gb|AAK31375.1|AC084329_1 ppg3 [Leishmania major]                       38  0.10
ref|XP_326844.1| hypothetical protein [Neurospora crassa] gi|127...    38  0.14
sp|Q62635|MUC2_RAT Mucin 2 precursor (Intestinal mucin 2) gi|108...    37  0.18

>pir||A60095 larval glue protein Lgp-1 precursor - fruit fly (Drosophila
           virilis) gi|433482|emb|CAA53796.1| major larval glue
           protein [Drosophila virilis] gi|450903|emb|CAA82672.1|
           glue protein [Drosophila virilis]
           gi|1091592|prf||2021274B glue protein
          Length = 232

 Score = 43.5 bits (101), Expect = 0.002
 Identities = 40/170 (23%), Positives = 64/170 (37%)
 Frame = +2

Query: 38  CSSPCTRSLQMCAPWTSSPRTRPCQLCTPPTTPRCFWIALLSTRKR*RIV*TTFWITTTP 217
           C +  T +   C   T++  T PC   T  TT  C      +T +      TT   TTT 
Sbjct: 48  CPTTTTTTTTPCPTTTTTTTTTPCPTTTTTTTTPC---PTTTTTRTTTTTTTTPCPTTTT 104

Query: 218 ATAVS*PCFTSQTSRSGMDGSKTGATPS*TSRSGILERASTQ*PSWCSRAAPNGWQTVFP 397
               + P  T++T+ +    ++T  TP+ T+R+      +T   +  +   P    T  P
Sbjct: 105 TRTTTTPTTTTRTTTTPTTTTRTTTTPTTTTRTTTTRTTTTPTTTTRTTTTPT---TTTP 161

Query: 398 LSIRTRASFSSSQAPTSSEPHGGSWMRCCTPQCDSCQAGEHPAAGVPGRG 547
            +     +  +   PT+ +P    W          C  G  P  G P RG
Sbjct: 162 TTTTQTTTTRAPPTPTTQKP----WC-----PWKPCGPGGKPCVGCPRRG 202

>ref|NP_523475.2| Salivary gland secretion 1 CG3047-PA [Drosophila melanogaster]
           gi|28380257|gb|AAF50957.3| CG3047-PA [Drosophila
           melanogaster]
          Length = 1225

 Score = 39.3 bits (90), Expect = 0.047
 Identities = 42/166 (25%), Positives = 59/166 (35%), Gaps = 3/166 (1%)
 Frame = +2

Query: 50  CTRSLQMCAPWTSSPRTRPCQLCTPP--TTPRCFWIALLSTRKR*RIV*TTFWITTTPAT 223
           CT +   CAP T++PR+      + P  TTPRC                TT   T +P  
Sbjct: 274 CTTTTSTCAPTTTTPRSTTTTTTSRPTTTTPRC----------------TTTTSTCSPTR 317

Query: 224 AVS*PCFTSQTSRSGMDGSKTGATPS*TSRSGILERASTQ*PSWCSRAAPNGWQTVFPLS 403
                  T+ TSR      +   TPS T       R +T  P   +    +G  T  P S
Sbjct: 318 TTPRSTTTTSTSRPTTTTPRCTTTPSTT----CTRRPTTTTPRSTTTTCTSGPTTTTPRS 373

Query: 404 IRTR-ASFSSSQAPTSSEPHGGSWMRCCTPQCDSCQAGEHPAAGVP 538
             T   S  ++  P S+     S     TP+  +  +   P    P
Sbjct: 374 TTTTCTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTP 419

 Score = 32.7 bits (73), Expect = 4.4
 Identities = 44/161 (27%), Positives = 58/161 (35%), Gaps = 2/161 (1%)
 Frame = +2

Query: 14   CSWAAASNCSSPCTRSLQMCAPWTSSPR--TRPCQLCTPPTTPRCFWIALLSTRKR*RIV 187
            C+    +      T +   C P T++PR  T  C  C   TTPR       S        
Sbjct: 874  CTSGPTTTTPRSTTTTCTSC-PTTTTPRSTTTTCTSCPTTTTPRSTTTTCTSGPTTTTPR 932

Query: 188  *TTFWITTTPATAVS*PCFTSQTSRSGMDGSKTGATPS*TSRSGILERASTQ*PSWCSRA 367
             TT   T  P T       T+ TSR      ++  T + TSR       ST  PS  SR 
Sbjct: 933  STTKTSTCAPTTTTPRSTTTTSTSRPTTTTPRSTTTTT-TSRPTTTTPRSTTTPS-TSRP 990

Query: 368  APNGWQTVFPLSIRTRASFSSSQAPTSSEPHGGSWMRCCTP 490
                  T  P S  T    +S+  PT++ P   +    C P
Sbjct: 991  T-----TTTPRSTTT----TSTSRPTTTTPRSTTKTSTCAP 1022

 Score = 32.3 bits (72), Expect = 5.7
 Identities = 38/152 (25%), Positives = 55/152 (36%), Gaps = 2/152 (1%)
 Frame = +2

Query: 41  SSPCTRSLQMCAPW--TSSPRTRPCQLCTPPTTPRCFWIALLSTRKR*RIV*TTFWITTT 214
           +SPCT+      P   T   +T PC      TTPR                 TT   T+ 
Sbjct: 191 TSPCTQETTTPTPTCSTQGTQTTPCTCAQTTTTPRS----------------TTTTSTSR 234

Query: 215 PATAVS*PCFTSQTSRSGMDGSKTGATPS*TSRSGILERASTQ*PSWCSRAAPNGWQTVF 394
           P T       T+ TSR       T  TP  T+ +    R +T  P   +  +     T  
Sbjct: 235 PTTTTPRSTTTTTTSR------PTTTTPRSTTTT-TTRRPTTTTPRCTTTTSTCAPTTTT 287

Query: 395 PLSIRTRASFSSSQAPTSSEPHGGSWMRCCTP 490
           P S  T    +++  PT++ P   +    C+P
Sbjct: 288 PRSTTT----TTTSRPTTTTPRCTTTTSTCSP 315

 Score = 32.0 bits (71), Expect = 7.4
 Identities = 42/165 (25%), Positives = 62/165 (37%), Gaps = 3/165 (1%)
 Frame = +2

Query: 53   TRSLQMCAPWTSSPRTRPCQLCTPP--TTPRCFWIALLSTRKR*RIV*TTFWITTTPATA 226
            T     CAP T++PR+      + P  TTPR       +T    R   TT   TTTP+T 
Sbjct: 934  TTKTSTCAPTTTTPRSTTTTSTSRPTTTTPRS-----TTTTTTSRPTTTTPRSTTTPST- 987

Query: 227  VS*PCFTSQTSRSGMDGSK-TGATPS*TSRSGILERASTQ*PSWCSRAAPNGWQTVFPLS 403
             S P  T+  S +    S+ T  TP  T+++      +T   S  +        T    +
Sbjct: 988  -SRPTTTTPRSTTTTSTSRPTTTTPRSTTKTSTCAPTTTTPRSTTTTTTSRPTTTTPRST 1046

Query: 404  IRTRASFSSSQAPTSSEPHGGSWMRCCTPQCDSCQAGEHPAAGVP 538
              T  S  ++  P S+     S     TP+  +      P    P
Sbjct: 1047 TTTTTSRPTTTTPRSTTTPCTSRPTTTTPRSTTTTTTSRPTTTTP 1091

>gb|AAK31375.1|AC084329_1 ppg3 [Leishmania major]
          Length = 1325

 Score = 38.1 bits (87), Expect = 0.10
 Identities = 42/179 (23%), Positives = 68/179 (37%)
 Frame = +2

Query: 2    APACCSWAAASNCSSPCTRSLQMCAPWTSSPRTRPCQLCTPPTTPRCFWIALLSTRKR*R 181
            AP+  S +A S+ SS    +    AP +SS          P ++      A  S+     
Sbjct: 760  APSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSS----- 814

Query: 182  IV*TTFWITTTPATAVS*PCFTSQTSRSGMDGSKTGATPS*TSRSGILERASTQ*PSWCS 361
                       P+++ S P  +S ++ S    + + ++ S  S S     AS+      S
Sbjct: 815  ----------APSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSS 864

Query: 362  RAAPNGWQTVFPLSIRTRASFSSSQAPTSSEPHGGSWMRCCTPQCDSCQAGEHPAAGVP 538
             +AP+   +  P S  +  S SSS AP+SS     S      P   S  A    ++  P
Sbjct: 865  SSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAP 923

 Score = 34.3 bits (77), Expect = 1.5
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
 Frame = +2

Query: 206  TTTPATAVS*PCFTSQTSRSGMDGSKTGATPS*TSRSGILERASTQ*-PSWCSRAAPNGW 382
            ++ P+++ S P  +S ++ S    + + ++ S  S S     AS+   PS  S +AP+  
Sbjct: 721  SSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSAS 780

Query: 383  QTVFPLSIRTRASFSSSQAPTSSEPHGGSWMRCCTPQCDS 502
             +  P S  +  S SSS AP+SS     S      P   S
Sbjct: 781  SSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSS 820

 Score = 33.9 bits (76), Expect = 2.0
 Identities = 26/99 (26%), Positives = 44/99 (44%)
 Frame = +2

Query: 206 TTTPATAVS*PCFTSQTSRSGMDGSKTGATPS*TSRSGILERASTQ*PSWCSRAAPNGWQ 385
           ++ P+++ S P  +S ++ S    + + ++ S  S S     AS+      S +AP+   
Sbjct: 691 SSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASS 750

Query: 386 TVFPLSIRTRASFSSSQAPTSSEPHGGSWMRCCTPQCDS 502
           +  P S  +  S SSS AP+SS     S      P   S
Sbjct: 751 SSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSS 789

 Score = 33.5 bits (75), Expect = 2.6
 Identities = 40/168 (23%), Positives = 68/168 (39%), Gaps = 1/168 (0%)
 Frame = +2

Query: 2    APACCSWAAASNCSSPCTRSLQMCAPWTSSPRTRPCQLCTPPTTPRCFWIALLSTRKR*R 181
            AP+  S +A S+ SS    +    AP +SS         + P++      A  S+     
Sbjct: 914  APSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSS 973

Query: 182  IV*TTFWITTTPATAVS*-PCFTSQTSRSGMDGSKTGATPS*TSRSGILERASTQ*PSWC 358
                +   ++ P+++ S  P  +S ++ S    + + ++ S  S S     AS+      
Sbjct: 974  SSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSS 1033

Query: 359  SRAAPNGWQTVFPLSIRTRASFSSSQAPTSSEPHGGSWMRCCTPQCDS 502
            S +AP+   +  P S  +  S SSS AP+SS     S      P   S
Sbjct: 1034 SSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSS 1081

 Score = 33.5 bits (75), Expect = 2.6
 Identities = 40/151 (26%), Positives = 67/151 (43%), Gaps = 1/151 (0%)
 Frame = +2

Query: 2    APACCSWAAASNCSSPCTRSLQMCAPWTSSPRTRPCQLCTPPTTPRCFWIALLSTRKR*R 181
            AP+  S +A S+ SS  + S    AP +SS          P ++      A  S+     
Sbjct: 946  APSASSSSAPSSSSSAPSAS-SSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSS 1004

Query: 182  IV*TTFWITTTPATAVS*PCFTSQTSRSGMDGSKTGATPS*TSRSGILERASTQ*-PSWC 358
                +   ++ P+++ S P  +S ++ S    + + ++ S  S S     AS+   PS  
Sbjct: 1005 SSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSS 1064

Query: 359  SRAAPNGWQTVFPLSIRTRASFSSSQAPTSS 451
            S +AP+   +  P S  +  S SSS AP+SS
Sbjct: 1065 SSSAPSASSSSAPSSSSSAPSASSSSAPSSS 1095

 Score = 32.3 bits (72), Expect = 5.7
 Identities = 44/171 (25%), Positives = 72/171 (41%), Gaps = 4/171 (2%)
 Frame = +2

Query: 2    APACCSWAAASNCSSPCTRSLQMCAPWTSSPRTRPCQLCTPPTTPRCFWIALLSTRKR*R 181
            AP+  S +A S+ SS    +    AP +SS         + P++      A  S+     
Sbjct: 791  APSASSSSAPSSSSSSAPSASSSSAP-SSSSSAPSASSSSAPSSSSSAPSASSSSAPSSS 849

Query: 182  IV*TTFWITTTPATAVS*PCFTSQT---SRSGMDGSKTGATPS*TSRSGILERASTQ*PS 352
                +   ++ P+++ S P  +S +   S S    + + + PS +S S     +S+  PS
Sbjct: 850  SSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPS-SSSSSAPSASSSSAPS 908

Query: 353  WCSRAAPNGWQTVFPLSIRTRA-SFSSSQAPTSSEPHGGSWMRCCTPQCDS 502
              S +AP+   +  P S  + A S SSS AP+SS     S      P   S
Sbjct: 909  SSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSS 959

>ref|XP_326844.1| hypothetical protein [Neurospora crassa]
           gi|12718419|emb|CAC28797.1| hypothetical protein
           [Neurospora crassa] gi|28922982|gb|EAA32201.1|
           hypothetical protein [Neurospora crassa]
          Length = 369

 Score = 37.7 bits (86), Expect = 0.14
 Identities = 42/160 (26%), Positives = 57/160 (35%), Gaps = 8/160 (5%)
 Frame = +2

Query: 23  AAASNCS-----SPCTRSLQMCAPWTSSPRTRPCQLCTPPTTPRCFWIALLSTRKR*RIV 187
           A   NC      +P   +   C P+   PRT       PPTT        +ST       
Sbjct: 88  ACQKNCRVYAVPAPFNLAPDECTPYF--PRTTTLAPTIPPTTASTTATGAVSTTGTTTAT 145

Query: 188 *TTFWITTTPATAVS*PCFTSQTSRSGMDGSKTGATPS*TSRSGILERASTQ*P--SWCS 361
            T     TT AT       ++  + +  + + T   P+ TS+      AS       W  
Sbjct: 146 TTATTTATTTATTTGTTTASNTNTDTNTNSAPTLPPPTTTSQPSTTASASKTWDHYHWTK 205

Query: 362 RAAP-NGWQTVFPLSIRTRASFSSSQAPTSSEPHGGSWMR 478
              P   W T    S    AS S+S APT + PH G W +
Sbjct: 206 SHGPWPEWTTTASASASASASASASAAPTRA-PHPGPWTK 244

>sp|Q62635|MUC2_RAT Mucin 2 precursor (Intestinal mucin 2) gi|1083720|pir||A54895 mucin
            2, intestinal/tracheal - rat (fragment)
            gi|12831482|gb|AAA21655.2| mucin [Rattus norvegicus]
          Length = 1513

 Score = 37.4 bits (85), Expect = 0.18
 Identities = 28/101 (27%), Positives = 43/101 (41%), Gaps = 1/101 (0%)
 Frame = +2

Query: 11   CCSWAAASNCSSPCTRSLQMCAPWTSSP-RTRPCQLCTPPTTPRCFWIALLSTRKR*RIV 187
            C  +    NC  P    L   +P TS+P  + P    +P T P    +   +T      +
Sbjct: 1371 CYDYEIRVNCCFPMEYCLSTVSPTTSTPISSTPQPTSSPTTLPTTSPLTSSATSPTTSHI 1430

Query: 188  *TTFWITTTPATAVS*PCFTSQTSRSGMDGSKTGATPS*TS 310
             +T   TT+P T+ + P  +  TS +    S T  TPS T+
Sbjct: 1431 TSTVSPTTSPTTSTTSPTTSPTTSTTSPTTSTTSPTPSPTT 1471



EST assemble image


clone accession position
1 LCL078c08_r AV630399 1 489
2 MXL093a01_r BP098413 251 621
3 MXL064a02_r BP096736 399 532




Chlamydomonas reinhardtii
Kazusa DNA Research Institute