Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003287A_C01 KCC003287A_c01
(805 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_194789.1| signal recognition particle receptor-related pr... 147 3e-34
gb|AAP80813.1| signal recognition particle receptor-like protein... 95 1e-18
gb|AAH21839.1| Signal recognition particle receptor ('docking pr... 84 3e-15
ref|NP_080406.1| signal recognition particle receptor ('docking ... 84 3e-15
ref|XP_235989.2| similar to RIKEN cDNA 1300011P19 [Rattus norveg... 82 1e-14
>ref|NP_194789.1| signal recognition particle receptor-related protein [Arabidopsis
thaliana] gi|25407666|pir||A85358 hypothetical protein
AT4g30600 [imported] - Arabidopsis thaliana
gi|7269961|emb|CAB79778.1| signal recognition particle
receptor-like protein [Arabidopsis thaliana]
gi|18086492|gb|AAL57699.1| AT4g30600/F17I23_60
[Arabidopsis thaliana] gi|22137194|gb|AAM91442.1|
AT4g30600/F17I23_60 [Arabidopsis thaliana]
Length = 634
Score = 147 bits (370), Expect = 3e-34
Identities = 106/255 (41%), Positives = 139/255 (53%), Gaps = 18/255 (7%)
Frame = +2
Query: 92 MLDYVLAFERGGAILWALQF--TSLRHNPLEAINALIRGCLLEERLGDNTFTFNPKSGAP 265
ML+ +L F RGG ILW + +L+ +P I+ LIR CLLEER G +F ++ GA
Sbjct: 1 MLEQLLIFTRGGLILWTCKEIGNALKGSP---IDTLIRSCLLEERSGAVSFNYDAP-GAA 56
Query: 266 QTLKWTFHNGLGLVFVAVYQKTLSLLYVDELLSNVKEEFVNVYKPGQRGYRQFDETFNRL 445
TLKWTFHN LGLVFVAVYQ+ L LLYVD+LLS VK+ F VY P + Y FDETF +L
Sbjct: 57 YTLKWTFHNDLGLVFVAVYQRILHLLYVDDLLSMVKQSFSEVYDPKRMAYDDFDETFRQL 116
Query: 446 LRDAESRADAAKKQPVMRSGPPANAKQGTGSQ-AVGAQAKKGTQAGKDASGDDDAGAARK 622
+AE+RA+ +K + + KQG S+ + K+ + G D D G K
Sbjct: 117 RIEAEARAEELRKTKQVGKPVTSVKKQGQVSKPGLEGGNKRVSSEGGSKKDDGDGGNKAK 176
Query: 623 ------GAANGTVGNTSDGS-----AGGEDGDEDNVRAFDVSKL----PKGMAGRGTRGV 757
G +NG D A G++ NV A D+SKL KG+ GRG GV
Sbjct: 177 VSTLTNGHSNGNHQMEDDSQETNDLANGKENTSSNV-AVDLSKLQKLRSKGVRGRG--GV 233
Query: 758 RGRPVPGAGSAKVSD 802
R G S+KV++
Sbjct: 234 RKTDSIGNKSSKVAE 248
>gb|AAP80813.1| signal recognition particle receptor-like protein L36 [Griffithsia
japonica]
Length = 186
Score = 95.1 bits (235), Expect = 1e-18
Identities = 68/192 (35%), Positives = 93/192 (48%), Gaps = 12/192 (6%)
Frame = +2
Query: 92 MLDYVLAFERGGAILWALQFTSLRHNPLEAINALIRGCLLEERLGDNTFTFNPKSGAPQT 271
M+D FE GG +LW F + +P ++AL+R LLE+RL FT+ +
Sbjct: 1 MIDQFCIFELGGTVLWTRTFLPPKGDP---VSALVRTVLLEDRLALTEFTYRTHA----- 52
Query: 272 LKWTFHNGLGLVFVAVYQKTLSLLYVDELLSNVKEEFV------NVYKPGQRGYRQFDET 433
L+W NG GLVFV VYQK+L Y D LL+ V++ FV + + FD
Sbjct: 53 LRWALDNGRGLVFVVVYQKSLPPPYADRLLALVRDHFVRHEAADGAAALTRSDFAAFDPA 112
Query: 434 FNRLLRDAESRADAAKKQPVM--RSGPPANAKQGTGSQAVGAQAKKGTQAGKDASGDD-- 601
F+RLL AE +A+AA + + RS PP K+ A + G G D D
Sbjct: 113 FDRLLDAAERKAEAAARAARLAPRSRPPDKKKKADAEPAPPPSGRAGPDGGDDRPLPDRP 172
Query: 602 --DAGAARKGAA 631
A A R+GAA
Sbjct: 173 PRGALARRRGAA 184
>gb|AAH21839.1| Signal recognition particle receptor ('docking protein') [Mus
musculus]
Length = 636
Score = 84.0 bits (206), Expect = 3e-15
Identities = 71/218 (32%), Positives = 97/218 (43%), Gaps = 15/218 (6%)
Frame = +2
Query: 92 MLDYVLAFERGGAILWALQFTSLRHNPLEAINALIRGCLLEERLGDNTFTFNPKSGAPQT 271
MLD+ F +GG +LW Q S + +NALIR LL+ER G+N+FT T
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVS--DSCTGPVNALIRSVLLQERGGNNSFTHEAL-----T 53
Query: 272 LKWTFHNGLGLVFVAVYQKTLSLLYVDELLSNVKEEFVNVYKPG---------QRGYRQF 424
LK+ N LVFV +QK L+L YVD+L+ +V F + Y+ G F
Sbjct: 54 LKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSASSLLNGTFDF 113
Query: 425 DETFNRLLRDAES----RADAAKK--QPVMRSGPPANAKQGTGSQAVGAQAKKGTQAGKD 586
F RLLR+AE RA K + ++ P + T + +AK + G
Sbjct: 114 QNDFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKTKEKAKNNKKRGAK 173
Query: 587 ASGDDDAGAARKGAANGTVGNTSDGSAGGEDGDEDNVR 700
G D A K A G S G GE E+ +R
Sbjct: 174 KEGSDGTLATSKTAPAEKSG-LSAGPENGELSKEELIR 210
>ref|NP_080406.1| signal recognition particle receptor ('docking protein') [Mus
musculus] gi|12836553|dbj|BAB23706.1| unnamed protein
product [Mus musculus] gi|26332409|dbj|BAC29922.1|
unnamed protein product [Mus musculus]
Length = 636
Score = 84.0 bits (206), Expect = 3e-15
Identities = 71/218 (32%), Positives = 97/218 (43%), Gaps = 15/218 (6%)
Frame = +2
Query: 92 MLDYVLAFERGGAILWALQFTSLRHNPLEAINALIRGCLLEERLGDNTFTFNPKSGAPQT 271
MLD+ F +GG +LW Q S + +NALIR LL+ER G+N+FT T
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVS--DSCTGPVNALIRSVLLQERGGNNSFTHEAL-----T 53
Query: 272 LKWTFHNGLGLVFVAVYQKTLSLLYVDELLSNVKEEFVNVYKPG---------QRGYRQF 424
LK+ N LVFV +QK L+L YVD+L+ +V F + Y+ G F
Sbjct: 54 LKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDF 113
Query: 425 DETFNRLLRDAES----RADAAKK--QPVMRSGPPANAKQGTGSQAVGAQAKKGTQAGKD 586
F RLLR+AE RA K + ++ P + T + +AK + G
Sbjct: 114 QNDFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKTKEKAKNNKKRGAK 173
Query: 587 ASGDDDAGAARKGAANGTVGNTSDGSAGGEDGDEDNVR 700
G D A K A G S G GE E+ +R
Sbjct: 174 KEGSDGTLATSKTAPAEKSG-LSAGPENGELSKEELIR 210
>ref|XP_235989.2| similar to RIKEN cDNA 1300011P19 [Rattus norvegicus]
Length = 637
Score = 81.6 bits (200), Expect = 1e-14
Identities = 70/218 (32%), Positives = 96/218 (43%), Gaps = 15/218 (6%)
Frame = +2
Query: 92 MLDYVLAFERGGAILWALQFTSLRHNPLEAINALIRGCLLEERLGDNTFTFNPKSGAPQT 271
MLD+ F +GG +LW Q S + +NALIR LL+ER G+N+FT T
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVS--DSCTGPVNALIRSVLLQERGGNNSFTHEAL-----T 53
Query: 272 LKWTFHNGLGLVFVAVYQKTLSLLYVDELLSNVKEEFVNVYKPG---------QRGYRQF 424
LK+ N LVFV +QK L+L YVD+L+ +V F + Y+ G F
Sbjct: 54 LKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDF 113
Query: 425 DETFNRLLRDAES----RADAAKK--QPVMRSGPPANAKQGTGSQAVGAQAKKGTQAGKD 586
F RLLR+AE RA K + ++ P + T + +AK + G
Sbjct: 114 QNDFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKTKEKAKNNKKKGSK 173
Query: 587 ASGDDDAGAARKGAANGTVGNTSDGSAGGEDGDEDNVR 700
G D A K A G G GE E+ +R
Sbjct: 174 KEGSDGPLATSKTAPAEKSG-LPVGPENGELSKEELIR 210
