KCC003286A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003286A_C01 KCC003286A_c01
agatcatggacgtcaagaagCAGGGCGCCCACGCCTACGTGGGTGCGTTCCTCAAGCGGC
CGGAGCCGCCGCTGGGCATGACGGCCGCCGCCGCCGTGGCCGCCGCGGGGGAGACGGAGG
TGCGGGACGCCGCCTCCCACCTGTACGACATCGGCACGTTTGCGCAGGTGCACACAGTGC
TGGCGGGCGACAGCGCCGACTCGGCGCAGCTGCTGCTGCTGGGGCACCGCCGCATCCGCA
AGACCGGAGTGATCTCTGCGGACCCCCTGCGTGTGCATGTGGACCACCTGCGTGATGAGT
CCTACACCAGCGATGACATCCTCAAGGCCACCAGCATGGAGATCGTGAACACCATGCGCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003286A_C01 KCC003286A_c01
         (360 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P93648|LON2_MAIZE Lon protease homolog 2, mitochondrial precu...    78  3e-14
gb|AAB48000.1| LON protease homolog [Arabidopsis thaliana]             75  3e-13
ref|NP_568490.1| Lon protease homolog 2 precursor [Arabidopsis t...    75  3e-13
pir||T01765 endopeptidase La-like proteinase (EC 3.4.21.-) precu...    75  3e-13
dbj|BAC21361.1| putative ATP-dependent proteinase LON2 [Oryza sa...    74  4e-13

>sp|P93648|LON2_MAIZE Lon protease homolog 2, mitochondrial precursor
           gi|7428222|pir||T04325 probable ATP-dependent proteinase
           LON2 (EC 3.4.21.-), mitochondrial - maize
           gi|1816588|gb|AAC50021.1| LON2 [Zea mays]
          Length = 964

 Score = 78.2 bits (191), Expect = 3e-14
 Identities = 45/123 (36%), Positives = 77/123 (62%), Gaps = 4/123 (3%)
 Frame = +3

Query: 3   IMDVKKQGAHAYVGAFLKRPEP---PLGMTAAAAVAAAGETEVRDAASHLYDIGTFAQVH 173
           +++ +K+ A  Y GAFL + E    P  +T + +  +  + + +D    L+++GT AQ+ 
Sbjct: 118 LIENRKRSA-PYAGAFLVKDEEGTDPNIVTGSDSAKSIDDLKGKDLLKRLHEVGTLAQI- 175

Query: 174 TVLAGDSADSAQLLLLGHRRIRKTGVISADPLRVHVDHLRDESYT-SDDILKATSMEIVN 350
           T + GD      ++LLGHRR+R T ++  DPL V VDHL+++ Y   DD++KATS E+++
Sbjct: 176 TSIQGD-----HVVLLGHRRLRITEMVEEDPLTVKVDHLKEKPYNKDDDVMKATSFEVIS 230

Query: 351 TMR 359
           T+R
Sbjct: 231 TLR 233

>gb|AAB48000.1| LON protease homolog [Arabidopsis thaliana]
          Length = 941

 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 40/110 (36%), Positives = 70/110 (63%), Gaps = 2/110 (1%)
 Frame = +3

Query: 36  YVGAFLKRPEPPLGMTAAA-AVAAAGETEVRDAASHLYDIGTFAQVHTVLAGDSADSAQL 212
           Y GAFL + +P    +++  A     E + ++  + L+++GT AQ+ ++  GD     Q+
Sbjct: 139 YAGAFLLKDDPSADSSSSTDAEKNINELKGKELLNRLHEVGTLAQISSI-QGD-----QV 192

Query: 213 LLLGHRRIRKTGVISADPLRVHVDHLRDESY-TSDDILKATSMEIVNTMR 359
           +L+GHRR+R   ++S +PL V VDHL+D  +   DD++KATS E+++T+R
Sbjct: 193 ILVGHRRLRIKEMVSEEPLTVKVDHLKDNPFDMDDDVVKATSFEVISTLR 242

>ref|NP_568490.1| Lon protease homolog 2 precursor [Arabidopsis thaliana]
           gi|27735209|sp|P93655|LON2_ARATH Lon protease homolog 2,
           mitochondrial precursor gi|20259500|gb|AAM13870.1|
           putative Lon protease homolog 2 precursor [Arabidopsis
           thaliana] gi|21436459|gb|AAM51430.1| putative Lon
           protease homolog 2 precursor [Arabidopsis thaliana]
          Length = 940

 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 40/110 (36%), Positives = 70/110 (63%), Gaps = 2/110 (1%)
 Frame = +3

Query: 36  YVGAFLKRPEPPLGMTAAA-AVAAAGETEVRDAASHLYDIGTFAQVHTVLAGDSADSAQL 212
           Y GAFL + +P    +++  A     E + ++  + L+++GT AQ+ ++  GD     Q+
Sbjct: 139 YAGAFLLKDDPSADSSSSTDAEKNINELKGKELLNRLHEVGTLAQISSI-QGD-----QV 192

Query: 213 LLLGHRRIRKTGVISADPLRVHVDHLRDESY-TSDDILKATSMEIVNTMR 359
           +L+GHRR+R   ++S +PL V VDHL+D  +   DD++KATS E+++T+R
Sbjct: 193 ILVGHRRLRIKEMVSEEPLTVKVDHLKDNPFDMDDDVVKATSFEVISTLR 242

>pir||T01765 endopeptidase La-like proteinase (EC 3.4.21.-) precursor,
           mitochondrial - Arabidopsis thaliana
           gi|2191174|gb|AAB61060.1| similar to the peptidase
           family S16 [Arabidopsis thaliana]
          Length = 1096

 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 40/110 (36%), Positives = 70/110 (63%), Gaps = 2/110 (1%)
 Frame = +3

Query: 36  YVGAFLKRPEPPLGMTAAA-AVAAAGETEVRDAASHLYDIGTFAQVHTVLAGDSADSAQL 212
           Y GAFL + +P    +++  A     E + ++  + L+++GT AQ+ ++  GD     Q+
Sbjct: 173 YAGAFLLKDDPSADSSSSTDAEKNINELKGKELLNRLHEVGTLAQISSI-QGD-----QV 226

Query: 213 LLLGHRRIRKTGVISADPLRVHVDHLRDESY-TSDDILKATSMEIVNTMR 359
           +L+GHRR+R   ++S +PL V VDHL+D  +   DD++KATS E+++T+R
Sbjct: 227 ILVGHRRLRIKEMVSEEPLTVKVDHLKDNPFDMDDDVVKATSFEVISTLR 276

>dbj|BAC21361.1| putative ATP-dependent proteinase LON2 [Oryza sativa (japonica
           cultivar-group)]
          Length = 976

 Score = 74.3 bits (181), Expect = 4e-13
 Identities = 42/112 (37%), Positives = 71/112 (62%), Gaps = 4/112 (3%)
 Frame = +3

Query: 36  YVGAFLKRPEP---PLGMTAAAAVAAAGETEVRDAASHLYDIGTFAQVHTVLAGDSADSA 206
           Y GAFL + E    P  +T++ +  +  + + ++    L ++GT AQ+ T + GD     
Sbjct: 141 YAGAFLVKDEEGTDPNIVTSSDSDKSIDDLKGKELLQRLNEVGTLAQI-TSIQGD----- 194

Query: 207 QLLLLGHRRIRKTGVISADPLRVHVDHLRDESY-TSDDILKATSMEIVNTMR 359
           Q++LLGHRR++ T ++  DPL V VDHL+++ Y   DD++KATS E+++T+R
Sbjct: 195 QVVLLGHRRLKITEMVQEDPLTVKVDHLKEKPYDKDDDVIKATSFEVISTLR 246



EST assemble image


clone accession position
1 LCL074g03_r AV630171 1 360
2 LCL095d12_r AV631518 21 356




Chlamydomonas reinhardtii
Kazusa DNA Research Institute