Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003282A_C01 KCC003282A_c01
(505 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_324404.1| predicted protein [Neurospora crassa] gi|289174... 41 0.007
dbj|BAC38149.1| unnamed protein product [Mus musculus] 41 0.010
dbj|BAC25636.1| unnamed protein product [Mus musculus] 41 0.010
ref|NP_504738.1| COLlagen structural gene (col-143) [Caenorhabdi... 40 0.013
emb|CAA76851.1| winged-helix transcription factor [Gallus gallus] 40 0.013
>ref|XP_324404.1| predicted protein [Neurospora crassa] gi|28917485|gb|EAA27185.1|
predicted protein [Neurospora crassa]
Length = 2992
Score = 41.2 bits (95), Expect = 0.007
Identities = 23/49 (46%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -2
Query: 486 PPGTVPGLTRPSAPADSGGHTR-CGAFPRAPKSGPGAPDAPPGPCPRYR 343
P T P T PS P SGG R G+ PR S P P PP P PR R
Sbjct: 2671 PASTRPAGTVPSQPRSSGGQPRPSGSQPRPSGSQPRPPPPPPAPLPRQR 2719
>dbj|BAC38149.1| unnamed protein product [Mus musculus]
Length = 136
Score = 40.8 bits (94), Expect = 0.010
Identities = 31/84 (36%), Positives = 37/84 (43%), Gaps = 2/84 (2%)
Frame = -2
Query: 501 PGPSSPPGTVPGLTRPSAPADSGGHTRCGAFPRAPKSGPGAPD--APPGPCPRYRCQRAG 328
PG SSP G VP L R SA H + P P+ PG+P +P G R G
Sbjct: 53 PGASSPSGPVPSLNRRSA------HGKGRRKPDHPERLPGSPGHRSPQGAADASR--TGG 104
Query: 327 RDRRRSRHREHAGSATVPATAAVR 256
R R R H A +A+ P VR
Sbjct: 105 RGRERPAHGAQASTASPPQPLRVR 128
>dbj|BAC25636.1| unnamed protein product [Mus musculus]
Length = 136
Score = 40.8 bits (94), Expect = 0.010
Identities = 31/84 (36%), Positives = 37/84 (43%), Gaps = 2/84 (2%)
Frame = -2
Query: 501 PGPSSPPGTVPGLTRPSAPADSGGHTRCGAFPRAPKSGPGAPD--APPGPCPRYRCQRAG 328
PG SSP G VP L R SA H + P P+ PG+P +P G R G
Sbjct: 53 PGASSPSGPVPSLNRRSA------HGKGRRKPDHPERLPGSPGHRSPQGAADASR--TGG 104
Query: 327 RDRRRSRHREHAGSATVPATAAVR 256
R R R H A +A+ P VR
Sbjct: 105 RGRERPAHGAQASTASPPQPLRVR 128
>ref|NP_504738.1| COLlagen structural gene (col-143) [Caenorhabditis elegans]
gi|7507860|pir||T32250 hypothetical protein T15B7.3 -
Caenorhabditis elegans gi|2384940|gb|AAB69959.1|
Collagen protein 143 [Caenorhabditis elegans]
Length = 319
Score = 40.4 bits (93), Expect = 0.013
Identities = 41/130 (31%), Positives = 49/130 (37%), Gaps = 8/130 (6%)
Frame = +2
Query: 137 CSQTAAGPKNAAPHTSPRDRGHSVWQGHPAPSSCYCTMCQR-TAAVAGTVAEPAC----- 298
C A GP A P +P +G++ G PA S R A AG+ +P
Sbjct: 134 CPAGAPGP--AGPPGAPGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPG 191
Query: 299 --SRCRERRLSRPAR*QRYRGHGPGGASGAPGPDFGARGKAPQRV*PPESAGADGRVRPG 472
R +R P R GP GA G PG GA PQ PP +G G
Sbjct: 192 NPGRGGQRSRGTPGASGRPGPQGPAGAPGQPGRSGGAGTPGPQG--PPGPSGQPGHSGND 249
Query: 473 TVPGGDEGPG 502
VPG PG
Sbjct: 250 GVPGTPGNPG 259
Score = 37.7 bits (86), Expect = 0.081
Identities = 23/52 (44%), Positives = 26/52 (49%), Gaps = 4/52 (7%)
Frame = -2
Query: 501 PGPSSPPGTVPGLT----RPSAPADSGGHTRCGAFPRAPKSGPGAPDAPPGP 358
PGP+ PPG PG +P APA SGG G PR P G+P P P
Sbjct: 139 PGPAGPPGA-PGPKGNNGQPGAPAQSGGRGPPG--PRGPAGDAGSPGQPGHP 187
>emb|CAA76851.1| winged-helix transcription factor [Gallus gallus]
Length = 528
Score = 40.4 bits (93), Expect = 0.013
Identities = 22/52 (42%), Positives = 26/52 (49%), Gaps = 2/52 (3%)
Frame = -2
Query: 501 PGPSSPPGTVPGLTRP--SAPADSGGHTRCGAFPRAPKSGPGAPDAPPGPCP 352
PG + P G VP + P S+ SGG R GA P A G P+ PP P P
Sbjct: 208 PGAAPPLGAVPKIESPDSSSSLSSGGSPRGGALPAARSLGMEGPEPPPPPPP 259
