KCC003278A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC003278A_C01 KCC003278A_c01
gTGAGGTATTCATACCTTCAATTGCATAACCTTGGCGCCTTGGCGGGGCGCTGGAACCCG
AAAGTCGCCCTCGCGCCCTCGGCACTTTAAATATCGACCGCTATAATTCAACCATCTAAT
CAACTAGTTTGTTTGATTCATAGCAAAGATGGAGGCCCCAAAGGCGCCTGCGGAGCCATC
CTGGCCCGGCGTGCTGCGAACCAAGGAGTTCAAGGAGAAGATCAAGTCAGCAAAGGTGCT
GTGCGTGGGCGCTGGCGGCATTGGCTGTGAGCTGCTAAAGACGCTGGTGTGCACGGGTTT
CCGGAACATCGAGGTGATTGACCTTGACACCATTGAGACCTCCAACCTGAACCGCCAGTT
CCTGTTCCGCAAGCACCACGTGGGACAGAGCAAGGCCAACACCGCGGCGGCCGTGGTGCA
AGGCTTCTGCCCCGGCGCCTCCATCACGCCGTACCACGCCAACGTCA
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003278A_C01 KCC003278A_c01
(467 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAH55614.1| Unknown (protein for MGC:66354) [Danio rerio] 119 2e-26
gb|AAH43962.1| Similar to SUMO-1 activating enzyme subunit 2 [Xe... 116 1e-25
ref|NP_179742.2| SUMO activating enzyme 2 (SAE2) [Arabidopsis th... 114 6e-25
pir||F84601 probable ubiquitin activating enzyme [imported] - Ar... 114 6e-25
emb|CAB54319.3| C. elegans UBA-2 protein (corresponding sequence... 112 3e-24
>gb|AAH55614.1| Unknown (protein for MGC:66354) [Danio rerio]
Length = 640
Score = 119 bits (298), Expect = 2e-26
Identities = 60/93 (64%), Positives = 71/93 (75%)
Frame = +2
Query: 188 GVLRTKEFKEKIKSAKVLCVGAGGIGCELLKTLVCTGFRNIEVIDLDTIETSNLNRQFLF 367
G LR K+ + + S +VL VGAGGIGCELLK LV TGF+NIEVIDLDTI+ SNLNRQFLF
Sbjct: 6 GPLR-KQLADSLSSCRVLVVGAGGIGCELLKNLVLTGFKNIEVIDLDTIDVSNLNRQFLF 64
Query: 368 RKHHVGQSKANTAAAVVQGFCPGASITPYHANV 466
+K HVG+SKA A V FCP A+IT YH ++
Sbjct: 65 QKKHVGKSKAQVAKESVLRFCPSANITAYHDSI 97
>gb|AAH43962.1| Similar to SUMO-1 activating enzyme subunit 2 [Xenopus laevis]
Length = 656
Score = 116 bits (291), Expect = 1e-25
Identities = 56/88 (63%), Positives = 68/88 (76%)
Frame = +2
Query: 203 KEFKEKIKSAKVLCVGAGGIGCELLKTLVCTGFRNIEVIDLDTIETSNLNRQFLFRKHHV 382
KE E + ++++L VGAGGIGCELLK LV TGF N++VIDLDTI+ SNLNRQFLF+K HV
Sbjct: 24 KEVAEAVSASRLLVVGAGGIGCELLKNLVLTGFTNLDVIDLDTIDVSNLNRQFLFQKKHV 83
Query: 383 GQSKANTAAAVVQGFCPGASITPYHANV 466
G+SKA A V FCP ASIT YH ++
Sbjct: 84 GRSKAQVAKESVLQFCPDASITAYHDSI 111
>ref|NP_179742.2| SUMO activating enzyme 2 (SAE2) [Arabidopsis thaliana]
gi|26450535|dbj|BAC42380.1| putative ubiquitin
activating enzyme [Arabidopsis thaliana]
Length = 625
Score = 114 bits (285), Expect = 6e-25
Identities = 57/91 (62%), Positives = 67/91 (72%)
Frame = +2
Query: 194 LRTKEFKEKIKSAKVLCVGAGGIGCELLKTLVCTGFRNIEVIDLDTIETSNLNRQFLFRK 373
+ T++ + IK AKVL VGAGGIGCELLKTL +GF +I +ID+DTIE SNLNRQFLFR+
Sbjct: 1 MATQQQQSAIKGAKVLMVGAGGIGCELLKTLALSGFEDIHIIDMDTIEVSNLNRQFLFRR 60
Query: 374 HHVGQSKANTAAAVVQGFCPGASITPYHANV 466
HVGQSKA A V F P +I YHANV
Sbjct: 61 SHVGQSKAKVARDAVLRFRPNINIRSYHANV 91
>pir||F84601 probable ubiquitin activating enzyme [imported] - Arabidopsis
thaliana gi|4567278|gb|AAD23691.1| putative ubiquitin
activating enzyme [Arabidopsis thaliana]
Length = 700
Score = 114 bits (285), Expect = 6e-25
Identities = 57/91 (62%), Positives = 67/91 (72%)
Frame = +2
Query: 194 LRTKEFKEKIKSAKVLCVGAGGIGCELLKTLVCTGFRNIEVIDLDTIETSNLNRQFLFRK 373
+ T++ + IK AKVL VGAGGIGCELLKTL +GF +I +ID+DTIE SNLNRQFLFR+
Sbjct: 1 MATQQQQSAIKGAKVLMVGAGGIGCELLKTLALSGFEDIHIIDMDTIEVSNLNRQFLFRR 60
Query: 374 HHVGQSKANTAAAVVQGFCPGASITPYHANV 466
HVGQSKA A V F P +I YHANV
Sbjct: 61 SHVGQSKAKVARDAVLRFRPNINIRSYHANV 91
>emb|CAB54319.3| C. elegans UBA-2 protein (corresponding sequence W02A11.4)
[Caenorhabditis elegans]
Length = 425
Score = 112 bits (279), Expect = 3e-24
Identities = 57/97 (58%), Positives = 67/97 (68%)
Frame = +2
Query: 176 PSWPGVLRTKEFKEKIKSAKVLCVGAGGIGCELLKTLVCTGFRNIEVIDLDTIETSNLNR 355
PSW +E EKI +K+L +GAGGIGCELLK L TGFR + VIDLDTI+ SNLNR
Sbjct: 2 PSW------REKHEKIVQSKILVIGAGGIGCELLKNLAVTGFRKVHVIDLDTIDISNLNR 55
Query: 356 QFLFRKHHVGQSKANTAAAVVQGFCPGASITPYHANV 466
QFLFRK HV SKA TA VV+ FCP +T H ++
Sbjct: 56 QFLFRKEHVSSSKAATATQVVKQFCPQIELTFDHDSI 92
EST assemble image
|
|
|
|
clone |
accession |
position |
1 |
LCL071h12_r |
AV630046 |
1 |
337 |
2 |
LCL095d04_r |
AV631513 |
2 |
467 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute