Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003267A_C01 KCC003267A_c01
(362 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_827031.1| putative TetR-family transcriptional regulator ... 38 0.041
sp|P10156|H1_TETTH HISTONE H1 gi|84354|pir||A26490 histone H1, m... 34 0.59
gb|AAK67486.1| Cs2 protein [Schistosoma japonicum] 34 0.59
ref|NP_736451.1| putative peptidoglycan linked protein (LPXTG mo... 33 1.0
gb|AAF32367.1| proline-rich protein RiP-15 [Oryza sativa] 33 1.0
>ref|NP_827031.1| putative TetR-family transcriptional regulator [Streptomyces
avermitilis MA-4680] gi|29609516|dbj|BAC73566.1|
putative TetR-family transcriptional regulator
[Streptomyces avermitilis MA-4680]
Length = 218
Score = 37.7 bits (86), Expect = 0.041
Identities = 19/64 (29%), Positives = 38/64 (58%)
Frame = -3
Query: 330 SPASQASRPSLPPASLPPSSQRHQRKLRCFFASSFASRRPWSQAMQWRERSQDSELRRNS 151
S ++A+RP++ PAS P + ++ R+ R AS+ + R A+Q RE ++ S++ +
Sbjct: 10 STGARAARPAVQPASPPLTERQEARRRRILHASAQLASRGGFDAVQMREVAESSQVALGT 69
Query: 150 IFFY 139
++ Y
Sbjct: 70 LYRY 73
>sp|P10156|H1_TETTH HISTONE H1 gi|84354|pir||A26490 histone H1, macronuclear -
Tetrahymena thermophila gi|161794|gb|AAA30119.1| histone
H1
Length = 164
Score = 33.9 bits (76), Expect = 0.59
Identities = 21/65 (32%), Positives = 30/65 (45%)
Frame = +3
Query: 168 PSLATVRAIASLGSTGAARQKMKQKSIGAFFGGAGTKAGAKQEAVKDAKPAKPESKPKTK 347
P+ + + G AA+ K +K + AK+E KD KPAK E+K +TK
Sbjct: 95 PAKEAAKKAINPGKKAAAQPKSTKKEVKK------DNKTAKKETKKDHKPAKKEAKKETK 148
Query: 348 PEPAD 362
P D
Sbjct: 149 PAKKD 153
>gb|AAK67486.1| Cs2 protein [Schistosoma japonicum]
Length = 206
Score = 33.9 bits (76), Expect = 0.59
Identities = 17/46 (36%), Positives = 22/46 (46%)
Frame = +2
Query: 203 WLHGRREAKDEAKKHRSFLWWRWDEGGSEAGGSEGREACEAGEQAQ 340
WL G +K + W D GG+ AGGS G E E GE+ +
Sbjct: 141 WLGGALGGAQGSKWFFTVFLWDGDSGGATAGGSGGSEGGEEGERGE 186
>ref|NP_736451.1| putative peptidoglycan linked protein (LPXTG motif) [Streptococcus
agalactiae NEM316] gi|24413599|emb|CAD47677.1| gbs2018
[Streptococcus agalactiae NEM316]
Length = 643
Score = 33.1 bits (74), Expect = 1.0
Identities = 17/27 (62%), Positives = 20/27 (73%), Gaps = 1/27 (3%)
Frame = +3
Query: 276 KAGAKQEAVKDAKP-AKPESKPKTKPE 353
K AK EA +AKP AKPE+KP+ KPE
Sbjct: 509 KPEAKPEAKPEAKPEAKPEAKPEAKPE 535
Score = 33.1 bits (74), Expect = 1.0
Identities = 17/27 (62%), Positives = 20/27 (73%), Gaps = 1/27 (3%)
Frame = +3
Query: 276 KAGAKQEAVKDAKP-AKPESKPKTKPE 353
K AK EA +AKP AKPE+KP+ KPE
Sbjct: 513 KPEAKPEAKPEAKPEAKPEAKPEAKPE 539
Score = 32.3 bits (72), Expect = 1.7
Identities = 17/27 (62%), Positives = 19/27 (69%), Gaps = 1/27 (3%)
Frame = +3
Query: 276 KAGAKQEAVKDAKP-AKPESKPKTKPE 353
K AK EA +AKP AKPE+KP KPE
Sbjct: 521 KPEAKPEAKPEAKPEAKPEAKPDVKPE 547
Score = 30.0 bits (66), Expect = 8.5
Identities = 12/18 (66%), Positives = 15/18 (82%)
Frame = +3
Query: 300 VKDAKPAKPESKPKTKPE 353
+KD K AKPE+KP+ KPE
Sbjct: 502 LKDKKVAKPEAKPEAKPE 519
Score = 30.0 bits (66), Expect = 8.5
Identities = 16/31 (51%), Positives = 18/31 (57%), Gaps = 5/31 (16%)
Frame = +3
Query: 276 KAGAKQEAVKDAKP-----AKPESKPKTKPE 353
K AK EA D KP KPE+KP+ KPE
Sbjct: 533 KPEAKPEAKPDVKPEAKPDVKPEAKPEAKPE 563
>gb|AAF32367.1| proline-rich protein RiP-15 [Oryza sativa]
Length = 170
Score = 33.1 bits (74), Expect = 1.0
Identities = 19/52 (36%), Positives = 26/52 (49%)
Frame = +3
Query: 201 LGSTGAARQKMKQKSIGAFFGGAGTKAGAKQEAVKDAKPAKPESKPKTKPEP 356
LG+ AA + + + G G + +KQ V KP +PE KPK KP P
Sbjct: 4 LGALAAATAFIDEAAAAGRGLGHGGRFMSKQGRVTYEKPPEPEPKPKPKPHP 55
