KCC003265A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003265A_C01 KCC003265A_c01
aggacgcctacatcaacgacCTGTTCAAGTACTACCACGAGACGCGCGAGCCGCGGGTGC
TGACGCCGCGGGTGCCGGCCTGGAAGGGCAACGACGACGCCGAGGACGCGGCGGATGCGG
CCAACGAAGACGCCGGCACGGAGGAGGACGGCGGCGCGGCAGCCCCGCCGGCCAAGGAGA
TTCACCACGAGGACATCTGGAGCATCGGCGAGCGCGTGTGCGGCGAGGAGGCAGAGTGGA
TCAAAATGCAGGTGTGCGGGCTGCTGCGGCTGGACAGCGGCGGGCGCGGCGGCAGCCTGC
GCTTCCCGGGCATGCAGCCTGTCAGCCTCAGCCTGGAGCGCATGGCGGACCTGGCGGCGC
ACAGGTACCACGTGACCTGGAAGGCGGACGGCACGCGCTACATGATGCTGCTGCTGCCGC
AGGGCACCTACATCATGGATCGCTCCTTCAACGTGGTGCGCTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003265A_C01 KCC003265A_c01
         (463 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_187522.2| mRNA capping enzyme, RNA guanylyltransferase -r...   105  2e-22
gb|AAN17417.1| mRNA capping enzyme - like protein [Arabidopsis t...    99  2e-20
ref|NP_198173.1| mRNA capping enzyme - like [Arabidopsis thalian...    80  8e-15
gb|AAD56326.1|AC009326_13 putative mRNA capping enzyme, RNA guan...    78  4e-14
ref|NP_572952.1| CG1810-PA [Drosophila melanogaster] gi|7292972|...    60  9e-09

>ref|NP_187522.2| mRNA capping enzyme, RNA guanylyltransferase -related [Arabidopsis
           thaliana] gi|21928125|gb|AAM78090.1| AT3g09100/MZB10_13
           [Arabidopsis thaliana]
          Length = 471

 Score =  105 bits (263), Expect = 2e-22
 Identities = 63/159 (39%), Positives = 87/159 (54%), Gaps = 8/159 (5%)
 Frame = +3

Query: 9   YINDLFKYYHETREPRVLTPRVPAWKGNDDAEDAADAANEDAGTEEDGGAAAPPA---KE 179
           YI+ L+ +YHE +   V+ P  P WK + + +   +A  +D   ++DGG A P     +E
Sbjct: 247 YIDALYSFYHEIKPESVICPSTPEWKRSTELDLNGEALPDDE--DDDGGPAGPVQGFQEE 304

Query: 180 IHHEDIWSIGERVCGEEA-----EWIKMQVCGLLRLDSGGRGGSLRFPGMQPVSLSLERM 344
            H  D+    + V G+E      E  +     +L L+ GGRG S +FPG  PVSL+ E +
Sbjct: 305 SHQVDVKMSNDDVLGDEIPPDQEEGYRQFFYRMLSLNIGGRGCS-QFPGSHPVSLNRENL 363

Query: 345 ADLAAHRYHVTWKADGTRYMMLLLPQGTYIMDRSFNVVR 461
             L    Y+ TWKADGTRYMMLL   G YI+DRSF   R
Sbjct: 364 QLLRQRYYYATWKADGTRYMMLLTTDGCYIVDRSFRFRR 402

>gb|AAN17417.1| mRNA capping enzyme - like protein [Arabidopsis thaliana]
           gi|24899669|gb|AAN65049.1| mRNA capping enzyme - like
           protein [Arabidopsis thaliana]
          Length = 657

 Score = 99.0 bits (245), Expect = 2e-20
 Identities = 58/156 (37%), Positives = 84/156 (53%), Gaps = 5/156 (3%)
 Frame = +3

Query: 9   YINDLFKYYHETREPRVLTPRVPAWKGNDDAEDAADAANEDAGTEEDGGAAAPPAKEIHH 188
           YI+ L+ +YHE +   V  P  P WK + + +   +A  +D    +D  +   P +EI+ 
Sbjct: 235 YIDALYTFYHEIKPESVTCPPTPEWKRSAELDLNGEAVQDD----DDDDSPPDPVQEINQ 290

Query: 189 EDIWSIGERVCGEEA----EWIKMQVC-GLLRLDSGGRGGSLRFPGMQPVSLSLERMADL 353
           E++    +   G+E     E    Q C  +L ++ GGRG  ++FPG  PVSL  E +  L
Sbjct: 291 ENVKMSNDDTLGDEIPHYQEEAYRQFCYKMLMMNVGGRG-FMQFPGSHPVSLDRESLQLL 349

Query: 354 AAHRYHVTWKADGTRYMMLLLPQGTYIMDRSFNVVR 461
               Y+ TWKADGTRYMMLL   G Y++DRSF   R
Sbjct: 350 RQRYYYATWKADGTRYMMLLTIDGCYLIDRSFKFRR 385

>ref|NP_198173.1| mRNA capping enzyme - like [Arabidopsis thaliana]
           gi|5732432|gb|AAD49100.1|AF177535_4 contains similarity
           to Pfam family PF01331 - mRNA capping enzyme;
           score=24.3, E=1.3e-11, E=1 [Arabidopsis thaliana]
          Length = 625

 Score = 80.5 bits (197), Expect = 8e-15
 Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 4/155 (2%)
 Frame = +3

Query: 9   YINDLFKYYHETREPRVLTPRVPAWKGNDDA----EDAADAANEDAGTEEDGGAAAPPAK 176
           YI+ L+++YHE +   V+ P  P WK +++A    +D A +  E  G  ++         
Sbjct: 206 YIDALYRFYHEVKPGSVICPPTPEWKRSEEAKFDDDDNALSYREVQGNNQEENV------ 259

Query: 177 EIHHEDIWSIGERVCGEEAEWIKMQVCGLLRLDSGGRGGSLRFPGMQPVSLSLERMADLA 356
           ++ ++D+  +G+ +  ++    +  +  +L +       S++FPG  P+SL  E +  L 
Sbjct: 260 QLSNDDV--LGDEIPYDQEVSYQNSINHMLNI-------SMQFPGSHPLSLGREALQLLR 310

Query: 357 AHRYHVTWKADGTRYMMLLLPQGTYIMDRSFNVVR 461
              Y+ TWKADGTRYMMLL   G Y+++R +   R
Sbjct: 311 QRYYYATWKADGTRYMMLLTRDGCYLVNREYRFRR 345

>gb|AAD56326.1|AC009326_13 putative mRNA capping enzyme, RNA guanylyltransferase [Arabidopsis
           thaliana]
          Length = 653

 Score = 78.2 bits (191), Expect = 4e-14
 Identities = 52/159 (32%), Positives = 75/159 (46%), Gaps = 8/159 (5%)
 Frame = +3

Query: 9   YINDLFKYYHETREPRVLTPRVPAWKGNDDAEDAADAANEDAGTEEDGGAAAPPA---KE 179
           YI+ L+ +YHE +   V+ P  P WK + + +   +A  +D   ++DGG A P     +E
Sbjct: 247 YIDALYSFYHEIKPESVICPSTPEWKRSTELDLNGEALPDDE--DDDGGPAGPVQGFQEE 304

Query: 180 IHHEDIWSIGERVCGEEA-----EWIKMQVCGLLRLDSGGRGGSLRFPGMQPVSLSLERM 344
            H  D+    + V G+E      E  +     +L L+ G              +   E +
Sbjct: 305 SHQVDVKMSNDDVLGDEIPPDQEEGYRQFFYRMLSLNIGVG------------NFKSENL 352

Query: 345 ADLAAHRYHVTWKADGTRYMMLLLPQGTYIMDRSFNVVR 461
             L    Y+ TWKADGTRYMMLL   G YI+DRSF   R
Sbjct: 353 QLLRQRYYYATWKADGTRYMMLLTTDGCYIVDRSFRFRR 391

>ref|NP_572952.1| CG1810-PA [Drosophila melanogaster] gi|7292972|gb|AAF48361.1|
           CG1810-PA [Drosophila melanogaster]
           gi|33589334|gb|AAQ22434.1| RE70632p [Drosophila
           melanogaster]
          Length = 649

 Score = 60.5 bits (145), Expect = 9e-09
 Identities = 55/183 (30%), Positives = 75/183 (40%), Gaps = 37/183 (20%)
 Frame = +3

Query: 9   YINDLFKYYHETREPRVLTPRVPAW-----KGNDDA-----------------EDAADAA 122
           YIN+L+K Y +T       P  P W      GN D                  +DA +  
Sbjct: 179 YINELYKRYEDTNAAPA-APEQPNWCLDYDDGNGDGFVQDNSSSTSQQAGEQDDDAEEVE 237

Query: 123 NEDAGTEEDGGAA-APPAKEIHHEDIWSIGERVCGEEAEWIKMQVCGLLRLDSGGRGGSL 299
            EDAG + D   +   P K+   E I      + G         V G+ ++    R G L
Sbjct: 238 GEDAGGDCDASTSDGQPRKKRRREMIIKNATFMAG---------VPGVRQVSDQPRLGDL 288

Query: 300 R-------------FPGMQPVSLSLERMADLAAHRYHVTWKADGTRYMMLLLPQG-TYIM 437
           +             FPG QPVS+  E +  L+   Y V+WKADGTRYMML+  +   Y  
Sbjct: 289 QRKVQDWCDWKKNGFPGAQPVSMDRENIKRLSEIPYRVSWKADGTRYMMLIDGRDEVYFF 348

Query: 438 DRS 446
           DR+
Sbjct: 349 DRN 351



EST assemble image


clone accession position
1 LCL062c09_r AV629629 1 444
2 LCL062d08_r AV629634 21 463




Chlamydomonas reinhardtii
Kazusa DNA Research Institute