Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003264A_C01 KCC003264A_c01
(384 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_626261.1| putative ATP-binding RNA helicase [Streptomyces... 39 0.023
ref|ZP_00091698.1| COG0427: Acetyl-CoA hydrolase [Azotobacter vi... 36 0.12
ref|ZP_00056874.1| COG0596: Predicted hydrolases or acyltransfer... 35 0.26
ref|NP_787279.1| unknown [Tropheryma whipplei str. Twist] gi|284... 35 0.26
gb|AAQ82688.1| Epa4p [Candida glabrata] 35 0.34
>ref|NP_626261.1| putative ATP-binding RNA helicase [Streptomyces coelicolor A3(2)]
gi|7480489|pir||T35745 probable ATP-binding RNA helicase
- Streptomyces coelicolor gi|5689893|emb|CAB52056.1|
putative ATP-binding RNA helicase [Streptomyces
coelicolor A3(2)]
Length = 998
Score = 38.5 bits (88), Expect = 0.023
Identities = 27/62 (43%), Positives = 29/62 (46%)
Frame = +3
Query: 183 LPAAEPQAGQRRTTAGRTPSATGALDSTVDTGLHPARPRAGGQAEGHEAPEAGSGAGPRG 362
L AAEP AG TA + G S TG P R A G A G A A +GAG G
Sbjct: 442 LDAAEPGAGVSPRTAPGAAAPAGR--SGAGTGASPTRTSAPGHAGGGTAGPAAAGAGVPG 499
Query: 363 AD 368
AD
Sbjct: 500 AD 501
>ref|ZP_00091698.1| COG0427: Acetyl-CoA hydrolase [Azotobacter vinelandii]
Length = 864
Score = 36.2 bits (82), Expect = 0.12
Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Frame = +3
Query: 210 QRRTTAGRTPSATGALDSTVDTGLHPARPRA-------GGQAEGHEAPEAGSGAGPRGA 365
+RRT R P+A +HPARPR GG H PEAG GAG R A
Sbjct: 187 RRRTECLRRPAA-----------VHPARPRGRPRPAAPGGGVSAHRLPEAGRGAGLRQA 234
>ref|ZP_00056874.1| COG0596: Predicted hydrolases or acyltransferases (alpha/beta
hydrolase superfamily) [Thermobifida fusca]
Length = 354
Score = 35.0 bits (79), Expect = 0.26
Identities = 18/53 (33%), Positives = 25/53 (46%)
Frame = +3
Query: 201 QAGQRRTTAGRTPSATGALDSTVDTGLHPARPRAGGQAEGHEAPEAGSGAGPR 359
+A +RR +GR P +G + + PA PR G G E G GAG +
Sbjct: 50 RAPRRRGWSGRRPMTSGGRITPLSRWCMPASPRGGAAGAGRMRGEGGGGAGEK 102
>ref|NP_787279.1| unknown [Tropheryma whipplei str. Twist] gi|28476158|gb|AAO44248.1|
unknown [Tropheryma whipplei str. Twist]
Length = 460
Score = 35.0 bits (79), Expect = 0.26
Identities = 23/64 (35%), Positives = 30/64 (45%)
Frame = -3
Query: 379 AGVGSAPLGPAPLPASGAS*PSACPPARGLAGCKPVSTVESRAPVALGVRPAVVRR*PAC 200
A AP PAP A+ A+ P A P A A KP +T ++AP +PA + PA
Sbjct: 140 AAAKPAPAKPAPSEATQAAQPPAKPAAAKPAPAKPAATQATQAPKPAAAKPAPAK--PAA 197
Query: 199 GSAA 188
A
Sbjct: 198 AKPA 201
Score = 33.9 bits (76), Expect = 0.57
Identities = 24/73 (32%), Positives = 36/73 (48%), Gaps = 1/73 (1%)
Frame = -3
Query: 379 AGVGSAPLGPAPLPASGAS*PSACPPARGLAGCKPVSTVESRA-PVALGVRPAVVRR*PA 203
A AP PAP A+ A+ P A P A A KP +T ++A A +PA + PA
Sbjct: 196 AAAKPAPAKPAPSEATQAAQPPAKPAAAKPAPAKPAATQATQATKPAAPAKPAAAKPAPA 255
Query: 202 CGSAAGSSRCASP 164
+ + +++ A P
Sbjct: 256 KPAPSEATQAAQP 268
Score = 30.8 bits (68), Expect = 4.8
Identities = 21/71 (29%), Positives = 29/71 (40%)
Frame = -3
Query: 379 AGVGSAPLGPAPLPASGAS*PSACPPARGLAGCKPVSTVESRAPVALGVRPAVVRR*PAC 200
A AP PAP A+ A+ P A P A A KP + +PA + PA
Sbjct: 248 AAAKPAPAKPAPSEATQAAQPPAKPAAAKPAAAKPAPAKPAATQATQATKPAAPAK-PAA 306
Query: 199 GSAAGSSRCAS 167
A ++ +S
Sbjct: 307 AKPAAATHSSS 317
>gb|AAQ82688.1| Epa4p [Candida glabrata]
Length = 1416
Score = 34.7 bits (78), Expect = 0.34
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 231 RTPSATGALDSTVDTGLHPARPRAGGQAEGHEAPEA-GSGAGPRGADPTP 377
RT + T + ST+ T + P P GG P G G+G G P+P
Sbjct: 1195 RTVTFTNGIISTITTTIRPPSPNGGGSGNNGNTPSPNGGGSGNNGNTPSP 1244
