KCC003257A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003257A_C01 KCC003257A_c01
caccaacttccgccccggcaacccactgtacaacatctacccgctcaagctgtacaagcc
ggtgtacacgcaccacttcgTGCAGCTGCTGCTCACCAACTGGCGTAAGGGGACCAAGGA
CGCGCAGGGGCACTGGACGCTGCGGCCATGGGACAAAAAGTTCATCGACACAATCTACGC
GCCCAACGACCCGCTGTGTACGGCGCTCAAGTCGGCGTACGACAACAAGCTGAAGGACAC
GCAGGTTTACATCGAGAACAGCCAGGCCATGGAGGGCTGGGCCAAGAAGCAGCGGCAGAA
CCAGAACCTGGTGCTCAGCGCCTTTGTGTGCAACCCGCTGCTGCTGCACCGCTGGCCGGT
GTTCGTGCTCATGCATATCTTGCTGTACATCCGGGATACCGTCAAGGCCTGGTGGCGGCA
CGTGGGCTGAGAGTGGGACGCCTGGGGCGACCAGCACGGGCACAGCGTGGACGCACGTGC
GCTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003257A_C01 KCC003257A_c01
         (484 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_523475.2| Salivary gland secretion 1 CG3047-PA [Drosophil...    60  2e-08
pir||T46740 microfilarial sheath protein SHP3 [imported] - Litom...    57  2e-07
ref|XP_311331.1| ENSANGP00000001657 [Anopheles gambiae] gi|30177...    52  5e-06
gb|AAF43497.1|AF134579_1 arabinogalactan protein [Zea mays]            51  8e-06
gb|AAF06353.1|AF199413_1 thymidine kinase [Pseudorabies virus]         50  1e-05

>ref|NP_523475.2| Salivary gland secretion 1 CG3047-PA [Drosophila melanogaster]
           gi|28380257|gb|AAF50957.3| CG3047-PA [Drosophila
           melanogaster]
          Length = 1225

 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 55/161 (34%), Positives = 73/161 (45%), Gaps = 9/161 (5%)
 Frame = +3

Query: 3   PTSAPATHCTTSTRSSCTSRCTRTTSCSCCSPTGVRGPRTRRGTGRCGHGTKSSSTQST- 179
           PTS P T  TT+   +C+++ T+TT C+C   T      T   T R    T  S+T +T 
Sbjct: 190 PTS-PCTQETTTPTPTCSTQGTQTTPCTCAQTTTTPRSTTTTSTSRPTTTTPRSTTTTTT 248

Query: 180 -RPTTRCVR----RSSRRTTTS*RTRRFTSRTARPWRAGPRSSGRTRTWCSAPLCAT-RC 341
            RPTT   R     ++RR TT+      T+ T  P    PRS+  T T  S P   T RC
Sbjct: 249 SRPTTTTPRSTTTTTTRRPTTTTPRCTTTTSTCAPTTTTPRST--TTTTTSRPTTTTPRC 306

Query: 342 CCTAGRCSCSCIS--CCTSGIPSRPGGGTWAESGTPGATST 458
             T   CS +  +    T+   SRP   T   + TP  T T
Sbjct: 307 TTTTSTCSPTRTTPRSTTTTSTSRPTTTTPRCTTTPSTTCT 347

 Score = 52.0 bits (123), Expect = 4e-06
 Identities = 54/169 (31%), Positives = 77/169 (44%), Gaps = 16/169 (9%)
 Frame = +3

Query: 6    TSAPATHCTTSTRSSCTSRCT----RTTSCSCCSPTGVRGPRTRRGTGRCGHGT----KS 161
            TS P T    ST ++CTS  T    R+T+ +C S      PR+   T  C   T     +
Sbjct: 891  TSCPTTTTPRSTTTTCTSCPTTTTPRSTTTTCTSGPTTTTPRSTTKTSTCAPTTTTPRST 950

Query: 162  SSTQSTRPTTRCVR-----RSSRRTTTS*RTRRFTSRTARPWRAGPRSSGRTRTWCSAPL 326
            ++T ++RPTT   R      +SR TTT+ R+   T  T+RP    PRS+  T T  S P 
Sbjct: 951  TTTSTSRPTTTTPRSTTTTTTSRPTTTTPRSTT-TPSTSRPTTTTPRSTTTTST--SRPT 1007

Query: 327  CAT-RCCCTAGRCSCSCIS--CCTSGIPSRPGGGTWAESGTPGATSTGT 464
              T R       C+ +  +    T+   SRP       + TP +T+T T
Sbjct: 1008 TTTPRSTTKTSTCAPTTTTPRSTTTTTTSRP------TTTTPRSTTTTT 1050

 Score = 51.6 bits (122), Expect = 5e-06
 Identities = 55/170 (32%), Positives = 75/170 (43%), Gaps = 19/170 (11%)
 Frame = +3

Query: 6   TSAPATHCTTSTR--SSCTSRCTRTTSCSCCSP--------TGVRGPRTRRGTGRCGHGT 155
           T+ P +  TT+TR  ++ T RCT TT  S C+P        T     R    T RC   T
Sbjct: 253 TTTPRSTTTTTTRRPTTTTPRCTTTT--STCAPTTTTPRSTTTTTTSRPTTTTPRCTTTT 310

Query: 156 KSSSTQSTRPTTRCVRRSSRRTTTS*R--TRRFTSRTARPWRAGPRSSGRTRTWCSAPLC 329
            + S   T P +     +SR TTT+ R  T   T+ T RP    PRS+  T T  S P  
Sbjct: 311 STCSPTRTTPRSTTTTSTSRPTTTTPRCTTTPSTTCTRRPTTTTPRST--TTTCTSGPTT 368

Query: 330 ----ATRCCCTAGRCSC---SCISCCTSGIPSRPGGGTWAESGTPGATST 458
               +T   CT+G  +    S  +  TSG P+     +   + T G T+T
Sbjct: 369 TTPRSTTTTCTSGPTTTTPRSTTTTSTSG-PTTTTPRSTTTTSTSGPTTT 417

 Score = 49.7 bits (117), Expect = 2e-05
 Identities = 46/148 (31%), Positives = 65/148 (43%), Gaps = 16/148 (10%)
 Frame = +3

Query: 6    TSAPATHCTTSTR--SSCTSRCTRTTSCSCCSPTGVRGPRTRRGTGRCGHGTKSSSTQST 179
            T+ P +  TTST   ++ T R T TTS S  + T  R   T   +G      +S++T ST
Sbjct: 752  TTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTST 811

Query: 180  RPTTRCVRRSSRRTTTS*RT-----RRFTSRTARPWRAGPRSSGRTRTWCSAPLC--ATR 338
               T    RS+  T+TS  T        T+ T+ P    PRS+  T T C       +T 
Sbjct: 812  SGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSCPTTTTPRSTT 871

Query: 339  CCCTAG-------RCSCSCISCCTSGIP 401
              CT+G         + +C SC T+  P
Sbjct: 872  TTCTSGPTTTTPRSTTTTCTSCPTTTTP 899

 Score = 48.9 bits (115), Expect = 3e-05
 Identities = 51/168 (30%), Positives = 70/168 (41%), Gaps = 12/168 (7%)
 Frame = +3

Query: 6    TSAPATHCTTSTR--SSCTSRCTRTTSCSCCSPTGVRGPRTRRGTGRCGHGTKSSSTQST 179
            T+ P +  TTST   ++ T R T TTS S  + T  R   T   +G      +S++T ST
Sbjct: 784  TTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTST 843

Query: 180  RPTTRCVRRSSRRTTTS*RT-----RRFTSRTARPWRAGPRSSGRTRTWC---SAPLCAT 335
               T    RS+  T+TS  T        T+ T+ P    PRS+  T T C   + P   T
Sbjct: 844  SGPTTTTPRSTTTTSTSCPTTTTPRSTTTTCTSGPTTTTPRSTTTTCTSCPTTTTPRSTT 903

Query: 336  RCC--CTAGRCSCSCISCCTSGIPSRPGGGTWAESGTPGATSTGTAWT 473
              C  C       S  + CTSG  +     T   S     T+T  + T
Sbjct: 904  TTCTSCPTTTTPRSTTTTCTSGPTTTTPRSTTKTSTCAPTTTTPRSTT 951

 Score = 45.8 bits (107), Expect = 3e-04
 Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
 Frame = +3

Query: 6    TSAPATHCTTSTRSSCTSRCT----RTTSCSCCSPTGVRGPRTRRGTGRCGHGTKSSSTQ 173
            TS P T    ST ++CTS  T    R+T+ +C S      PR+   T  C  G  +++ +
Sbjct: 875  TSGPTTTTPRSTTTTCTSCPTTTTPRSTTTTCTSCPTTTTPRST--TTTCTSGPTTTTPR 932

Query: 174  STRPTTRCVRRSSRRTTTS*RTRRFTSRTARPWRAGPRSSGRTRT 308
            ST  T+ C       TTT+ R+   TS T+RP    PRS+  T T
Sbjct: 933  STTKTSTCA-----PTTTTPRSTTTTS-TSRPTTTTPRSTTTTTT 971

 Score = 45.4 bits (106), Expect = 3e-04
 Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
 Frame = +3

Query: 3    PTSAPATHCTTSTRS---SCTSRCTRTTSCS---CCSPTGVRGPRTRRGTGRCGHGTKSS 164
            PT+      TT++ S   + T R T TT+ S     +P     P T R T      T ++
Sbjct: 942  PTTTTPRSTTTTSTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTPSTSRPTTTTPRSTTTT 1001

Query: 165  STQSTRPTTRCVRRSSRR-----TTTS*RTRRFTSRTARPWRAGPRSSGRT---RTWCSA 320
            ST  +RPTT   R +++      TTT+ R+   T+ T+RP    PRS+  T   R   + 
Sbjct: 1002 ST--SRPTTTTPRSTTKTSTCAPTTTTPRSTT-TTTTSRPTTTTPRSTTTTTTSRPTTTT 1058

Query: 321  PLCATRCCCTAGRCSCSCISCCTSGIPSRPGGGTWAESGTPGATSTGTA 467
            P   T  C    R + +     T+   SRP   T   + TP  T+T +A
Sbjct: 1059 PRSTTTPC--TSRPTTTTPRSTTTTTTSRPTTTTPRSTTTPCPTTTPSA 1105

 Score = 45.4 bits (106), Expect = 3e-04
 Identities = 51/171 (29%), Positives = 72/171 (41%), Gaps = 20/171 (11%)
 Frame = +3

Query: 6   TSAPATHCT----TSTRSSCTSRCT--------RTTSCSCCSPTGVRGPRTRRGTGRCGH 149
           T+ P+T CT    T+T  S T+ CT        R+T+ +C S      PR+   T   G 
Sbjct: 339 TTTPSTTCTRRPTTTTPRSTTTTCTSGPTTTTPRSTTTTCTSGPTTTTPRSTTTTSTSGP 398

Query: 150 GT---KSSSTQSTRPTTRCVRRSSRRTTTS*RT-----RRFTSRTARPWRAGPRSSGRTR 305
            T   +S++T ST   T    RS+  T+TS  T        T+ T+ P    PRS+  T 
Sbjct: 399 TTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTS 458

Query: 306 TWCSAPLCATRCCCTAGRCSCSCISCCTSGIPSRPGGGTWAESGTPGATST 458
           T  S P   T    T    S    +   S   +   G T   + TP +T+T
Sbjct: 459 T--SGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPT---TTTPRSTTT 504

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 45/132 (34%), Positives = 59/132 (44%), Gaps = 10/132 (7%)
 Frame = +3

Query: 3    PTSAPATHCTTSTRSSCTSRCTR-TTSCSCCSPTGVRGPR--TRRGTGRCGHGTKSSSTQ 173
            PT+      TT++ S  T+   R TT  S C+PT    PR  T   T R    T  S+T 
Sbjct: 990  PTTTTPRSTTTTSTSRPTTTTPRSTTKTSTCAPT-TTTPRSTTTTTTSRPTTTTPRSTTT 1048

Query: 174  ST--RPTTRCVRR-----SSRRTTTS*RTRRFTSRTARPWRAGPRSSGRTRTWCSAPLCA 332
            +T  RPTT   R      +SR TTT+ R+   T+ T+RP    PRS+       +     
Sbjct: 1049 TTTSRPTTTTPRSTTTPCTSRPTTTTPRSTT-TTTTSRPTTTTPRSTTTPCPTTTPSASP 1107

Query: 333  TRCCCTAGRCSC 368
            TR   T   C C
Sbjct: 1108 TRTTTTRRPCPC 1119

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 58/180 (32%), Positives = 73/180 (40%), Gaps = 24/180 (13%)
 Frame = +3

Query: 6    TSAPATHCTTSTRSSCTSRCTRTT-----SCSCCSPTGVRGPR--TRRGTGRCGHGTKSS 164
            TS P T    ST ++CTS  T TT       S C+PT    PR  T   T R    T  S
Sbjct: 907  TSCPTTTTPRSTTTTCTSGPTTTTPRSTTKTSTCAPTTTT-PRSTTTTSTSRPTTTTPRS 965

Query: 165  STQST--RPTTRCVRRSS------------RRTTTS*RTRRFTSRTARPWRAGPRSSGRT 302
            +T +T  RPTT   R ++            R TTT        + T+RP    PRS+ +T
Sbjct: 966  TTTTTTSRPTTTTPRSTTTPSTSRPTTTTPRSTTT--------TSTSRPTTTTPRSTTKT 1017

Query: 303  RTWCSAPLCAT---RCCCTAGRCSCSCISCCTSGIPSRPGGGTWAESGTPGATSTGTAWT 473
             T   AP   T       T  R + +     T+   SRP   T   + TP  TS  T  T
Sbjct: 1018 ST--CAPTTTTPRSTTTTTTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTP-CTSRPTTTT 1074

 Score = 43.1 bits (100), Expect = 0.002
 Identities = 50/167 (29%), Positives = 70/167 (40%), Gaps = 10/167 (5%)
 Frame = +3

Query: 3    PTSAPATHCTTSTRS---SCTSRCTRTTSCSCCSPTGVRGPRTRRGTGRCGHGTKSSSTQ 173
            PT+      TT++ S   + T R T TTS SC + T  R   T   +G      +S++T 
Sbjct: 830  PTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSCPTTTTPRSTTTTCTSGPTTTTPRSTTTT 889

Query: 174  STRPTTRCVRRSSRRTTTS*RT-----RRFTSRTARPWRAGPRSSGRTRTWCSAPLCATR 338
             T   T    RS+  T TS  T        T+ T+ P    PRS+ +T T C+      R
Sbjct: 890  CTSCPTTTTPRSTTTTCTSCPTTTTPRSTTTTCTSGPTTTTPRSTTKTST-CAPTTTTPR 948

Query: 339  CCCT--AGRCSCSCISCCTSGIPSRPGGGTWAESGTPGATSTGTAWT 473
               T    R + +     T+   SRP   T   + TP +TS  T  T
Sbjct: 949  STTTTSTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTP-STSRPTTTT 994

 Score = 40.0 bits (92), Expect = 0.015
 Identities = 47/160 (29%), Positives = 66/160 (40%), Gaps = 8/160 (5%)
 Frame = +3

Query: 3    PTSAPATHCTTSTRS---SCTSRCTRTTSCSCCSPTGVRGPRTRRGTGRCGHGTKSSSTQ 173
            PT+      TT++ S   + T R T TTS S  + T  R   T   +G      +S++T 
Sbjct: 558  PTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTT 617

Query: 174  STRPTTRCVRRSSRRTTTS*RT-----RRFTSRTARPWRAGPRSSGRTRTWCSAPLCATR 338
            ST   T    RS+  T+TS  T        T+ T+ P    PRS+  T T  S P   T 
Sbjct: 618  STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTST--SGPTTTTP 675

Query: 339  CCCTAGRCSCSCISCCTSGIPSRPGGGTWAESGTPGATST 458
               T    S    +   S   +   G T   + TP +T+T
Sbjct: 676  RSTTTTSTSGPTTTTPRSTTTTSTSGPT---TTTPRSTTT 712

 Score = 40.0 bits (92), Expect = 0.015
 Identities = 47/160 (29%), Positives = 66/160 (40%), Gaps = 8/160 (5%)
 Frame = +3

Query: 3   PTSAPATHCTTSTRS---SCTSRCTRTTSCSCCSPTGVRGPRTRRGTGRCGHGTKSSSTQ 173
           PT+      TT++ S   + T R T TTS S  + T  R   T   +G      +S++T 
Sbjct: 382 PTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTT 441

Query: 174 STRPTTRCVRRSSRRTTTS*RT-----RRFTSRTARPWRAGPRSSGRTRTWCSAPLCATR 338
           ST   T    RS+  T+TS  T        T+ T+ P    PRS+  T T  S P   T 
Sbjct: 442 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTST--SGPTTTTP 499

Query: 339 CCCTAGRCSCSCISCCTSGIPSRPGGGTWAESGTPGATST 458
              T    S    +   S   +   G T   + TP +T+T
Sbjct: 500 RSTTTTSTSGPTTTTPRSTTTTSTSGPT---TTTPRSTTT 536

 Score = 40.0 bits (92), Expect = 0.015
 Identities = 47/160 (29%), Positives = 66/160 (40%), Gaps = 8/160 (5%)
 Frame = +3

Query: 3   PTSAPATHCTTSTRS---SCTSRCTRTTSCSCCSPTGVRGPRTRRGTGRCGHGTKSSSTQ 173
           PT+      TT++ S   + T R T TTS S  + T  R   T   +G      +S++T 
Sbjct: 510 PTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTT 569

Query: 174 STRPTTRCVRRSSRRTTTS*RT-----RRFTSRTARPWRAGPRSSGRTRTWCSAPLCATR 338
           ST   T    RS+  T+TS  T        T+ T+ P    PRS+  T T  S P   T 
Sbjct: 570 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTST--SGPTTTTP 627

Query: 339 CCCTAGRCSCSCISCCTSGIPSRPGGGTWAESGTPGATST 458
              T    S    +   S   +   G T   + TP +T+T
Sbjct: 628 RSTTTTSTSGPTTTTPRSTTTTSTSGPT---TTTPRSTTT 664

 Score = 40.0 bits (92), Expect = 0.015
 Identities = 47/160 (29%), Positives = 66/160 (40%), Gaps = 8/160 (5%)
 Frame = +3

Query: 3   PTSAPATHCTTSTRS---SCTSRCTRTTSCSCCSPTGVRGPRTRRGTGRCGHGTKSSSTQ 173
           PT+      TT++ S   + T R T TTS S  + T  R   T   +G      +S++T 
Sbjct: 430 PTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTT 489

Query: 174 STRPTTRCVRRSSRRTTTS*RT-----RRFTSRTARPWRAGPRSSGRTRTWCSAPLCATR 338
           ST   T    RS+  T+TS  T        T+ T+ P    PRS+  T T  S P   T 
Sbjct: 490 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTST--SGPTTTTP 547

Query: 339 CCCTAGRCSCSCISCCTSGIPSRPGGGTWAESGTPGATST 458
              T    S    +   S   +   G T   + TP +T+T
Sbjct: 548 RSTTTTSTSGPTTTTPRSTTTTSTSGPT---TTTPRSTTT 584

 Score = 40.0 bits (92), Expect = 0.015
 Identities = 47/160 (29%), Positives = 66/160 (40%), Gaps = 8/160 (5%)
 Frame = +3

Query: 3    PTSAPATHCTTSTRS---SCTSRCTRTTSCSCCSPTGVRGPRTRRGTGRCGHGTKSSSTQ 173
            PT+      TT++ S   + T R T TTS S  + T  R   T   +G      +S++T 
Sbjct: 670  PTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTT 729

Query: 174  STRPTTRCVRRSSRRTTTS*RT-----RRFTSRTARPWRAGPRSSGRTRTWCSAPLCATR 338
            ST   T    RS+  T+TS  T        T+ T+ P    PRS+  T T  S P   T 
Sbjct: 730  STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTST--SGPTTTTP 787

Query: 339  CCCTAGRCSCSCISCCTSGIPSRPGGGTWAESGTPGATST 458
               T    S    +   S   +   G T   + TP +T+T
Sbjct: 788  RSTTTTSTSGPTTTTPRSTTTTSTSGPT---TTTPRSTTT 824

 Score = 40.0 bits (92), Expect = 0.015
 Identities = 47/160 (29%), Positives = 66/160 (40%), Gaps = 8/160 (5%)
 Frame = +3

Query: 3    PTSAPATHCTTSTRS---SCTSRCTRTTSCSCCSPTGVRGPRTRRGTGRCGHGTKSSSTQ 173
            PT+      TT++ S   + T R T TTS S  + T  R   T   +G      +S++T 
Sbjct: 590  PTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTT 649

Query: 174  STRPTTRCVRRSSRRTTTS*RT-----RRFTSRTARPWRAGPRSSGRTRTWCSAPLCATR 338
            ST   T    RS+  T+TS  T        T+ T+ P    PRS+  T T  S P   T 
Sbjct: 650  STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTST--SGPTTTTP 707

Query: 339  CCCTAGRCSCSCISCCTSGIPSRPGGGTWAESGTPGATST 458
               T    S    +   S   +   G T   + TP +T+T
Sbjct: 708  RSTTTTSTSGPTTTTPRSTTTTSTSGPT---TTTPRSTTT 744

 Score = 40.0 bits (92), Expect = 0.015
 Identities = 47/160 (29%), Positives = 66/160 (40%), Gaps = 8/160 (5%)
 Frame = +3

Query: 3   PTSAPATHCTTSTRS---SCTSRCTRTTSCSCCSPTGVRGPRTRRGTGRCGHGTKSSSTQ 173
           PT+      TT++ S   + T R T TTS S  + T  R   T   +G      +S++T 
Sbjct: 398 PTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTT 457

Query: 174 STRPTTRCVRRSSRRTTTS*RT-----RRFTSRTARPWRAGPRSSGRTRTWCSAPLCATR 338
           ST   T    RS+  T+TS  T        T+ T+ P    PRS+  T T  S P   T 
Sbjct: 458 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTST--SGPTTTTP 515

Query: 339 CCCTAGRCSCSCISCCTSGIPSRPGGGTWAESGTPGATST 458
              T    S    +   S   +   G T   + TP +T+T
Sbjct: 516 RSTTTTSTSGPTTTTPRSTTTTSTSGPT---TTTPRSTTT 552

 Score = 39.7 bits (91), Expect = 0.019
 Identities = 53/186 (28%), Positives = 69/186 (36%), Gaps = 29/186 (15%)
 Frame = +3

Query: 3    PTSAPATHCTTSTRS---SCTSRCTRTTSCSCCSPTGVRGPRTRRGTGRCGHGTKSSSTQ 173
            PT+      TT++ S   + T R T TTS S  + T  R   T   +G      +S++T 
Sbjct: 718  PTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTT 777

Query: 174  STRPTTRCVRRSSRRTTTS*RT-----RRFTSRTARPWRAGPRSS--------------G 296
            ST   T    RS+  T+TS  T        T+ T+ P    PRS+               
Sbjct: 778  STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 837

Query: 297  RTRTWCSAPLCATRCCCTAGRCSC-------SCISCCTSGIPSRPGGGTWAESGTPGATS 455
             T T  S P   T    T    SC       S  + CTSG  +     T   S T   TS
Sbjct: 838  TTTTSTSGPTTTTPRSTTTTSTSCPTTTTPRSTTTTCTSGPTT-----TTPRSTTTTCTS 892

Query: 456  TGTAWT 473
              T  T
Sbjct: 893  CPTTTT 898

 Score = 39.3 bits (90), Expect = 0.025
 Identities = 47/160 (29%), Positives = 65/160 (40%), Gaps = 8/160 (5%)
 Frame = +3

Query: 3   PTSAPATHCTTSTRS---SCTSRCTRTTSCSCCSPTGVRGPRTRRGTGRCGHGTKSSSTQ 173
           PT+      TT+  S   + T R T TTS S  + T  R   T   +G      +S++T 
Sbjct: 366 PTTTTPRSTTTTCTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTT 425

Query: 174 STRPTTRCVRRSSRRTTTS*RT-----RRFTSRTARPWRAGPRSSGRTRTWCSAPLCATR 338
           ST   T    RS+  T+TS  T        T+ T+ P    PRS+  T T  S P   T 
Sbjct: 426 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTST--SGPTTTTP 483

Query: 339 CCCTAGRCSCSCISCCTSGIPSRPGGGTWAESGTPGATST 458
              T    S    +   S   +   G T   + TP +T+T
Sbjct: 484 RSTTTTSTSGPTTTTPRSTTTTSTSGPT---TTTPRSTTT 520

 Score = 37.4 bits (85), Expect = 0.094
 Identities = 47/185 (25%), Positives = 70/185 (37%), Gaps = 26/185 (14%)
 Frame = +3

Query: 6   TSAPATHCTTSTRSSCTSRCTRTTSCSCCS------------------PTGVRGPRTRRG 131
           T +     T +     T  CT T  C+C                    PT      T   
Sbjct: 142 TDSTTDRTTVTNTDWTTPLCTDTPPCTCSEESSTAIPSSPCIDTSTVIPTSPCTQETTTP 201

Query: 132 TGRCG-HGTKSS----STQSTRPTTRCVRRSSRRTTTS*RTRRFTSRTARPWRAGPRSSG 296
           T  C   GT+++    +  +T P +     +SR TTT+ R+   T+ T+RP    PRS+ 
Sbjct: 202 TPTCSTQGTQTTPCTCAQTTTTPRSTTTTSTSRPTTTTPRSTT-TTTTSRPTTTTPRST- 259

Query: 297 RTRTWCSAPLCAT-RCCCTAGRCSCSCIS--CCTSGIPSRPGGGTWAESGTPGATSTGTA 467
            T T    P   T RC  T   C+ +  +    T+   SRP       + TP  T+T + 
Sbjct: 260 -TTTTTRRPTTTTPRCTTTTSTCAPTTTTPRSTTTTTTSRP------TTTTPRCTTTTST 312

Query: 468 WTHVR 482
            +  R
Sbjct: 313 CSPTR 317

 Score = 36.6 bits (83), Expect = 0.16
 Identities = 32/109 (29%), Positives = 46/109 (41%), Gaps = 3/109 (2%)
 Frame = +3

Query: 156 KSSSTQSTRPTTRCVRRSSRRT---TTS*RTRRFTSRTARPWRAGPRSSGRTRTWCSAPL 326
           K+   +STR TT+  +R  R+T   TT   T+R T RT R     P++   T     +P+
Sbjct: 69  KTKRPKSTRRTTKRTKRPRRKTTKWTTKRATKRTTKRTTRRRPTTPKTPDTT----DSPI 124

Query: 327 CATRCCCTAGRCSCSCISCCTSGIPSRPGGGTWAESGTPGATSTGTAWT 473
                  T   C+CS  +  +S            +S T   T T T WT
Sbjct: 125 TT-----TGAECTCSDRTTASS-----------TDSTTDRTTVTNTDWT 157

>pir||T46740 microfilarial sheath protein SHP3 [imported] - Litomosoides
           sigmodontis gi|6012073|gb|AAB82017.2| microfilarial
           sheath protein SHP3 [Litomosoides sigmodontis]
          Length = 354

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 47/158 (29%), Positives = 71/158 (44%)
 Frame = +3

Query: 6   TSAPATHCTTSTRSSCTSRCTRTTSCSCCSPTGVRGPRTRRGTGRCGHGTKSSSTQSTRP 185
           T++  T  TTS  SS T   T +T+ S   PT  +   T + +     GT  SST +T  
Sbjct: 116 TTSSTTKPTTSKTSSTTKTTTASTTSSTTKPTTSKTSSTTKSSTSKTSGTTKSSTPATSA 175

Query: 186 TTRCVRRSSRRTTTS*RTRRFTSRTARPWRAGPRSSGRTRTWCSAPLCATRCCCTAGRCS 365
           +T  V   S    TS  T   T+++  P  +   +SG T++  S    +T    T    S
Sbjct: 176 STTTVTTKSTTPATSVSTTTVTTKSTTPATSVSTTSGTTKSTTSTTSVSTTSGTTKSTTS 235

Query: 366 CSCISCCTSGIPSRPGGGTWAESGTPGATSTGTAWTHV 479
            + +S  TSG  ++    T + S T G T + T+ T V
Sbjct: 236 TTSVS-TTSG-TTKSTTSTTSVSTTSGTTKSTTSTTSV 271

 Score = 50.8 bits (120), Expect = 8e-06
 Identities = 44/162 (27%), Positives = 78/162 (47%), Gaps = 4/162 (2%)
 Frame = +3

Query: 6   TSAPATHCTTSTRSSCTSRCTRTTSCSCCSPTGVRGPRTRRGTGRCGHGTKSSSTQSTRP 185
           T++  T  TT   +S TS  T+TT+ S  S T    P T + +      T S+++ +T+P
Sbjct: 66  TTSSTTSSTTKPTTSKTSSTTKTTTASTTSST--TKPTTSKTSSTTKTTTASTTSSTTKP 123

Query: 186 TTRCVRRSSRRT---TTS*RTRRFTSRTARPWRAG-PRSSGRTRTWCSAPLCATRCCCTA 353
           TT     +++ T   TTS  T+  TS+T+   ++   ++SG T++   A   +T    T 
Sbjct: 124 TTSKTSSTTKTTTASTTSSTTKPTTSKTSSTTKSSTSKTSGTTKSSTPATSASTTTVTTK 183

Query: 354 GRCSCSCISCCTSGIPSRPGGGTWAESGTPGATSTGTAWTHV 479
                + +S  T+ + ++      + S T G T + T+ T V
Sbjct: 184 STTPATSVS--TTTVTTKSTTPATSVSTTSGTTKSTTSTTSV 223

 Score = 40.0 bits (92), Expect = 0.015
 Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 3/157 (1%)
 Frame = +3

Query: 6   TSAPATHCTTST---RSSCTSRCTRTTSCSCCSPTGVRGPRTRRGTGRCGHGTKSSSTQS 176
           +S PAT  +T+T   +S+  +    TT+ +  S T      T  GT +    T S ST  
Sbjct: 168 SSTPATSASTTTVTTKSTTPATSVSTTTVTTKSTTPATSVSTTSGTTKSTTSTTSVST-- 225

Query: 177 TRPTTRCVRRSSRRTTTS*RTRRFTSRTARPWRAGPRSSGRTRTWCSAPLCATRCCCTAG 356
           T  TT+    ++  +TTS  T+  TS T     +   +SG T++  S    +T    T  
Sbjct: 226 TSGTTKSTTSTTSVSTTSGTTKSTTSTT-----SVSTTSGTTKSTTSTTSVSTTSGTT-- 278

Query: 357 RCSCSCISCCTSGIPSRPGGGTWAESGTPGATSTGTA 467
           + + S IS     I + P G    +  T   +S G A
Sbjct: 279 KSTTSMISTTGPSISTTPAGTGSTKVRTSTTSSPGKA 315

 Score = 40.0 bits (92), Expect = 0.015
 Identities = 36/153 (23%), Positives = 65/153 (41%)
 Frame = +3

Query: 9   SAPATHCTTSTRSSCTSRCTRTTSCSCCSPTGVRGPRTRRGTGRCGHGTKSSSTQSTRPT 188
           S+  T  TT  +++ T+   +TTS +  + T      T+  T      T SS+T+ T   
Sbjct: 26  SSSTTSTTTPAKTTSTTTTAKTTSKTTKTTTVKTSTTTKTTTS----STTSSTTKPTTSK 81

Query: 189 TRCVRRSSRRTTTS*RTRRFTSRTARPWRAGPRSSGRTRTWCSAPLCATRCCCTAGRCSC 368
           T    +++  +TTS  T+  TS+T+   +    S+  + T  +    ++    T    + 
Sbjct: 82  TSSTTKTTTASTTSSTTKPTTSKTSSTTKTTTASTTSSTTKPTTSKTSSTTKTTTASTTS 141

Query: 369 SCISCCTSGIPSRPGGGTWAESGTPGATSTGTA 467
           S     TS   S     T   SGT  +++  T+
Sbjct: 142 STTKPTTSKTSSTTKSSTSKTSGTTKSSTPATS 174

>ref|XP_311331.1| ENSANGP00000001657 [Anopheles gambiae] gi|30177813|gb|EAA06779.2|
           ENSANGP00000001657 [Anopheles gambiae str. PEST]
          Length = 283

 Score = 51.6 bits (122), Expect = 5e-06
 Identities = 54/171 (31%), Positives = 74/171 (42%), Gaps = 18/171 (10%)
 Frame = +3

Query: 9   SAPATHCTTSTRSS--CTSRCTRTTSCSCCSPTGVRGPRTRRGTGRCGHGTKSSST---Q 173
           S+  T CT+ST SS  CTS C+  TS    S T      +  GT  C  GT SSS+    
Sbjct: 63  SSGTTSCTSSTSSSNSCTSSCSSGTSSRSSSTTS-----SSSGTSSCSSGTTSSSSCASS 117

Query: 174 STRPTTRCVR-RSSRRTTTS*RTRRFTSRT-------ARPWRAGPRSSGRTRTWC----- 314
            +  T+ C    SS R+ TS  +   TS +       +        +S  + T C     
Sbjct: 118 CSSSTSSCSSGTSSCRSGTSSCSSCTTSCSCCTSSCSSCASSCSSCASSSSTTSCSCCAS 177

Query: 315 SAPLCATRCCCTAGRCSCSCISCCTSGIPSRPGGGTWAESGTPGATSTGTA 467
           S+  CA+ C   A  CS SC S C+SG  S     +   S T  ++S  T+
Sbjct: 178 SSSSCASSCSSCASSCS-SCASSCSSGTTSSSSCASSCSSSTSSSSSGTTS 227

 Score = 49.3 bits (116), Expect = 2e-05
 Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 2/156 (1%)
 Frame = +3

Query: 6   TSAPATHCTTSTRSSCTSRCTR-TTSCSCCSPTGVRGPRTRRG-TGRCGHGTKSSSTQST 179
           +SA ++    +T S CT+ C+  T+SCS  + +G  G  +    T  C  GT S S+   
Sbjct: 1   SSASSSSSGATTSSCCTTSCSSGTSSCSSSTSSGSSGTTSCSSCTSSCSSGTSSCSSA-- 58

Query: 180 RPTTRCVRRSSRRTTTS*RTRRFTSRTARPWRAGPRSSGRTRTWCSAPLCATRCCCTAGR 359
             T+ C   ++  T+++  +   TS  +    +G  S   + T  S+    T  C +   
Sbjct: 59  --TSSCSSGTTSCTSSTSSSNSCTSSCS----SGTSSRSSSTTSSSS---GTSSCSSGTT 109

Query: 360 CSCSCISCCTSGIPSRPGGGTWAESGTPGATSTGTA 467
            S SC S C+S   S   G +   SGT   +S  T+
Sbjct: 110 SSSSCASSCSSSTSSCSSGTSSCRSGTSSCSSCTTS 145

 Score = 48.9 bits (115), Expect = 3e-05
 Identities = 35/129 (27%), Positives = 52/129 (40%), Gaps = 7/129 (5%)
 Frame = +3

Query: 27  CTTSTRSSCTSRCTR------TTSCSCCSPTGVRGPRTRRGTGRCGHGTKSSSTQSTRPT 188
           C TS+ SSC S C+       TTSCSCC+ +      +            SS +  T  +
Sbjct: 148 CCTSSCSSCASSCSSCASSSSTTSCSCCASSSSSCASSCSSCASSCSSCASSCSSGTTSS 207

Query: 189 TRCVRRSSRRTTTS*R-TRRFTSRTARPWRAGPRSSGRTRTWCSAPLCATRCCCTAGRCS 365
           + C    S  T++S   T   +S T          S  T + CS    ++ C  +   C+
Sbjct: 208 SSCASSCSSSTSSSSSGTTSCSSGTTSSSCCTSSCSSSTSSSCSGTTASSSCASSCSSCA 267

Query: 366 CSCISCCTS 392
            SC S  +S
Sbjct: 268 SSCSSSTSS 276

 Score = 44.3 bits (103), Expect = 8e-04
 Identities = 43/156 (27%), Positives = 63/156 (39%), Gaps = 23/156 (14%)
 Frame = +3

Query: 6   TSAPATHCTTSTRSSCTSRCTR--------TTSCSCCSPTGVRGPRT-RRGTGRCGHGTK 158
           + A  + C T++ SS TS C+         TTSCS C+ +   G  +    T  C  GT 
Sbjct: 8   SGATTSSCCTTSCSSGTSSCSSSTSSGSSGTTSCSSCTSSCSSGTSSCSSATSSCSSGT- 66

Query: 159 SSSTQSTRPTTRCVRRSSRRTTTS*RTRRFTSRTARPWRAGPRSSGRTRTWCSAPLCA-- 332
           +S T ST  +  C    S  T++   +   +S       +G  SS    + CS+   +  
Sbjct: 67  TSCTSSTSSSNSCTSSCSSGTSSRSSSTTSSSSGTSSCSSGTTSSSSCASSCSSSTSSCS 126

Query: 333 --TRCC------CTAGRCSCSCI----SCCTSGIPS 404
             T  C      C++   SCSC     S C S   S
Sbjct: 127 SGTSSCRSGTSSCSSCTTSCSCCTSSCSSCASSCSS 162

>gb|AAF43497.1|AF134579_1 arabinogalactan protein [Zea mays]
          Length = 274

 Score = 50.8 bits (120), Expect = 8e-06
 Identities = 47/154 (30%), Positives = 68/154 (43%), Gaps = 1/154 (0%)
 Frame = +3

Query: 6   TSAPATHCTTSTRSSCTSRCTRT-TSCSCCSPTGVRGPRTRRGTGRCGHGTKSSSTQSTR 182
           ++A AT  T++   + TS C+ T TS S  + +    P    GT R    +  SST ++ 
Sbjct: 10  SAATATPSTSTAAGTPTSACSPTATSTSTRTSSASTAPTACPGTSRGSRPSPCSSTATS- 68

Query: 183 PTTRCVRRSSRRTTTS*RTRRFTSRTARPWRAGPRSSGRTRTWCSAPLCATRCCCTAGRC 362
            +T    R  R TTTS       +  + PW A P +S R  T    P    RC   A   
Sbjct: 69  -STSAPGRRPRGTTTS-------TAWSSPWTASPCASCREPTPRGRPAPCRRCPSPAPAR 120

Query: 363 SCSCISCCTSGIPSRPGGGTWAESGTPGATSTGT 464
             +C S  T+G PS P     ++  +PG T T +
Sbjct: 121 PTACSSRSTAGSPSGPTPCP-SQRRSPGCTGTAS 153

 Score = 34.3 bits (77), Expect = 0.80
 Identities = 31/111 (27%), Positives = 41/111 (36%), Gaps = 11/111 (9%)
 Frame = +3

Query: 12  APATHCTTSTRSSCTSRCTRTTSCSCCSPTGVRGPRTRRG-TGRCGHGTKSSST-----Q 173
           AP   C +   +  T+  +R+T+ S   PT     R   G TG     T +S T      
Sbjct: 108 APCRRCPSPAPARPTACSSRSTAGSPSGPTPCPSQRRSPGCTGTASRPTTASRTLTWPSS 167

Query: 174 STRPTTRCVRRSSRRTTTS*RTRRFTSRTARPWRA-----GPRSSGRTRTW 311
           S R    C   S+RRT  +  T   +     PW        P SS  T  W
Sbjct: 168 SARSPPTCTAWSARRTAPTTSTGSMSRPQCPPWEGTATTPRPASSPLTAPW 218

>gb|AAF06353.1|AF199413_1 thymidine kinase [Pseudorabies virus]
          Length = 297

 Score = 50.4 bits (119), Expect = 1e-05
 Identities = 46/138 (33%), Positives = 55/138 (39%), Gaps = 10/138 (7%)
 Frame = +3

Query: 60  RCTRTTSCSCCSPTGVRGPRTRRGTGR-CGHGTKSSSTQ-------STRPTTRCVRRSSR 215
           R TRT++C  C+P    G    R   R C   T   ST+       +   TT   RR+S 
Sbjct: 153 RWTRTSTCGACAPARAPGSTWTRACSRACATSTPCWSTRRATLARGAAGATTGGARRAST 212

Query: 216 RTTTS*RTRRFTSRTARPWRAGPR--SSGRTRTWCSAPLCATRCCCTAGRCSCSCISCCT 389
           R   +    R TS  AR      R  SS RTR   SA     R  CT GR + S  SCC 
Sbjct: 213 RPCAT--ASRSTSSAARATAPSSRTPSSARTRRPSSATGAGARSRCTRGRWTRSWPSCCR 270

Query: 390 SGIPSRPGGGTWAESGTP 443
              P    G   A +  P
Sbjct: 271 CASPPSTWGLRRASAPRP 288

 Score = 35.0 bits (79), Expect = 0.47
 Identities = 29/85 (34%), Positives = 40/85 (46%), Gaps = 2/85 (2%)
 Frame = +3

Query: 27  CTTSTRSSCTSRCTRTTSCSCCSPTGVRGPRTRRGTGRCGHGTKSSSTQS--TRPTTRCV 200
           C T++RS  TS   R T+ S  +P+     RTRR +   G G +S  T+   TR    C 
Sbjct: 215 CATASRS--TSSAARATAPSSRTPSSA---RTRRPSSATGAGARSRCTRGRWTRSWPSCC 269

Query: 201 RRSSRRTTTS*RTRRFTSRTARPWR 275
           R +S  +T   R     +   RPWR
Sbjct: 270 RCASPPSTWGLR----RASAPRPWR 290



EST assemble image


clone accession position
1 LCL099b10_r AV631751 1 484
2 LCL060c02_r AV629522 154 438




Chlamydomonas reinhardtii
Kazusa DNA Research Institute