Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003253A_C01 KCC003253A_c01
(660 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|... 45 2e-05
ref|ZP_00140569.1| COG3712: Fe2+-dicitrate sensor, membrane comp... 49 9e-05
ref|NP_650744.1| CG7709-PA [Drosophila melanogaster] gi|7300427|... 47 3e-04
ref|NP_823399.1| putative protoporphyrinogen oxidase [Streptomyc... 46 4e-04
ref|NP_627107.1| putative membrane protein [Streptomyces coelico... 45 7e-04
>ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|dbj|BAC45786.1|
blr0521 [Bradyrhizobium japonicum USDA 110]
Length = 745
Score = 45.1 bits (105), Expect(2) = 2e-05
Identities = 56/173 (32%), Positives = 67/173 (38%), Gaps = 11/173 (6%)
Frame = -2
Query: 530 TPAPSRTESC----PAAPTRLQGVCSPASTAAAAPAPPSALGRCSRTATGLHRRRRSGMW 363
TPAP+ T + PAAPT G +PA+T A P P + TAT
Sbjct: 190 TPAPTATPTPVAPPPAAPTARPGSPAPAATPAPTPTP-------APTAT----------- 231
Query: 362 LLPGCSWRAAGTRCTACCGMPARPPVARAGA--QGHRPPRETRART-QAPGRSATTGLSP 192
A T A P PP R GA G RP A + APG + +P
Sbjct: 232 --------PAPTATPAPGSTPGAPPAGRPGAPPPGVRPGSPPAAGSPPAPGATPAPTTTP 283
Query: 191 GLILGRSALPPSPSPG-AHRPGTGLHR*ARKAKTAGSPS---*PYRPGSRPGP 45
G +A PPS PG A P G A A A + P RPG+ P P
Sbjct: 284 A--PGGTATPPSGRPGPASTPAPGAATPAPTATPAPGGALTPPPGRPGAGPTP 334
Score = 33.9 bits (76), Expect(2) = 0.095
Identities = 45/145 (31%), Positives = 54/145 (37%), Gaps = 9/145 (6%)
Frame = -2
Query: 533 TTPAPSRTESCPA-----APTRLQGVCSPASTAAAAPA----PPSALGRCSRTATGLHRR 381
TTPAP T + P+ A T G +PA TA AP PP R G
Sbjct: 281 TTPAPGGTATPPSGRPGPASTPAPGAATPAPTATPAPGGALTPPPG-----RPGAGPTPG 335
Query: 380 RRSGMWLLPGCSWRAAGTRCTACCGMPARPPVARAGAQGHRPPRETRARTQAPGRSATTG 201
+ G P AAGT PA PP A G P AR AP +A
Sbjct: 336 PQGGT---PPAGAPAAGT--------PAAPPQA-----GGLP-----ARPAAPAGAA--- 371
Query: 200 LSPGLILGRSALPPSPSPGAHRPGT 126
+P + G +A P P+ P T
Sbjct: 372 -APSTVPGSAAATPPPNRAQFAPPT 395
Score = 32.3 bits (72), Expect = 6.4
Identities = 42/142 (29%), Positives = 52/142 (36%), Gaps = 3/142 (2%)
Frame = -2
Query: 461 ASTAAAAP-APPSALGRCSRTATGLHRRRRSGMWLLPGCSWRAAGTRCTACCGMPARPPV 285
A+TA+ A A P + + TG + + PG + AA R PA PP
Sbjct: 20 ANTASHAQGASPLVVAQAQPQETGPDGKPKQPPKGPPGAAPPAAPAR-------PAAPPP 72
Query: 284 ARAGAQGHRPPRETRAR--TQAPGRSATTGLSPGLILGRSALPPSPSPGAHRPGTGLHR* 111
A A PP A AP R A P R A PP P P A
Sbjct: 73 AAA------PPHPPAAPPPAAAPPRPAAPPPPPPPPAARPAPPPPPPPPAAPKQPSPPPA 126
Query: 110 ARKAKTAGSPS*PYRPGSRPGP 45
A + A +P P P +RP P
Sbjct: 127 AAPQQHAPTPPPPAPPAARPAP 148
Score = 25.0 bits (53), Expect(2) = 2e-05
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 660 PVAPPMRSSAPQPPAAP 610
P APP AP PPA P
Sbjct: 138 PPAPPAARPAPTPPAPP 154
Score = 23.5 bits (49), Expect(2) = 0.095
Identities = 10/23 (43%), Positives = 12/23 (51%)
Frame = -1
Query: 660 PVAPPMRSSAPQPPAAPDCSTEP 592
P +PP S P P A P +T P
Sbjct: 261 PGSPPAAGSPPAPGATPAPTTTP 283
>ref|ZP_00140569.1| COG3712: Fe2+-dicitrate sensor, membrane component [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 532
Score = 48.5 bits (114), Expect = 9e-05
Identities = 60/196 (30%), Positives = 75/196 (37%), Gaps = 31/196 (15%)
Frame = +1
Query: 43 GGPGLLPGLYGYDGLPAVFAFLAQRCRPVPG-----LCAPGLGLGGSADRP---RIKPGL 198
G PG P +G G P + R RP PG L APG GG+ P R +PG
Sbjct: 36 GLPGPAPA-HGKPGQP-LGRLPGDRRRPGPGTVPALLAAPGRPGGGAWQLPPAQRAQPGH 93
Query: 199 RPVV--------------ADLPGACVRARVSRGGRWPCAPAR------ATGGRAGIPQQA 318
RP+ PG R+R GR P AP R A A P Q+
Sbjct: 94 RPLAWRRIAAAATGRLAAGAAPGRAGRSRAGARGRRPVAPGRGRLARPARADPADFPAQS 153
Query: 319 VQRVPAARQLQPGSSHMPERRRRWRPVAVREQRPRADGGAGAAAAVLAGEHTPCSR---V 489
R P R +PG + P+RR + + RPR G AG+ P
Sbjct: 154 HPR-PHLRGDRPGHAAFPKRRGK-----TYDARPRRLQGEPGRPGRRAGKERPAMTRPDS 207
Query: 490 GAAGHDSVLDGAGVVW 537
AA +D VL+ VW
Sbjct: 208 DAAPYDPVLEQTAQVW 223
Score = 37.0 bits (84), Expect = 0.26
Identities = 55/204 (26%), Positives = 67/204 (31%), Gaps = 46/204 (22%)
Frame = -2
Query: 521 PSRTESCPAAPTRLQGVC--------SPASTAAAAPAPPSALGRCSRTATGLHRRRR--- 375
PS T++ P R C +P +A P P A G+ + L RR
Sbjct: 3 PSLTDARPRPTLRPAPGCLAGRRRGGAPRGSAQGLPGPAPAHGKPGQPLGRLPGDRRRPG 62
Query: 374 ---------------SGMWLLPGC----------SWR---AAGTRCTACCGMPARPPVAR 279
G W LP +WR AA T A P R +R
Sbjct: 63 PGTVPALLAAPGRPGGGAWQLPPAQRAQPGHRPLAWRRIAAAATGRLAAGAAPGRAGRSR 122
Query: 278 AGAQGHRPPRETRARTQAPGRSATTGLSPGLILGRSALPPSPSPGAHRPG-------TGL 120
AGA+G RP R R P R+ P +S P P RPG G
Sbjct: 123 AGARGRRPVAPGRGRLARPARA-----DPADFPAQS--HPRPHLRGDRPGHAAFPKRRGK 175
Query: 119 HR*ARKAKTAGSPS*PYRPGSRPG 48
AR + G P RPG R G
Sbjct: 176 TYDARPRRLQGEPG---RPGRRAG 196
>ref|NP_650744.1| CG7709-PA [Drosophila melanogaster] gi|7300427|gb|AAF55584.1|
CG7709-PA [Drosophila melanogaster]
Length = 950
Score = 46.6 bits (109), Expect = 3e-04
Identities = 56/188 (29%), Positives = 74/188 (38%), Gaps = 1/188 (0%)
Frame = -2
Query: 602 APSPQTSHRFCGHGCSSIRCCCQTTPA-PSRTESCPAAPTRLQGVCSPASTAAAAPAPPS 426
AP+P +S +G + PA PS + PAAP+ G +P S + APAPPS
Sbjct: 295 APAPPSS----SYGAPAAPSSSYGAPAAPSSSYGAPAAPSSSYGAPAPPSKSYGAPAPPS 350
Query: 425 ALGRCSRTATGLHRRRRSGMWLLPGCSWRAAGTRCTACCGMPARPPVARAGAQGHRPPRE 246
S + G P S+ A ++ G PA PP GA PP +
Sbjct: 351 -----SSYGAPAAPSKSYGAPAPPSSSYGAPAPP-SSSYGAPA-PPSPSYGAPA--PPSK 401
Query: 245 TRARTQAPGRSATTGLSPGLILGRSALPPSPSPGAHRPGTGLHR*ARKAKTAGSPS*PYR 66
+ P S +P G A PPS S GA P + + G+PS
Sbjct: 402 SYGAPAPPSSSYGAPAAPSKSYGAPA-PPSSSYGAPAP---------PSSSYGAPS---A 448
Query: 65 PGSRPGPP 42
P S GPP
Sbjct: 449 PSSSYGPP 456
Score = 44.7 bits (104), Expect = 0.001
Identities = 49/177 (27%), Positives = 69/177 (38%), Gaps = 10/177 (5%)
Frame = -2
Query: 536 QTTPAPSRTESCPAAPTRLQGVCSPASTAAAAPAPPSALGRCSRTATGLHRRRRSGMWLL 357
++ P+ S PAAP+ G +P S++ APA PS+ G
Sbjct: 274 KSAPSSSYGAPRPAAPSSSYGAPAPPSSSYGAPAAPSS---------------SYGAPAA 318
Query: 356 PGCSWRAAGTRCTACCGMPARPPVARAGAQGHRPPRETRARTQAPGRSATTGLSPGLILG 177
P S+ A ++ G PA PP GA PP + AP +S P G
Sbjct: 319 PSSSYGAPAAP-SSSYGAPA-PPSKSYGAPA--PPSSSYGAPAAPSKSYGAPAPPSSSYG 374
Query: 176 RSA---------LPPSPSPGAHRPGTGLH-R*ARKAKTAGSPS*PYRPGSRPGPPCS 36
A PPSPS GA P + + A + + G+P+ P + P PP S
Sbjct: 375 APAPPSSSYGAPAPPSPSYGAPAPPSKSYGAPAPPSSSYGAPAAPSKSYGAPAPPSS 431
Score = 35.8 bits (81), Expect = 0.58
Identities = 43/163 (26%), Positives = 63/163 (38%), Gaps = 1/163 (0%)
Frame = -2
Query: 521 PSRTESCPAAPTRLQGVCSPASTAAAAPAPPSALGRCSRTATGLHRRRRSGMWLLPGCSW 342
PS++ P + + +P S + APAPPS+ ++A P S+
Sbjct: 236 PSQSYGAPPSASYGPPKSAPPSQSYGAPAPPSSKYGPPKSA--------------PSSSY 281
Query: 341 RAAGTRC-TACCGMPARPPVARAGAQGHRPPRETRARTQAPGRSATTGLSPGLILGRSAL 165
A ++ G PA PP + GA P + AP S +P G A
Sbjct: 282 GAPRPAAPSSSYGAPA-PPSSSYGAPA--APSSSYGAPAAPSSSYGAPAAPSSSYGAPA- 337
Query: 164 PPSPSPGAHRPGTGLHR*ARKAKTAGSPS*PYRPGSRPGPPCS 36
PPS S GA P + + G+P+ P + P PP S
Sbjct: 338 PPSKSYGAPAPPSSSY---------GAPAAPSKSYGAPAPPSS 371
>ref|NP_823399.1| putative protoporphyrinogen oxidase [Streptomyces avermitilis
MA-4680] gi|29605870|dbj|BAC69934.1| putative
protoporphyrinogen oxidase [Streptomyces avermitilis
MA-4680]
Length = 474
Score = 46.2 bits (108), Expect = 4e-04
Identities = 62/208 (29%), Positives = 71/208 (33%), Gaps = 30/208 (14%)
Frame = -2
Query: 545 CCCQTTPAPSRTESCPAAPTRLQGVCSPASTAAAAPAPPSALGRCSRTATGL---HRRR- 378
CC P P S PA+ TR SP+ TAA PA P A +TG HRR
Sbjct: 292 CCAPRHPPPR--PSWPASSTR-PWRWSPSPTAAVGPASPKAAASSCLPSTGAPSRHRRSP 348
Query: 377 -RSG---------MWLLPGCSWRAAGT----------------RCTACCGMPARPPVARA 276
RSG W C+ R+ GT R T C PA PP R+
Sbjct: 349 PRSGAGSRTRTPTCWC---CARRSGGTARRRSSAGTTPASWTSRATTCARRPAWPP-RRS 404
Query: 275 GAQGHRPPRETRARTQAPGRSATTGLSPGLILGRSALPPSPSPGAHRPGTGLHR*ARKAK 96
A P R+ SATT P + P SPS +
Sbjct: 405 PAASPAGPTACRSTP-----SATTRAWPASATTSPSCPASPSAA--------------RR 445
Query: 95 TAGSPS*PYRPGSRPGPPCSWRCCCRRW 12
T S S P P P P SW R W
Sbjct: 446 TTASASRPASPARTP-PWSSWAATARGW 472
Score = 36.2 bits (82), Expect = 0.45
Identities = 50/178 (28%), Positives = 62/178 (34%), Gaps = 29/178 (16%)
Frame = +3
Query: 12 PTPATAAPTTR--RSGPAPW----PVRLRRAAS-CFRFSGSTMQTRPRPVCSRAGARRQ- 167
P P+ A +TR R P+P P + AAS C +G+ + R P S AG+R +
Sbjct: 300 PRPSWPASSTRPWRWSPSPTAAVGPASPKAAASSCLPSTGAPSRHRRSPPRSGAGSRTRT 359
Query: 168 ---------------------C*PAQDQARAQTRCR*PAWCLRPSARFPRRPVALCTRAC 284
PA +RA T R PAW P R P A T AC
Sbjct: 360 PTCWCCARRSGGTARRRSSAGTTPASWTSRATTCARRPAW---PPRRSPAASPAGPT-AC 415
Query: 285 DRRPCRHTAASSTACTCSPPATAWQQPHARAPAAVEASCCP*TAPKS*RWCRRCCGRT 458
P T A + T SP A R A+ P P W G T
Sbjct: 416 RSTPSATTRAWPASATTSPSCPASPSAARRTTASASRPASPARTPPWSSWAATARGWT 473
>ref|NP_627107.1| putative membrane protein [Streptomyces coelicolor A3(2)]
gi|7635985|emb|CAB88820.1| putative membrane protein
[Streptomyces coelicolor A3(2)]
Length = 551
Score = 45.4 bits (106), Expect = 7e-04
Identities = 36/106 (33%), Positives = 48/106 (44%)
Frame = -2
Query: 524 APSRTESCPAAPTRLQGVCSPASTAAAAPAPPSALGRCSRTATGLHRRRRSGMWLLPGCS 345
AP + PAA +PA+ + PA P++ + TA+GL RRRS P +
Sbjct: 436 APGEPVAEPAAAPATSPAGAPAAASVPDPATPTSAATTATTASGLTVRRRSA---APAPA 492
Query: 344 WRAAGTRCTACCGMPARPPVARAGAQGHRPPRETRARTQAPGRSAT 207
R A T P RP VA A A G R R+ + AP +AT
Sbjct: 493 RRPAAPDDTE----PGRPAVAAAWAAGTRRGRDGEQPSPAPAGTAT 534
