>KCC003243A_C01 KCC003243A_c01
gagagagagagaactagtctcgagttttttttttttttttttCAAAAAACAGATCCTTCA
AACAGGGCAGCTTCAGACGGGGCTCCGAAGGCATCCACAGCCCCCATCGCCCCGTACTGT
GCCACCGCACGGCCAGCGCCGGTTAGTTCAGTGTCTCTCCAACCATAGGAGAAGCACCTC
CCTTGTCCGCGCCGACCACCAGCGCACACGCCCACCACCGTATCCACAACGGCAGTGCAC
CGTGCCTGGCTTCTCGTCAACGCCTCGGCACTCGGACATGCCACAACCATAGTGGCCCAC
CGCGAGTCCTCGGCCTGATTCCCCCGAACGTCACGTCATCGTACAGAGGCGAGCCGCATC
CACAGTGGCATCACCCCCGCACCCATCCGTGCAAGTCCCTCCACGCCACAGCGCGGATGC
GCACCACATCCACAGTGGTAACGCATCGCCCGGGCCACTTCAATACCACACCGCAGCACC
CGGCTGTCGTCATATCCACAATGACGAGCCG

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003243A_C01 KCC003243A_c01
         (511 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix prote...    45  4e-04
ref|XP_066136.1| similar to basic proline-rich protein [Homo sap...    45  5e-04
dbj|BAB55745.1| OSJNBa0025P13.4 [Oryza sativa (japonica cultivar...    45  5e-04
gb|AAH27297.1| Ccnk protein [Mus musculus]                             44  0.001
ref|XP_194862.2| cyclin K [Mus musculus]                               44  0.001

>ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix protein;
            plenty-of-prolines-101; serine/arginine repetitive matrix
            protein 1 [Rattus norvegicus]
          Length = 958

 Score = 45.4 bits (106), Expect = 4e-04
 Identities = 45/148 (30%), Positives = 55/148 (36%), Gaps = 6/148 (4%)
 Frame = +2

Query: 86   RRHPQPPSPRTVPPHGQRRLVQCLSNHRRSTSLVRADHQRTRPPPYPQRQCTVPGFSSTP 265
            RR P P  P   PP  +RR        R  T   R    R  P P P+R+   P   S P
Sbjct: 606  RRSPSPAPPPPPPPPPRRR--------RSPTPPPR----RRTPSPPPRRRSPSPRRYSPP 653

Query: 266  ---RHSDMPQP*WPTASPRPDSPERHVIVQRRAASTVASPPHPSVQVPP---RHSADAHH 427
               R+S  P P   TASP P  P+R           V+  P P  + PP   R S     
Sbjct: 654  IQRRYSPSPPPKRRTASP-PPPPKRRASPSPPPKRRVSHSPPPKQRSPPVTKRRSPSLSS 712

Query: 428  IHSGNASPGPLQYHTAAPGCRHIHNDEP 511
             H   +SPG       +P     H+  P
Sbjct: 713  KHRKGSSPGRSTREARSPQPNKRHSPSP 740

 Score = 35.0 bits (79), Expect = 0.55
 Identities = 43/147 (29%), Positives = 53/147 (35%), Gaps = 23/147 (15%)
 Frame = +2

Query: 86   RRHPQPP------SPRTVPPHGQRRLVQCLSNHRRSTSLVRADHQRTRPPPYPQRQCT-- 241
            RR P PP      SPR   P  QRR        RR+ S      +R  P P P+R+ +  
Sbjct: 633  RRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHS 692

Query: 242  --------------VPGFSSTPRHSDMP-QP*WPTASPRPDSPERHVIVQRRAASTVASP 376
                           P  SS  R    P +      SP+P+  +RH    R  A   +SP
Sbjct: 693  PPPKQRSPPVTKRRSPSLSSKHRKGSSPGRSTREARSPQPN--KRHSPSPRPRAPQTSSP 750

Query: 377  PHPSVQVPPRHSADAHHIHSGNASPGP 457
            P      P R  A A     G  SP P
Sbjct: 751  P------PVRRGASAS--PQGRQSPSP 769

>ref|XP_066136.1| similar to basic proline-rich protein [Homo sapiens]
          Length = 352

 Score = 45.1 bits (105), Expect = 5e-04
 Identities = 45/140 (32%), Positives = 53/140 (37%), Gaps = 9/140 (6%)
 Frame = +2

Query: 92  HPQP-PSPRTVPPHGQRRLVQCLSNHRRSTSLVRADHQRTRPPPYPQRQCTVPGFSSTPR 268
           HP P P PR V P G           +    +    +    P P PQ +  VP   + P 
Sbjct: 176 HPSPLPQPRHVVPAGPNAPGHPSPLPQPRHVVPAGPNAPGHPSPLPQPRHVVPAGPNAPG 235

Query: 269 H-SDMPQP*W-----PTAS--PRPDSPERHVIVQRRAASTVASPPHPSVQVPPRHSADAH 424
           H S +PQP       P A   P P    RHV+     A     P HPS    PRH   A 
Sbjct: 236 HPSPLPQPRHVVPAGPNAPGHPSPLPQPRHVVPAGPNA-----PGHPSPLPQPRHVVPAG 290

Query: 425 HIHSGNASPGPLQYHTAAPG 484
              SG+ SP P   H A  G
Sbjct: 291 PSISGHPSPLPQPRHVAPAG 310

 Score = 34.7 bits (78), Expect = 0.71
 Identities = 29/92 (31%), Positives = 33/92 (35%), Gaps = 1/92 (1%)
 Frame = +2

Query: 212 PPPYPQRQCTVPGFSSTPRH-SDMPQP*WPTASPRPDSPERHVIVQRRAASTVASPPHPS 388
           P P PQ     P   + P H S +PQP             RHV+     A     P HPS
Sbjct: 137 PSPLPQPHHVAPAGPNAPGHPSPLPQP-------------RHVVPAGPNA-----PGHPS 178

Query: 389 VQVPPRHSADAHHIHSGNASPGPLQYHTAAPG 484
               PRH   A     G+ SP P   H    G
Sbjct: 179 PLPQPRHVVPAGPNAPGHPSPLPQPRHVVPAG 210

 Score = 32.7 bits (73), Expect = 2.7
 Identities = 24/87 (27%), Positives = 32/87 (36%), Gaps = 10/87 (11%)
 Frame = +2

Query: 254 SSTPRHSDMPQP*WPTASPRPDSPERHVIVQRRAASTV----------ASPPHPSVQVPP 403
           S  P  S    P W +A P P  P +   + + A +            ++P HPS    P
Sbjct: 84  SLVPYTSGSESPLWASAKPHPRLPPKSDFMPQCAMTVPQPYHVSPAGPSAPGHPSPLPQP 143

Query: 404 RHSADAHHIHSGNASPGPLQYHTAAPG 484
            H A A     G+ SP P   H    G
Sbjct: 144 HHVAPAGPNAPGHPSPLPQPRHVVPAG 170

>dbj|BAB55745.1| OSJNBa0025P13.4 [Oryza sativa (japonica cultivar-group)]
          Length = 420

 Score = 45.1 bits (105), Expect = 5e-04
 Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 14/127 (11%)
 Frame = +2

Query: 89  RHPQPPSPRTVPPHGQRRLVQCLSNHRRSTSLVRADHQRTRPPPYPQRQCTVPGFSST-- 262
           RH +PP+P T PP  +RR ++C  +H R  ++  A   R+  P  P    +V   ++T  
Sbjct: 276 RHCKPPAPPTQPPQRRRRALRCRRDHHRGKTISSA-WIRSPMPASPLDPASVANLTATSI 334

Query: 263 ------------PRHSDMPQP*WPTASPRPDSPERHVIVQRRAASTVASPPHPSVQVPPR 406
                        + S MP    P+ SP P  P         A +T     HP+   P R
Sbjct: 335 PAAISNPAADAPSKRSSMPPARTPSLSPSPPPPPPS--SPSSAPATTNCRRHPTTFHPRR 392

Query: 407 HSADAHH 427
           H    HH
Sbjct: 393 H----HH 395

>gb|AAH27297.1| Ccnk protein [Mus musculus]
          Length = 554

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 40/149 (26%), Positives = 58/149 (38%), Gaps = 3/149 (2%)
 Frame = +2

Query: 44  KKQILQTGQLQTGLRRHPQPPSPRTVPPHGQRRLVQCLSNHRRSTSLVRADHQRTRPPPY 223
           +K   Q+ Q Q    + P+ PSP+  PP   +R V             + +++ T PPP 
Sbjct: 304 QKDSQQSAQQQQQQAQQPKKPSPQPSPPRQAKRAV---------VVSPKEENKATEPPPP 354

Query: 224 PQRQCTVPGFSSTPRHSDMPQP*WPTASPRPD--SPERHVIVQRRAASTVASPPHPSVQV 397
           P+    +P   +T        P  P A P PD   P    + +  A   V +   P VQ+
Sbjct: 355 PK----IPKLEAT-------HPPLPPAHPPPDRKPPLAPALGEAEATGPVETSDLPKVQI 403

Query: 398 -PPRHSADAHHIHSGNASPGPLQYHTAAP 481
            PP H A  H        P PL +    P
Sbjct: 404 PPPAHPAPVH-------QPPPLPHRPPPP 425

>ref|XP_194862.2| cyclin K [Mus musculus]
          Length = 554

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 40/149 (26%), Positives = 58/149 (38%), Gaps = 3/149 (2%)
 Frame = +2

Query: 44  KKQILQTGQLQTGLRRHPQPPSPRTVPPHGQRRLVQCLSNHRRSTSLVRADHQRTRPPPY 223
           +K   Q+ Q Q    + P+ PSP+  PP   +R V             + +++ T PPP 
Sbjct: 304 QKDSQQSAQQQQQQAQQPKKPSPQPSPPRQAKRAV---------VVSPKEENKATEPPPP 354

Query: 224 PQRQCTVPGFSSTPRHSDMPQP*WPTASPRPD--SPERHVIVQRRAASTVASPPHPSVQV 397
           P+    +P   +T        P  P A P PD   P    + +  A   V +   P VQ+
Sbjct: 355 PK----IPKLEAT-------HPPLPPAHPPPDRKPPLAPALGEAEATGPVETSDLPKVQI 403

Query: 398 -PPRHSADAHHIHSGNASPGPLQYHTAAP 481
            PP H A  H        P PL +    P
Sbjct: 404 PPPAHPAPVH-------QPPPLPHRPPPP 425

EST assemble image

clone accession position 1 LCL054h08_r AV629233 1 511 2 LCL100f12_r AV631843 43 163

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