Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003242A_C01 KCC003242A_c01
(529 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC60504.2| action potential broadening potassium channel [Ap... 38 0.092
prf||2011375A K channel 38 0.092
pir||S22697 extensin - Volvox carteri (fragment) gi|21992|emb|CA... 37 0.16
ref|XP_326526.1| hypothetical protein [Neurospora crassa] gi|113... 37 0.20
emb|CAD70305.1| conserved hypothetical protein [Neurospora crassa] 36 0.27
>gb|AAC60504.2| action potential broadening potassium channel [Aplysia sp.]
Length = 905
Score = 37.7 bits (86), Expect = 0.092
Identities = 43/147 (29%), Positives = 56/147 (37%), Gaps = 19/147 (12%)
Frame = +2
Query: 116 GA*QSRCPAEPTA--------ARRSTVVNSRTTCPAP--------PRTATATPASA---R 238
G SR P+ P++ A ST+ + R P P P +AT+ P S R
Sbjct: 8 GGGSSRGPSSPSSSADACRELAPLSTLRDPREASPTPAAQGVPTTPSSATSAPPSGSCLR 67
Query: 239 VHNTCKLVEQNWHPHAVCAFSTVTSGTGLPPTDQPGAPEG*HFRHHQGRLGFKPSPGHRT 418
K +E HA A + ++ L GAP HHQG P PG
Sbjct: 68 SRGDQKRLEVKIASHAPSAPTPSSTAGSLISMGGAGAPVDHPHHHHQGG---GPPPGQAP 124
Query: 419 LLPLPATDQRRHLGTSASPPLPCGLAR 499
LPLPA R + PP +AR
Sbjct: 125 PLPLPA-QGRYYPNPDPQPPDAYAIAR 150
>prf||2011375A K channel
Length = 905
Score = 37.7 bits (86), Expect = 0.092
Identities = 43/147 (29%), Positives = 56/147 (37%), Gaps = 19/147 (12%)
Frame = +2
Query: 116 GA*QSRCPAEPTA--------ARRSTVVNSRTTCPAP--------PRTATATPASA---R 238
G SR P+ P++ A ST+ + R P P P +AT+ P S R
Sbjct: 8 GGGSSRGPSSPSSSADACRELAPLSTLRDPREASPTPAAQGVPTTPSSATSAPPSGSCLR 67
Query: 239 VHNTCKLVEQNWHPHAVCAFSTVTSGTGLPPTDQPGAPEG*HFRHHQGRLGFKPSPGHRT 418
K +E HA A + ++ L GAP HHQG P PG
Sbjct: 68 SRGDQKRLEVKIASHAPSAPTPSSTAGSLISMGGAGAPVDHPHHHHQGG---GPPPGQAP 124
Query: 419 LLPLPATDQRRHLGTSASPPLPCGLAR 499
LPLPA R + PP +AR
Sbjct: 125 PLPLPA-QGRYYPNPDPQPPDAYAIAR 150
>pir||S22697 extensin - Volvox carteri (fragment) gi|21992|emb|CAA46283.1|
extensin [Volvox carteri]
Length = 464
Score = 37.0 bits (84), Expect = 0.16
Identities = 33/117 (28%), Positives = 47/117 (39%), Gaps = 1/117 (0%)
Frame = +2
Query: 164 STVVNSRTTCPAPPRTATATPASARVHNTCKLVEQNWHPHAVCAFSTV-TSGTGLPPTDQ 340
+ VV + + P PPR +T+ P ARV ++ ++ P + + S V T+ LP T
Sbjct: 213 AVVVQTTPSPPPPPRVSTSPPPPARVSSSPPPATRSPPPRRITSPSPVLTASPPLPKTSP 272
Query: 341 PGAPEG*HFRHHQGRLGFKPSPGHRTLLPLPATDQRRHLGTSASPPLPCGLARPGVP 511
P P PSP P P R S SPP P ++ P P
Sbjct: 273 PPPPR------------VPPSPPPPVASPPPPPPPR----VSPSPPPPQPVSSPPPP 313
>ref|XP_326526.1| hypothetical protein [Neurospora crassa] gi|11359668|pir||T48707
related to regulatory protein wetA [imported] -
Neurospora crassa gi|11544665|emb|CAB88506.2| related to
regulatory protein wetA [Neurospora crassa]
gi|28923193|gb|EAA32409.1| hypothetical protein
[Neurospora crassa]
Length = 963
Score = 36.6 bits (83), Expect = 0.20
Identities = 22/58 (37%), Positives = 27/58 (45%)
Frame = +2
Query: 356 G*HFRHHQGRLGFKPSPGHRTLLPLPATDQRRHLGTSASPPLPCGLARPGVPHHACRP 529
G H HH+G +G+ P P PLPA + H G AS L+ P PHH P
Sbjct: 755 GFHHPHHRGVMGYPPMP------PLPAHHLQAHHGPGAS-----SLSPPPPPHHHHHP 801
>emb|CAD70305.1| conserved hypothetical protein [Neurospora crassa]
Length = 458
Score = 36.2 bits (82), Expect = 0.27
Identities = 40/133 (30%), Positives = 49/133 (36%), Gaps = 14/133 (10%)
Frame = +2
Query: 152 AARRSTVVNSRTTCPAPPRTATATPASARVHNTCKLVEQNWHPHAVCAFSTVTS----GT 319
AA T V++ +T PAP + TP+ RV P A T +
Sbjct: 297 AAASPTSVSTGSTRPAPVNESPTTPSRQRVMTP--------RPPATTPARTPATFRVYND 348
Query: 320 GLPPTDQPGAPEG*HFRHHQGRL----GFKPSPGHRTLLPL----PATDQ--RRHLGTSA 469
LP + QP P+ HQ RL F G RT L P T Q RR
Sbjct: 349 SLPASSQPRTPQNLPEARHQSRLVGQGSFTVPAGWRTSFSLEQRTPTTSQALRRMRHGGR 408
Query: 470 SPPLPCGLARPGV 508
P P GL PG+
Sbjct: 409 REPSPQGLRTPGM 421
