>KCC003241A_C01 KCC003241A_c01
ataagtatcactcgttagggagggcttgcgctctgattgcagcagcggcaagttgtccca
gcaatcctctccagtgatcaCTCGTATAATAAATAGTCTTGAAACATCTAGGAGCGGCTG
AGCTAATTACTTGAATGTTCCTGAGGCCCCATTCCAGGTTTTGCTCATTTCAGACCATTG
TCCATGGCCGCACGAGTAAGCGAGGTGCGAAGGCGGAGCACGGGGAATGAGACAGCGCGT
TACCAATGGCAAGCGCGTTTGCTGGTGCAATGTAAATTTCCACCATCCCATCGGTGGCCT
CTGTGCGGTGCTACCCAGCGTCGCTGCGCCAATGCGGTATGTGGTATGTCATATGCAACG
GGCGCCCTCCCAAGTAGAAAGTGCCTGTGTTTCGGCGCCGCTCCCCGCCCCAAGGCAGCG
ATACGCCCGCCCACAAGGGCACCTACCCCTGCCCCT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003241A_C01 KCC003241A_c01
         (456 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|ZP_00005070.1| COG0741: Soluble lytic murein transglycosylas...    35  0.30
ref|ZP_00139773.1| COG1629: Outer membrane receptor proteins, mo...    34  0.87
ref|XP_332010.1| hypothetical protein [Neurospora crassa] gi|289...    33  1.1
ref|ZP_00009817.1| COG2885: Outer membrane protein and related p...    33  1.5
ref|NP_004747.1| numb homolog (Drosophila)-like; numb (Drosophil...    32  4.3

>ref|ZP_00005070.1| COG0741: Soluble lytic murein transglycosylase and related
           regulatory proteins (some contain LysM/invasin domains)
           [Rhodobacter sphaeroides]
          Length = 405

 Score = 35.4 bits (80), Expect = 0.30
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +3

Query: 318 ASLRQCGMWYVICNGRPPK*KVPVFRRRSPPQGSDTPAHKGTYP 449
           A LR CG W ++    P   + P  RRR+PP+ +      G++P
Sbjct: 66  AQLRDCGKWVLVPANLPRPGREPSLRRRAPPRLAGKQGQAGSFP 109

>ref|ZP_00139773.1| COG1629: Outer membrane receptor proteins, mostly Fe transport
           [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 1048

 Score = 33.9 bits (76), Expect = 0.87
 Identities = 20/55 (36%), Positives = 25/55 (45%)
 Frame = +1

Query: 280 PPSHRWPLCGATQRRCANAVCGMSYATGALPSRKCLCFGAAPRPKAAIRPPTRAP 444
           P   RW       RRCANA  G S +T + P+R+  C    P   +   PP  AP
Sbjct: 32  PGCCRWAPAPVAGRRCANASNGTSGSTPSSPARR-PCASPTPPSTSVSTPPPSAP 85

>ref|XP_332010.1| hypothetical protein [Neurospora crassa] gi|28925781|gb|EAA34786.1|
           hypothetical protein [Neurospora crassa]
          Length = 1168

 Score = 33.5 bits (75), Expect = 1.1
 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
 Frame = +1

Query: 214 RSTGNETARYQWQARLLVQCKFPPSHRWPLCGATQRRCANAVC-GMSYATGALPSRKCLC 390
           ++TGN T+ +   ++ L     PP+  WP+  + +R     V  G + ATG         
Sbjct: 20  QATGNITSHHPSNSKQLASSAKPPAQAWPISDSARRIVTPTVSQGQATATG--------- 70

Query: 391 FGAAPRPKAAIRPPTRAPTPAP 456
                R K A +P T A T  P
Sbjct: 71  -----RAKTASKPTTSATTSRP 87

>ref|ZP_00009817.1| COG2885: Outer membrane protein and related
           peptidoglycan-associated (lipo)proteins
           [Rhodopseudomonas palustris]
          Length = 689

 Score = 33.1 bits (74), Expect = 1.5
 Identities = 23/59 (38%), Positives = 24/59 (39%)
 Frame = +1

Query: 280 PPSHRWPLCGATQRRCANAVCGMSYATGALPSRKCLCFGAAPRPKAAIRPPTRAPTPAP 456
           P   R P  GA          GM+   G  P R     G  P P AA  PP  APTPAP
Sbjct: 212 PGERRGPPPGAPGTPPNATAPGMTPPPGEAPRR-----GPPPPPAAANPPPAAAPTPAP 265

>ref|NP_004747.1| numb homolog (Drosophila)-like; numb (Drosophila) homolog-like
           [Homo sapiens] gi|14194976|sp|Q9Y6R0|NMBL_HUMAN
           Numb-like protein (Numb-R) gi|4102707|gb|AAD01549.1|
           NUMB-R protein [Homo sapiens]
          Length = 609

 Score = 31.6 bits (70), Expect = 4.3
 Identities = 25/76 (32%), Positives = 31/76 (39%), Gaps = 16/76 (21%)
 Frame = +1

Query: 277 FPPSHRWPLCGAT-QRRCANAVCGMS---------------YATGALPSRKCLCFGAAPR 408
           +PP  R P+ G T  +  ANA C  +               +   A+PS       A PR
Sbjct: 499 YPPMPRVPVVGITPSQMVANAFCSAAQLQPQPATLLGKAGAFPPPAIPSAPGS--QARPR 556

Query: 409 PKAAIRPPTRAPTPAP 456
           P  A  PP  AP PAP
Sbjct: 557 PNGAPWPPEPAPAPAP 572

EST assemble image

clone accession position 1 LCL053h05_r AV629188 1 489 2 LCL081g03_r AV630625 89 456 3 LCL082c04_r AV630659 99 365

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