KCC003236A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC003236A_C01 KCC003236A_c01
ctcagccgcatacaaactgtgcagccatcactgttgcataggagtttagggcctcgactt
gtcagctttggctcgttctgGCCGCACAGCAATTCTAGGTCTTGCTTGAATCTATTTTTA
TTGATTACGTGGCTTAAGAGGCCCTTGACGGTGGCAGGGCGTGCACACAAACTGGCCCTG
CGTTGGCGGACCTTATGCATTTGACGCTGCCACACGGCATAAGAAGCGCTAGCTTTCTCG
CATCCTCAGGCTTTCTGCGAGCGAGCGGCGGCACCGCGCTCTTGCTCAGCGACCTGCTCG
GCACGCAGCCGCAGGCCATCGCCATACGCAGCCAGGAGCTCCCGGTGGCCAGCACGAGCC
GACCGGAGGACAGCGCGCGCCTGGGGCCTTCTGTTGACGTCATACGCACATCGCTGCTCG
GCGTGGGCGCCCCGTTGGGCGGCCGGCTCCCGGCAGTGGCAATTAGCATGACCACCCTGC
GGCCTGCGCCGGCGATGCAGGGCGGCAAGAAACGGTCGCAGCAACAACAACAACAACAAC
AACAACAGCAGCCGCATCAGCAACCGGCTCAGGAGAAAGGCCACACTTCGCAGGAGCAAC
AGCAGCAGCATTATAGGATGGAGCACGGCGTCAGCCCCACCAGCTCGGAACTG
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003236A_C01 KCC003236A_c01
(653 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB05810.1| super cysteine rich protein; SCRP [Homo sapiens] 60 4e-08
pir||T13998 gene mastermind protein - fruit fly (Drosophila viri... 55 7e-07
ref|XP_328885.1| predicted protein [Neurospora crassa] gi|289210... 55 9e-07
ref|NP_523657.1| Hairy/E(spl)-related with YRPW motif CG11194-PA... 54 2e-06
ref|NP_726905.1| CG32778-PA [Drosophila melanogaster] gi|2283166... 54 2e-06
>gb|AAB05810.1| super cysteine rich protein; SCRP [Homo sapiens]
Length = 46
Score = 59.7 bits (143), Expect = 4e-08
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = -2
Query: 610 CCCCCSCEVWPFS*AGC*CGCCCCCCCCCCC 518
CCCCC C C C CCCCCCCCCCC
Sbjct: 11 CCCCCCC---------CCCCCCCCCCCCCCC 32
Score = 59.7 bits (143), Expect = 4e-08
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = -2
Query: 610 CCCCCSCEVWPFS*AGC*CGCCCCCCCCCCC 518
CCCCC C C C CCCCCCCCCCC
Sbjct: 12 CCCCCCC---------CCCCCCCCCCCCCCC 33
Score = 56.2 bits (134), Expect = 4e-07
Identities = 19/36 (52%), Positives = 19/36 (52%)
Frame = -2
Query: 625 CSIL*CCCCCSCEVWPFS*AGC*CGCCCCCCCCCCC 518
C CCCCC C C C CCCCCCC CCC
Sbjct: 11 CCCCCCCCCCCC---------CCCCCCCCCCCFCCC 37
Score = 50.1 bits (118), Expect = 3e-05
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2
Query: 592 CEVWPFS*AGC*CGCCCCCCCCCCC 518
CE+ P C C CCCCCCCCCCC
Sbjct: 2 CELCPDRSRCCCCCCCCCCCCCCCC 26
>pir||T13998 gene mastermind protein - fruit fly (Drosophila virilis)
gi|157834|gb|AAC37201.1| mastermind
Length = 1655
Score = 55.5 bits (132), Expect = 7e-07
Identities = 24/56 (42%), Positives = 35/56 (61%)
Frame = +3
Query: 459 AISMTTLRPAPAMQGGKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQHYRMEH 626
A++ T+++ P + GG+ R QQQQQ QQ QQ Q Q + H +QQQQH + +H
Sbjct: 345 ALTNTSVKSEPGVGGGRGRHQQQQQHQQHQQQQHQQQQHQQHQQHQQQQQHQQQQH 400
Score = 39.3 bits (90), Expect = 0.052
Identities = 17/31 (54%), Positives = 21/31 (66%)
Frame = +3
Query: 510 KRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQ 602
++ QQ QQQQ QQQ HQQ Q+ H Q+QQ
Sbjct: 390 QQQQQHQQQQHQQQQHQQQQQQHHHQQQQQQ 420
Score = 38.9 bits (89), Expect = 0.067
Identities = 22/50 (44%), Positives = 28/50 (56%)
Frame = +3
Query: 486 APAMQGGKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQHYRMEHGVS 635
A A Q +++ QQQQQQQQQQQ QQ A ++ QQ H + G S
Sbjct: 902 ANATQQQQQQQQQQQQQQQQQQQQQQQATTTTLQMKQTQQLHISQQGGGS 951
Score = 38.9 bits (89), Expect = 0.067
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +3
Query: 510 KRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQ 605
K QQQQ QQQQQ QQ Q++ H +Q+QQQ
Sbjct: 767 KHLQQQQAMQQQQQQQQQQQQQQQHHAQQQQQ 798
Score = 38.5 bits (88), Expect = 0.088
Identities = 18/37 (48%), Positives = 23/37 (61%)
Frame = +3
Query: 498 QGGKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQ 608
Q ++ QQQQ QQQQ Q Q Q++ H Q+QQQQ
Sbjct: 384 QQHQQHQQQQQHQQQQHQQQQHQQQQQQHHHQQQQQQ 420
Score = 38.1 bits (87), Expect = 0.11
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Frame = +3
Query: 441 GRLPAVAISMTTLRPAPAMQGGKKRSQQQQQQQQQQQP-----HQQPAQEKG----HTSQ 593
G LP + A A Q +++ QQQQQQQQQQQ HQQ Q++ H Q
Sbjct: 4 GGLPVFQSASQAAAAAVAQQQQQQQQQQQQQQQQQQQHLNLQLHQQHLQQQQSLGIHLQQ 63
Query: 594 EQQQQ 608
+QQ Q
Sbjct: 64 QQQLQ 68
Score = 37.4 bits (85), Expect = 0.20
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +3
Query: 516 SQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQHYRMEHGV 632
+QQQQQQQQQQQ QQ Q++ H + + QQH + + +
Sbjct: 21 AQQQQQQQQQQQQQQQ--QQQQHLNLQLHQQHLQQQQSL 57
Score = 37.0 bits (84), Expect = 0.26
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +3
Query: 507 KKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQ 602
K QQQ QQQQQQ QQ Q++ H Q+QQ
Sbjct: 767 KHLQQQQAMQQQQQQQQQQQQQQQHHAQQQQQ 798
Score = 36.6 bits (83), Expect = 0.33
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +3
Query: 492 AMQGGKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQ 608
A+ GG + QQQQQQQQQ QQ Q+ Q+QQQQ
Sbjct: 895 AVPGGNAANATQQQQQQQQQQQQQQQQQ-----QQQQQQ 928
Score = 35.4 bits (80), Expect = 0.75
Identities = 21/57 (36%), Positives = 30/57 (51%), Gaps = 13/57 (22%)
Frame = +3
Query: 477 LRPAPAMQGGKKRSQQQQQQQQQQQPHQQPAQE-------------KGHTSQEQQQQ 608
L+ Q +++ QQQQQQQQQQQ H Q Q+ G+ +++QQQQ
Sbjct: 766 LKHLQQQQAMQQQQQQQQQQQQQQQHHAQQQQQHPNGPNMGVPMGGAGNFAKQQQQQ 822
Score = 35.4 bits (80), Expect = 0.75
Identities = 21/40 (52%), Positives = 23/40 (57%)
Frame = +3
Query: 492 AMQGGKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQH 611
A Q G SQQQ QQQQQQ QQP + Q+QQQ H
Sbjct: 975 AAQQGVFFSQQQAAQQQQQQ-QQQPGNAGPNPQQQQQQPH 1013
Score = 35.0 bits (79), Expect = 0.97
Identities = 18/35 (51%), Positives = 20/35 (56%)
Frame = +3
Query: 504 GKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQ 608
G ++ Q QQQQQ QQ QQ Q G Q QQQQ
Sbjct: 662 GMQQQQPQQQQQAPQQQQQQHGQMMGGPGQGQQQQ 696
Score = 34.7 bits (78), Expect = 1.3
Identities = 21/45 (46%), Positives = 24/45 (52%)
Frame = +3
Query: 483 PAPAMQGGKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQHYR 617
P MQ + + QQQ QQQQQQ H Q G Q+QQQQ R
Sbjct: 659 PPHGMQQQQPQQQQQAPQQQQQQ-HGQMMGGPGQGQQQQQQQQPR 702
Score = 34.7 bits (78), Expect = 1.3
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +3
Query: 522 QQQQQQQQQQPHQQPAQEKGHTSQEQQQQH 611
QQQQ QQQQ QQ Q++ +QQQQH
Sbjct: 770 QQQQAMQQQQQQQQQQQQQQQHHAQQQQQH 799
Score = 34.3 bits (77), Expect = 1.7
Identities = 26/79 (32%), Positives = 37/79 (45%), Gaps = 21/79 (26%)
Frame = +3
Query: 477 LRPAPAMQGGKKRSQQQQQQQQ----QQQPH-----------------QQPAQEKGHTSQ 593
L+ AMQ +++ QQQQQQQQ QQQ H +Q Q+ Q
Sbjct: 769 LQQQQAMQQQQQQQQQQQQQQQHHAQQQQQHPNGPNMGVPMGGAGNFAKQQQQQVPTPQQ 828
Query: 594 EQQQQHYRMEHGVSPTSSE 650
+QQQQ + + SP S++
Sbjct: 829 QQQQQLQQQQQQYSPFSNQ 847
Score = 33.9 bits (76), Expect = 2.2
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Frame = +3
Query: 519 QQQQQQQQQQQPH------QQPAQEKGHTSQEQQQQHYRMEHGV 632
QQQQ Q QQQQ H QQ Q + Q QQQQ + +H +
Sbjct: 63 QQQQLQLQQQQQHNAQAQQQQQLQVQQQQQQRQQQQQQQQQHSL 106
Score = 33.9 bits (76), Expect = 2.2
Identities = 15/28 (53%), Positives = 20/28 (70%)
Frame = +3
Query: 498 QGGKKRSQQQQQQQQQQQPHQQPAQEKG 581
Q +++ QQQQ QQQQQQ H Q Q++G
Sbjct: 394 QHQQQQHQQQQHQQQQQQHHHQQQQQQG 421
Score = 33.1 bits (74), Expect = 3.7
Identities = 15/35 (42%), Positives = 21/35 (59%)
Frame = +3
Query: 507 KKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQH 611
+++ Q Q QQQQQ Q Q++ Q+QQQQH
Sbjct: 70 QQQQQHNAQAQQQQQLQVQQQQQQRQQQQQQQQQH 104
Score = 33.1 bits (74), Expect = 3.7
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 19/65 (29%)
Frame = +3
Query: 504 GKKRSQQQQQQQQQQQPH-------------------QQPAQEKGHTSQEQQQQHYRMEH 626
G QQQQQ QQQQQP QQ Q++ Q+QQQQ + +
Sbjct: 869 GNMPQQQQQQPQQQQQPPRGPQSNPNAVPGGNAANATQQQQQQQQQQQQQQQQQQQQQQQ 928
Query: 627 GVSPT 641
+ T
Sbjct: 929 ATTTT 933
Score = 32.3 bits (72), Expect = 6.3
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 507 KKRSQQQQQQQQQQQPHQQPAQEKG 581
++ QQQ QQQQQQ HQQ Q+ G
Sbjct: 398 QQHQQQQHQQQQQQHHHQQQQQQGG 422
Score = 32.3 bits (72), Expect = 6.3
Identities = 16/37 (43%), Positives = 23/37 (61%)
Frame = +3
Query: 513 RSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQHYRME 623
+ QQQ Q QQQQQ + Q Q++ Q+QQQQ + +
Sbjct: 62 QQQQQLQLQQQQQHNAQAQQQQQLQVQQQQQQRQQQQ 98
Score = 32.0 bits (71), Expect = 8.2
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 10/58 (17%)
Frame = +3
Query: 498 QGGKKRSQQQQQ--------QQQQQQPH--QQPAQEKGHTSQEQQQQHYRMEHGVSPT 641
Q +++ QQQQQ QQQQQQPH A G +QQQ + M + P+
Sbjct: 986 QAAQQQQQQQQQPGNAGPNPQQQQQQPHGGNAGANGGGPNGPQQQQPNQNMNNSNVPS 1043
>ref|XP_328885.1| predicted protein [Neurospora crassa] gi|28921014|gb|EAA30336.1|
predicted protein [Neurospora crassa]
Length = 879
Score = 55.1 bits (131), Expect = 9e-07
Identities = 29/62 (46%), Positives = 37/62 (58%)
Frame = +3
Query: 432 PLGGRLPAVAISMTTLRPAPAMQGGKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQH 611
PL +L AV + P P Q G+++ QQQQQQQQQQQ QQ Q++ Q+QQQQ
Sbjct: 226 PLFQKLAAVPTTQPMTLPQPHHQPGQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 285
Query: 612 YR 617
R
Sbjct: 286 TR 287
>ref|NP_523657.1| Hairy/E(spl)-related with YRPW motif CG11194-PA [Drosophila
melanogaster] gi|5678825|gb|AAD46771.1|AF151523_1 hairy
and enhancer of split related protein 1 [Drosophila
melanogaster] gi|21627753|gb|AAF59152.2| CG11194-PA
[Drosophila melanogaster]
Length = 425
Score = 54.3 bits (129), Expect = 2e-06
Identities = 35/95 (36%), Positives = 48/95 (49%)
Frame = +3
Query: 342 PVASTSRPEDSARLGPSVDVIRTSLLGVGAPLGGRLPAVAISMTTLRPAPAMQGGKKRSQ 521
P S S + + +LG V RTS G+ + LP+ + + + Q +++ Q
Sbjct: 266 PTLSASPSQQAQQLGGRTSVSRTS----GSAVTESLPSHDLHSDS----SSQQQQQQQQQ 317
Query: 522 QQQQQQQQQQPHQQPAQEKGHTSQEQQQQHYRMEH 626
QQQQQQ QQQ HQQ Q T Q QQQHY +H
Sbjct: 318 QQQQQQHQQQQHQQQQQRTQTTPQPTQQQHYTHDH 352
Score = 37.4 bits (85), Expect = 0.20
Identities = 34/128 (26%), Positives = 46/128 (35%)
Frame = +3
Query: 267 GGTALLLSDLLGTQPQAIAIRSQELPVASTSRPEDSARLGPSVDVIRTSLLGVGAPLGGR 446
GG + G QP A P S + P + S + S LGGR
Sbjct: 228 GGWSPAAPSSSGYQPNCAAA-----PYQSYAAPANPGAYVSSYPTLSASPSQQAQQLGGR 282
Query: 447 LPAVAISMTTLRPAPAMQGGKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQHYRMEH 626
S + + + S QQQQQQ QQ Q++ H Q+ QQQ R +
Sbjct: 283 TSVSRTSGSAVTESLPSHDLHSDSSSQQQQQQ----QQQQQQQQQHQQQQHQQQQQRTQT 338
Query: 627 GVSPTSSE 650
PT +
Sbjct: 339 TPQPTQQQ 346
>ref|NP_726905.1| CG32778-PA [Drosophila melanogaster] gi|22831660|gb|AAF45913.2|
CG32778-PA [Drosophila melanogaster]
Length = 942
Score = 53.9 bits (128), Expect = 2e-06
Identities = 26/64 (40%), Positives = 37/64 (57%)
Frame = +3
Query: 456 VAISMTTLRPAPAMQGGKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQHYRMEHGVS 635
+++ M + A A + + QQQQQQQQQQQ HQQ Q++ Q+QQQQH + +
Sbjct: 475 LSVKMAAAQAAAAAAAYQNQQQQQQQQQQQQQHHQQQQQQQQQQQQQQQQQHGKQSSSPA 534
Query: 636 PTSS 647
P S
Sbjct: 535 PNVS 538
Score = 44.3 bits (103), Expect = 0.002
Identities = 23/70 (32%), Positives = 35/70 (49%)
Frame = +3
Query: 435 LGGRLPAVAISMTTLRPAPAMQGGKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQHY 614
+G P + +++ A A + Q QQQQQQQQ QQ ++ Q+QQQQ
Sbjct: 463 MGPLPPGFSAINLSVKMAAAQAAAAAAAYQNQQQQQQQQQQQQQHHQQQQQQQQQQQQQQ 522
Query: 615 RMEHGVSPTS 644
+ +HG +S
Sbjct: 523 QQQHGKQSSS 532
Score = 39.3 bits (90), Expect = 0.052
Identities = 17/32 (53%), Positives = 24/32 (74%)
Frame = +3
Query: 507 KKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQ 602
+++ QQQQQQQQQQQ QQ Q++ HT +Q+
Sbjct: 227 QQQQQQQQQQQQQQQQQQQQQQQQQHTLHQQR 258
Score = 38.5 bits (88), Expect = 0.088
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +3
Query: 519 QQQQQQQQQQQPHQQPAQEKGHTSQEQQQQH 611
QQQQQQQQQQQ QQ Q+ Q+QQQQH
Sbjct: 227 QQQQQQQQQQQQQQQQQQQ-----QQQQQQH 252
Score = 33.5 bits (75), Expect = 2.8
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = +3
Query: 483 PAPAMQGGKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQHYRMEHGVSPTSSEL 653
P P+ + QQQQQQQQQQQ ++ Q+ +Q Y H S EL
Sbjct: 268 PDPSANYHSEHQQQQQQQQQQQQADER--------QQQYEQMRYAQSHVSVGPSGEL 316
Score = 33.1 bits (74), Expect = 3.7
Identities = 19/57 (33%), Positives = 28/57 (48%), Gaps = 15/57 (26%)
Frame = +3
Query: 498 QGGKKRSQQQQQQQQQQQPHQQPAQEKG---------------HTSQEQQQQHYRME 623
Q +++ QQQQQQQQQQQ Q++G H+ +QQQQ + +
Sbjct: 232 QQQQQQQQQQQQQQQQQQQQHTLHQQRGPFIEGNDVPDPSANYHSEHQQQQQQQQQQ 288
Score = 33.1 bits (74), Expect = 3.7
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 531 QQQQQQQPHQQPAQEKGHTSQEQQQQHYRMEHG 629
QQQQQQQ QQ Q++ Q+QQQ + G
Sbjct: 227 QQQQQQQQQQQQQQQQQQQQQQQQQHTLHQQRG 259
Score = 32.0 bits (71), Expect = 8.2
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +3
Query: 411 SLLGVGAPLGGRLPAVAISMTTLRPAPAMQGGKKRSQQQQQQQQQQQPHQQPAQEKGHTS 590
S + + + A A + + Q +++ QQQQQQQQQ QQ Q+ G S
Sbjct: 471 SAINLSVKMAAAQAAAAAAAYQNQQQQQQQQQQQQQHHQQQQQQQQQQQQQQQQQHGKQS 530
EST assemble image
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clone |
accession |
position |
| 1 |
MXL061h12_r |
BP096623 |
1 |
371 |
| 2 |
LCL051f11_r |
AV629081 |
143 |
653 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute