Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003233A_C01 KCC003233A_c01
(524 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK07422.1| retinal homeobox transcription factor Rx/rax [Rat... 35 0.45
gb|AAL30158.1| Rx/rax homeoprotein [Mus musculus] gi|16901486|gb... 35 0.45
gb|AAC53129.1| paired-type homeobox gene [Mus musculus] gi|19354... 35 0.45
ref|NP_446130.1| retina and anterior neural fold homeobox [Rattu... 35 0.45
ref|NP_524896.2| Abdominal B CG11648-PB [Drosophila melanogaster... 35 0.58
>gb|AAK07422.1| retinal homeobox transcription factor Rx/rax [Rattus norvegicus]
Length = 333
Score = 35.4 bits (80), Expect = 0.45
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 52 HSSPPPTLDVKPFHPS-EILKLPATHSRAPASFGNKFNQAERYPRAAGLAFL 204
++ PPP L+ P P + L P + APA FG+KF+ E YPR + +A L
Sbjct: 265 YTPPPPFLNSAPLGPGLQQLGPPPAYPCAPA-FGDKFSLEEAYPRNSSIAAL 315
>gb|AAL30158.1| Rx/rax homeoprotein [Mus musculus] gi|16901486|gb|AAL30161.1|
Rx/rax homeoprotein [Mus musculus]
Length = 161
Score = 35.4 bits (80), Expect = 0.45
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 52 HSSPPPTLDVKPFHPS-EILKLPATHSRAPASFGNKFNQAERYPRAAGLAFL 204
++ PPP L+ P P + L P + APA FG+KF+ E YPR + +A L
Sbjct: 93 YTPPPPFLNSAPLGPGLQQLGPPPAYPCAPA-FGDKFSLEEAYPRNSSIAAL 143
>gb|AAC53129.1| paired-type homeobox gene [Mus musculus] gi|19354403|gb|AAH24731.1|
Retina and anterior neural fold homeobox [Mus musculus]
gi|37589415|gb|AAH58757.1| Unknown (protein for
MGC:68025) [Mus musculus]
Length = 342
Score = 35.4 bits (80), Expect = 0.45
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 52 HSSPPPTLDVKPFHPS-EILKLPATHSRAPASFGNKFNQAERYPRAAGLAFL 204
++ PPP L+ P P + L P + APA FG+KF+ E YPR + +A L
Sbjct: 274 YTPPPPFLNSAPLGPGLQQLGPPPAYPCAPA-FGDKFSLEEAYPRNSSIAAL 324
>ref|NP_446130.1| retina and anterior neural fold homeobox [Rattus norvegicus]
gi|18203127|sp|Q9JLT7|RX_RAT Retinal homeobox protein Rx
(Retina and anterior neural fold homeobox protein)
gi|7384990|gb|AAF61631.1|AF135839_1 homeodomain protein
RX [Rattus norvegicus] gi|12746272|gb|AAK07423.1|
retinal homeobox transcription factor Rx/rax [Rattus
norvegicus]
Length = 342
Score = 35.4 bits (80), Expect = 0.45
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 52 HSSPPPTLDVKPFHPS-EILKLPATHSRAPASFGNKFNQAERYPRAAGLAFL 204
++ PPP L+ P P + L P + APA FG+KF+ E YPR + +A L
Sbjct: 274 YTPPPPFLNSAPLGPGLQQLGPPPAYPCAPA-FGDKFSLEEAYPRNSSIAAL 324
>ref|NP_524896.2| Abdominal B CG11648-PB [Drosophila melanogaster]
gi|1708231|sp|P09087|HMAB_DROME Homeobox protein
abdominal-B (P3) (Infraabdominal 7) (IAB-7) (PH189)
gi|969080|gb|AAA84402.1| ABD-BI
gi|7300197|gb|AAF55362.1| CG11648-PB [Drosophila
melanogaster]
Length = 493
Score = 35.0 bits (79), Expect = 0.58
Identities = 20/67 (29%), Positives = 36/67 (52%)
Frame = +2
Query: 17 LRRLHA*LTLHTTHHHHPR*TLSLSIRPKSSSYLQPTRELQRHLAISSTKPSDILERQGW 196
L++LH H HHH P+ + S + +LQ ++ Q+H ++S+ PS +L++Q
Sbjct: 28 LQQLH-----HHAHHHLPQPLHTTSHHHSAHPHLQQQQQQQQHAVVASS-PSSVLQQQQQ 81
Query: 197 RSLQVEH 217
+S H
Sbjct: 82 QSTPTTH 88
