Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003229A_C01 KCC003229A_c01
(469 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T07796 DNA-directed RNA polymerase (EC 2.7.7.6) largest cha... 248 3e-65
pir||S14181 DNA-directed RNA polymerase (EC 2.7.7.6) largest cha... 248 3e-65
emb|CAA36735.1| DNA-directed RNA polymerase [Arabidopsis thaliana] 246 7e-65
pir||JDMU1 DNA-directed RNA polymerase (EC 2.7.7.6) II largest c... 246 7e-65
ref|NP_195305.1| DNA-directed RNA polymerase (EC 2.7.7.6) II lar... 246 7e-65
>pir||T07796 DNA-directed RNA polymerase (EC 2.7.7.6) largest chain - soybean
(fragment) gi|18732|emb|CAA36733.1| DNA-directed RNA
polymerase [Glycine max]
Length = 625
Score = 248 bits (632), Expect = 3e-65
Identities = 124/173 (71%), Positives = 138/173 (79%), Gaps = 19/173 (10%)
Frame = +3
Query: 6 GPMSPSHLLSP----------MHSPFVGS---------GFSPMHPGAFSPAHGGGVGGPM 128
G MSPS+LLSP SP+VG G+SP PG +SP+ G P
Sbjct: 331 GLMSPSYLLSPNLRLSPTTDAQFSPYVGGMAFSPTSSPGYSPSSPG-YSPSSPGY--SPT 387
Query: 129 SPGYSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 308
SPGYSPTSPGYSPTSP YSP+SP YSPTSPAYSPTSP+YSPTSP+YSPTSP+YSPTSP+Y
Sbjct: 388 SPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 447
Query: 309 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 467
SPTSP+YSPTSPAYSPTSPAYSPTSPAYSPTSP+YSPTSP+YSPTSP+YSPTS
Sbjct: 448 SPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTS 500
Score = 236 bits (601), Expect = 1e-61
Identities = 116/154 (75%), Positives = 128/154 (82%), Gaps = 1/154 (0%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SP + SP +SP G+SP P A+SP P SP YSPTSP YSPTSP YS
Sbjct: 393 PTSPGYSPTSPTYSPS-SPGYSPTSP-AYSPTSPSY--SPTSPSYSPTSPSYSPTSPSYS 448
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 365
PTSP+YSPTSPAYSPTSPAYSPTSPAYSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSP
Sbjct: 449 PTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 508
Query: 366 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 467
+YSPTSPAYSPTSP YSPTSP+YSPTSP+YSPTS
Sbjct: 509 SYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTS 542
Score = 221 bits (564), Expect = 2e-57
Identities = 108/153 (70%), Positives = 123/153 (79%), Gaps = 1/153 (0%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SP + SP +SP +SP P ++SP P SP YSPTSP YSPTSP YS
Sbjct: 407 PSSPGYSPTSPAYSP-TSPSYSPTSP-SYSPTSPSY--SPTSPSYSPTSPSYSPTSPAYS 462
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 365
PTSPAYSPTSPAYSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSPAYSPTSP
Sbjct: 463 PTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 522
Query: 366 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 464
YSPTSP+YSPTSP+YSPTSP+Y+P S YSP+
Sbjct: 523 GYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPS 555
Score = 214 bits (545), Expect = 4e-55
Identities = 111/180 (61%), Positives = 127/180 (69%), Gaps = 27/180 (15%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SPS+ SP +SP +SP P ++SP P SP YSPTSP YSPTSP YS
Sbjct: 421 PTSPSYSPTSPSYSP-TSPSYSPTSP-SYSPTSPSY--SPTSPAYSPTSPAYSPTSPAYS 476
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 365
PTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSPAYSPTSP YSPTSP+YSPTSP
Sbjct: 477 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSP 536
Query: 366 AYSPTSPAY--------------------------SPTSPAYSPTSPAYSPTSPAYSPTS 467
+YSPTSP+Y SPTSP YSPTSP+YSPTSP+YSP+S
Sbjct: 537 SYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSS 596
Score = 211 bits (537), Expect = 3e-54
Identities = 110/181 (60%), Positives = 125/181 (68%), Gaps = 29/181 (16%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPG--AFSPAHGGGVGGPMSPGYSPTSPGYSPTSPR 179
P SPS+ SP +SP +SP P SPA+ P SP YSPTSP YSPTSP
Sbjct: 428 PTSPSYSPTSPSYSP-TSPSYSPTSPSYSPTSPAYS-----PTSPAYSPTSPAYSPTSPS 481
Query: 180 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 359
YSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSPAYSPTSP YSPTSP+YSPTSP+YSPT
Sbjct: 482 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPT 541
Query: 360 SPAY--------------------------SPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 461
SP+Y SPTSP YSPTSP+YSPTSP+YSP+SP YSP
Sbjct: 542 SPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP 601
Query: 462 T 464
+
Sbjct: 602 S 602
Score = 50.1 bits (118), Expect = 1e-05
Identities = 29/116 (25%), Positives = 32/116 (27%), Gaps = 3/116 (2%)
Frame = +2
Query: 131 ARLQPHVAGLQ---PHQPALQPHQPGVQPDEPGLQPHITGLQPDLAGLQPDESGIQPDES 301
A+ P+V G+ P P PG P PG P G P G P P
Sbjct: 351 AQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSP 410
Query: 302 GLLANVPGLQPHVTGIQPDEPGIQPD*PGIFADQPGIQPNVAGVQPDVAGLQPD*P 469
G P P P P P P P P P P P
Sbjct: 411 GYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 466
Score = 48.1 bits (113), Expect = 5e-05
Identities = 26/105 (24%), Positives = 26/105 (24%)
Frame = +2
Query: 155 GLQPHQPALQPHQPGVQPDEPGLQPHITGLQPDLAGLQPDESGIQPDESGLLANVPGLQP 334
G P P P PG P PG P G P P G P P P
Sbjct: 369 GYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 428
Query: 335 HVTGIQPDEPGIQPD*PGIFADQPGIQPNVAGVQPDVAGLQPD*P 469
P P P P P P P P P
Sbjct: 429 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSP 473
Score = 46.6 bits (109), Expect = 1e-04
Identities = 26/109 (23%), Positives = 26/109 (23%)
Frame = +2
Query: 143 PHVAGLQPHQPALQPHQPGVQPDEPGLQPHITGLQPDLAGLQPDESGIQPDESGLLANVP 322
P G P P P PG P PG P P G P P P
Sbjct: 372 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 431
Query: 323 GLQPHVTGIQPDEPGIQPD*PGIFADQPGIQPNVAGVQPDVAGLQPD*P 469
P P P P P P P P P P
Sbjct: 432 SYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSP 480
Score = 37.7 bits (86), Expect = 0.066
Identities = 29/103 (28%), Positives = 41/103 (39%)
Frame = -2
Query: 459 GCKPATSGCTPATLGCMPGWSANMPG*SGCMPGSSGCMPVTWGCRPGTLASRPDSSGCMP 280
G P++ G +P++ PG+S PG S PG S P PG + P S P
Sbjct: 369 GYSPSSPGYSPSS----PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 424
Query: 279 DSSGCRPARSGCRPVMWGCRPGSSGCTPGWWGCNAGWWGCSPA 151
S P+ S P P S +P + + + SPA
Sbjct: 425 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPA 467
Score = 32.7 bits (73), Expect = 2.1
Identities = 25/86 (29%), Positives = 33/86 (38%)
Frame = -2
Query: 408 PGWSANMPG*SGCMPGSSGCMPVTWGCRPGTLASRPDSSGCMPDSSGCRPARSGCRPVMW 229
PG+S + PG S PG S P PG + P S P S PA S P
Sbjct: 368 PGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYS 427
Query: 228 GCRPGSSGCTPGWWGCNAGWWGCSPA 151
P S +P + + + SP+
Sbjct: 428 PTSPSYSPTSPSYSPTSPSYSPTSPS 453
Score = 32.3 bits (72), Expect = 2.8
Identities = 27/106 (25%), Positives = 39/106 (36%), Gaps = 3/106 (2%)
Frame = -2
Query: 459 GCKPATSGCTPATLG---CMPGWSANMPG*SGCMPGSSGCMPVTWGCRPGTLASRPDSSG 289
G P++ G +P + G PG+S P S PG S P P + P S
Sbjct: 376 GYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSP 435
Query: 288 CMPDSSGCRPARSGCRPVMWGCRPGSSGCTPGWWGCNAGWWGCSPA 151
P S P+ S P P S +P + + + SP+
Sbjct: 436 TSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPS 481
>pir||S14181 DNA-directed RNA polymerase (EC 2.7.7.6) largest chain (isoform
B1) - soybean (fragment)
Length = 650
Score = 248 bits (632), Expect = 3e-65
Identities = 124/173 (71%), Positives = 138/173 (79%), Gaps = 19/173 (10%)
Frame = +3
Query: 6 GPMSPSHLLSP----------MHSPFVGS---------GFSPMHPGAFSPAHGGGVGGPM 128
G MSPS+LLSP SP+VG G+SP PG +SP+ G P
Sbjct: 327 GLMSPSYLLSPNLRLSPTTDAQFSPYVGGMAFSPTSSPGYSPSSPG-YSPSSPGY--SPT 383
Query: 129 SPGYSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 308
SPGYSPTSPGYSPTSP YSP+SP YSPTSPAYSPTSP+YSPTSP+YSPTSP+YSPTSP+Y
Sbjct: 384 SPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 443
Query: 309 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 467
SPTSP+YSPTSPAYSPTSPAYSPTSPAYSPTSP+YSPTSP+YSPTSP+YSPTS
Sbjct: 444 SPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTS 496
Score = 236 bits (601), Expect = 1e-61
Identities = 116/154 (75%), Positives = 128/154 (82%), Gaps = 1/154 (0%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SP + SP +SP G+SP P A+SP P SP YSPTSP YSPTSP YS
Sbjct: 389 PTSPGYSPTSPTYSPS-SPGYSPTSP-AYSPTSPSY--SPTSPSYSPTSPSYSPTSPSYS 444
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 365
PTSP+YSPTSPAYSPTSPAYSPTSPAYSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSP
Sbjct: 445 PTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 504
Query: 366 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 467
+YSPTSPAYSPTSP YSPTSP+YSPTSP+YSPTS
Sbjct: 505 SYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTS 538
Score = 221 bits (564), Expect = 2e-57
Identities = 108/153 (70%), Positives = 123/153 (79%), Gaps = 1/153 (0%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SP + SP +SP +SP P ++SP P SP YSPTSP YSPTSP YS
Sbjct: 403 PSSPGYSPTSPAYSP-TSPSYSPTSP-SYSPTSPSY--SPTSPSYSPTSPSYSPTSPAYS 458
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 365
PTSPAYSPTSPAYSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSPAYSPTSP
Sbjct: 459 PTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 518
Query: 366 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 464
YSPTSP+YSPTSP+YSPTSP+Y+P S YSP+
Sbjct: 519 GYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPS 551
Score = 201 bits (511), Expect = 3e-51
Identities = 110/187 (58%), Positives = 126/187 (66%), Gaps = 34/187 (18%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SPS+ SP +SP +SP P ++SP P SP YSPTSP YSPTSP YS
Sbjct: 417 PTSPSYSPTSPSYSP-TSPSYSPTSP-SYSPTSPSY--SPTSPAYSPTSPAYSPTSPAYS 472
Query: 186 PTSP-------AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 344
PTSP +YSPTSP+YSPTSP+YSPTSP+YSPTSPAYSPTSP YSPTSP+YSPTSP
Sbjct: 473 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSP 532
Query: 345 AYSPTSPA--------------------------YSPTSPAYSPTSPAYSPTSPAYSPTS 446
+YSPTSP+ YSPTSP YSPTSP+YSPTSP+YSP+S
Sbjct: 533 SYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSS 592
Query: 447 PAYSPTS 467
P YSP+S
Sbjct: 593 PTYSPSS 599
Score = 187 bits (475), Expect = 5e-47
Identities = 104/193 (53%), Positives = 119/193 (60%), Gaps = 40/193 (20%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SPS+ SP +SP +SP P A+SP P SP YSPTSP YSPTSP YS
Sbjct: 445 PTSPSYSPTSPAYSP-TSPAYSPTSP-AYSPTSPSY--SPTSPSYSPTSPSYSPTSPSYS 500
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY------------------- 308
PTSP+YSPTSPAYSPTSP YSPTSP+YSPTSP+YSPTSP+Y
Sbjct: 501 PTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPR 560
Query: 309 --------------SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP------ 428
SPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 561 LSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 620
Query: 429 AYSPTSPAYSPTS 467
YSP+ P YSP+S
Sbjct: 621 GYSPSQPGYSPSS 633
Score = 119 bits (297), Expect = 2e-26
Identities = 72/151 (47%), Positives = 86/151 (56%), Gaps = 28/151 (18%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGY-------- 161
P SPS+ SP +SP +SP PG +SP P SP YSPTSP Y
Sbjct: 494 PTSPSYSPTSPSYSP-TSPAYSPTSPG-YSPTSPSY--SPTSPSYSPTSPSYNPQSAKYS 549
Query: 162 ------------------SPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 287
SPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 550 PSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDY 609
Query: 288 SPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 377
SP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 610 SPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 639
Score = 50.1 bits (118), Expect = 1e-05
Identities = 29/116 (25%), Positives = 32/116 (27%), Gaps = 3/116 (2%)
Frame = +2
Query: 131 ARLQPHVAGLQ---PHQPALQPHQPGVQPDEPGLQPHITGLQPDLAGLQPDESGIQPDES 301
A+ P+V G+ P P PG P PG P G P G P P
Sbjct: 347 AQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSP 406
Query: 302 GLLANVPGLQPHVTGIQPDEPGIQPD*PGIFADQPGIQPNVAGVQPDVAGLQPD*P 469
G P P P P P P P P P P P
Sbjct: 407 GYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 462
Score = 48.1 bits (113), Expect = 5e-05
Identities = 26/105 (24%), Positives = 26/105 (24%)
Frame = +2
Query: 155 GLQPHQPALQPHQPGVQPDEPGLQPHITGLQPDLAGLQPDESGIQPDESGLLANVPGLQP 334
G P P P PG P PG P G P P G P P P
Sbjct: 365 GYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 424
Query: 335 HVTGIQPDEPGIQPD*PGIFADQPGIQPNVAGVQPDVAGLQPD*P 469
P P P P P P P P P
Sbjct: 425 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSP 469
Score = 46.6 bits (109), Expect = 1e-04
Identities = 26/109 (23%), Positives = 26/109 (23%)
Frame = +2
Query: 143 PHVAGLQPHQPALQPHQPGVQPDEPGLQPHITGLQPDLAGLQPDESGIQPDESGLLANVP 322
P G P P P PG P PG P P G P P P
Sbjct: 368 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 427
Query: 323 GLQPHVTGIQPDEPGIQPD*PGIFADQPGIQPNVAGVQPDVAGLQPD*P 469
P P P P P P P P P P
Sbjct: 428 SYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSP 476
Score = 37.7 bits (86), Expect = 0.066
Identities = 29/103 (28%), Positives = 41/103 (39%)
Frame = -2
Query: 459 GCKPATSGCTPATLGCMPGWSANMPG*SGCMPGSSGCMPVTWGCRPGTLASRPDSSGCMP 280
G P++ G +P++ PG+S PG S PG S P PG + P S P
Sbjct: 365 GYSPSSPGYSPSS----PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 420
Query: 279 DSSGCRPARSGCRPVMWGCRPGSSGCTPGWWGCNAGWWGCSPA 151
S P+ S P P S +P + + + SPA
Sbjct: 421 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPA 463
Score = 32.7 bits (73), Expect = 2.1
Identities = 25/86 (29%), Positives = 33/86 (38%)
Frame = -2
Query: 408 PGWSANMPG*SGCMPGSSGCMPVTWGCRPGTLASRPDSSGCMPDSSGCRPARSGCRPVMW 229
PG+S + PG S PG S P PG + P S P S PA S P
Sbjct: 364 PGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYS 423
Query: 228 GCRPGSSGCTPGWWGCNAGWWGCSPA 151
P S +P + + + SP+
Sbjct: 424 PTSPSYSPTSPSYSPTSPSYSPTSPS 449
Score = 32.3 bits (72), Expect = 2.8
Identities = 27/106 (25%), Positives = 39/106 (36%), Gaps = 3/106 (2%)
Frame = -2
Query: 459 GCKPATSGCTPATLG---CMPGWSANMPG*SGCMPGSSGCMPVTWGCRPGTLASRPDSSG 289
G P++ G +P + G PG+S P S PG S P P + P S
Sbjct: 372 GYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSP 431
Query: 288 CMPDSSGCRPARSGCRPVMWGCRPGSSGCTPGWWGCNAGWWGCSPA 151
P S P+ S P P S +P + + + SP+
Sbjct: 432 TSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPS 477
>emb|CAA36735.1| DNA-directed RNA polymerase [Arabidopsis thaliana]
Length = 1860
Score = 246 bits (629), Expect = 7e-65
Identities = 123/173 (71%), Positives = 137/173 (79%), Gaps = 19/173 (10%)
Frame = +3
Query: 6 GPMSPSHLLSP----------MHSPFVGS---------GFSPMHPGAFSPAHGGGVGGPM 128
G MSP++LLSP SP+VG G+SP PG +SP G P
Sbjct: 1526 GMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG-YSPTSPGY--SPT 1582
Query: 129 SPGYSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 308
SPGYSPTSPGYSPTSP YSP+SP YSPTSPAYSPTSP+YSPTSP+YSPTSP+YSPTSP+Y
Sbjct: 1583 SPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1642
Query: 309 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 467
SPTSP+YSPTSP+YSPTSPAYSPTSPAYSPTSPAYSPTSP+YSPTSP+YSPTS
Sbjct: 1643 SPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1695
Score = 238 bits (608), Expect = 2e-62
Identities = 116/154 (75%), Positives = 130/154 (84%), Gaps = 1/154 (0%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SP + SP +SP G+SP PG +SP P SPGYSPTSP YSPTSP YS
Sbjct: 1567 PSSPGYSPTSPGYSP-TSPGYSPTSPG-YSPT--SPTYSPSSPGYSPTSPAYSPTSPSYS 1622
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 365
PTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSPAYSPTSPAYSPTSPAYSPTSP
Sbjct: 1623 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSP 1682
Query: 366 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 467
+YSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTS
Sbjct: 1683 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1716
Score = 236 bits (601), Expect = 1e-61
Identities = 116/154 (75%), Positives = 128/154 (82%), Gaps = 1/154 (0%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SP + SP +SP G+SP P A+SP P SP YSPTSP YSPTSP YS
Sbjct: 1588 PTSPGYSPTSPTYSPS-SPGYSPTSP-AYSPTSPSY--SPTSPSYSPTSPSYSPTSPSYS 1643
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 365
PTSP+YSPTSP+YSPTSPAYSPTSPAYSPTSPAYSPTSP+YSPTSP+YSPTSP+YSPTSP
Sbjct: 1644 PTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSP 1703
Query: 366 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 467
+YSPTSP+YSPTSPAYSPTSP YSPTSP+YSPTS
Sbjct: 1704 SYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTS 1737
Score = 231 bits (588), Expect = 4e-60
Identities = 113/154 (73%), Positives = 127/154 (82%), Gaps = 1/154 (0%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SP++ SP +SP +SP P ++SP P SP YSPTSP YSPTSP YS
Sbjct: 1595 PTSPTYSPSSPGYSP-TSPAYSPTSP-SYSPTSPS--YSPTSPSYSPTSPSYSPTSPSYS 1650
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 365
PTSP+YSPTSPAYSPTSPAYSPTSPAYSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSP
Sbjct: 1651 PTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1710
Query: 366 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 467
+YSPTSPAYSPTSP YSPTSP+YSPTSP+Y PTS
Sbjct: 1711 SYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTS 1744
Score = 228 bits (581), Expect = 3e-59
Identities = 111/154 (72%), Positives = 125/154 (81%), Gaps = 1/154 (0%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SP + SP +SP +SP P ++SP P SP YSPTSP YSPTSP YS
Sbjct: 1602 PSSPGYSPTSPAYSP-TSPSYSPTSP-SYSPTSPSY--SPTSPSYSPTSPSYSPTSPSYS 1657
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 365
PTSPAYSPTSPAYSPTSPAYSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSP
Sbjct: 1658 PTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1717
Query: 366 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 467
AYSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S
Sbjct: 1718 AYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQS 1751
Score = 220 bits (561), Expect = 6e-57
Identities = 107/153 (69%), Positives = 123/153 (79%), Gaps = 1/153 (0%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SP++ SP +SP +SP P ++SP P SP YSPTSP YSPTSP YS
Sbjct: 1609 PTSPAYSPTSPSYSP-TSPSYSPTSP-SYSPTSPSY--SPTSPSYSPTSPSYSPTSPAYS 1664
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 365
PTSPAYSPTSPAYSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSPAYSPTSP
Sbjct: 1665 PTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 1724
Query: 366 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 464
YSPTSP+YSPTSP+Y PTSP+Y+P S YSP+
Sbjct: 1725 GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPS 1757
Score = 185 bits (470), Expect = 2e-46
Identities = 104/187 (55%), Positives = 116/187 (61%), Gaps = 34/187 (18%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SPS+ SP +SP +SP P A+SP P SP YSPTSP YSPTSP YS
Sbjct: 1651 PTSPSYSPTSPAYSP-TSPAYSPTSP-AYSPTSPSY--SPTSPSYSPTSPSYSPTSPSYS 1706
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY-------------------------- 287
PTSP+YSPTSPAYSPTSP YSPTSP+YSPTSP+Y
Sbjct: 1707 PTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNAR 1766
Query: 288 -------SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 446
SPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT
Sbjct: 1767 LSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 1825
Query: 447 PAYSPTS 467
P YSP+S
Sbjct: 1826 PGYSPSS 1832
Score = 108 bits (270), Expect = 3e-23
Identities = 70/151 (46%), Positives = 80/151 (52%), Gaps = 35/151 (23%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGY-------- 161
P SPS+ SP +SP +SP P A+SP G P SP YSPTSP Y
Sbjct: 1693 PTSPSYSPTSPSYSP-TSPSYSPTSP-AYSPTSPGY--SPTSPSYSPTSPSYGPTSPSYN 1748
Query: 162 -------------------------SPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 266
SPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP
Sbjct: 1749 PQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 1808
Query: 267 SPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 356
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1809 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 1838
Score = 47.8 bits (112), Expect = 6e-05
Identities = 26/105 (24%), Positives = 26/105 (24%)
Frame = +2
Query: 155 GLQPHQPALQPHQPGVQPDEPGLQPHITGLQPDLAGLQPDESGIQPDESGLLANVPGLQP 334
G P P P PG P PG P G P P G P P P
Sbjct: 1564 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 1623
Query: 335 HVTGIQPDEPGIQPD*PGIFADQPGIQPNVAGVQPDVAGLQPD*P 469
P P P P P P P P P
Sbjct: 1624 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 1668
Score = 47.4 bits (111), Expect = 8e-05
Identities = 34/145 (23%), Positives = 36/145 (24%), Gaps = 1/145 (0%)
Frame = +2
Query: 38 NALALRGQRLQPHAPRCFQPGARRRRGRPHVAR-LQPHVAGLQPHQPALQPHQPGVQPDE 214
N L RL P + F P P + P G P P P PG P
Sbjct: 1531 NYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTS 1590
Query: 215 PGLQPHITGLQPDLAGLQPDESGIQPDESGLLANVPGLQPHVTGIQPDEPGIQPD*PGIF 394
PG P P G P P P P P P P P
Sbjct: 1591 PGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1650
Query: 395 ADQPGIQPNVAGVQPDVAGLQPD*P 469
P P P P P
Sbjct: 1651 PTSPSYSPTSPAYSPTSPAYSPTSP 1675
Score = 37.4 bits (85), Expect = 0.087
Identities = 29/103 (28%), Positives = 40/103 (38%)
Frame = -2
Query: 459 GCKPATSGCTPATLGCMPGWSANMPG*SGCMPGSSGCMPVTWGCRPGTLASRPDSSGCMP 280
G P++ G +P + PG+S PG S PG S P PG + P S P
Sbjct: 1564 GYSPSSPGYSPTS----PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 1619
Query: 279 DSSGCRPARSGCRPVMWGCRPGSSGCTPGWWGCNAGWWGCSPA 151
S P+ S P P S +P + + + SPA
Sbjct: 1620 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPA 1662
Score = 33.1 bits (74), Expect = 1.6
Identities = 28/106 (26%), Positives = 38/106 (35%), Gaps = 3/106 (2%)
Frame = -2
Query: 459 GCKPATSGCTPATLG---CMPGWSANMPG*SGCMPGSSGCMPVTWGCRPGTLASRPDSSG 289
G P + G +P + G PG+S P S PG S P P + P S
Sbjct: 1571 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSP 1630
Query: 288 CMPDSSGCRPARSGCRPVMWGCRPGSSGCTPGWWGCNAGWWGCSPA 151
P S P+ S P P S +P + + + SPA
Sbjct: 1631 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPA 1676
Score = 32.7 bits (73), Expect = 2.1
Identities = 25/86 (29%), Positives = 33/86 (38%)
Frame = -2
Query: 408 PGWSANMPG*SGCMPGSSGCMPVTWGCRPGTLASRPDSSGCMPDSSGCRPARSGCRPVMW 229
PG+S + PG S PG S P PG + P S P S PA S P
Sbjct: 1563 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYS 1622
Query: 228 GCRPGSSGCTPGWWGCNAGWWGCSPA 151
P S +P + + + SP+
Sbjct: 1623 PTSPSYSPTSPSYSPTSPSYSPTSPS 1648
>pir||JDMU1 DNA-directed RNA polymerase (EC 2.7.7.6) II largest chain -
Arabidopsis thaliana
Length = 1834
Score = 246 bits (629), Expect = 7e-65
Identities = 123/173 (71%), Positives = 137/173 (79%), Gaps = 19/173 (10%)
Frame = +3
Query: 6 GPMSPSHLLSP----------MHSPFVGS---------GFSPMHPGAFSPAHGGGVGGPM 128
G MSP++LLSP SP+VG G+SP PG +SP G P
Sbjct: 1500 GMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG-YSPTSPGY--SPT 1556
Query: 129 SPGYSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 308
SPGYSPTSPGYSPTSP YSP+SP YSPTSPAYSPTSP+YSPTSP+YSPTSP+YSPTSP+Y
Sbjct: 1557 SPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1616
Query: 309 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 467
SPTSP+YSPTSP+YSPTSPAYSPTSPAYSPTSPAYSPTSP+YSPTSP+YSPTS
Sbjct: 1617 SPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1669
Score = 238 bits (608), Expect = 2e-62
Identities = 116/154 (75%), Positives = 130/154 (84%), Gaps = 1/154 (0%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SP + SP +SP G+SP PG +SP P SPGYSPTSP YSPTSP YS
Sbjct: 1541 PSSPGYSPTSPGYSP-TSPGYSPTSPG-YSPT--SPTYSPSSPGYSPTSPAYSPTSPSYS 1596
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 365
PTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSPAYSPTSPAYSPTSPAYSPTSP
Sbjct: 1597 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSP 1656
Query: 366 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 467
+YSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTS
Sbjct: 1657 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1690
Score = 236 bits (601), Expect = 1e-61
Identities = 116/154 (75%), Positives = 128/154 (82%), Gaps = 1/154 (0%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SP + SP +SP G+SP P A+SP P SP YSPTSP YSPTSP YS
Sbjct: 1562 PTSPGYSPTSPTYSPS-SPGYSPTSP-AYSPTSPSY--SPTSPSYSPTSPSYSPTSPSYS 1617
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 365
PTSP+YSPTSP+YSPTSPAYSPTSPAYSPTSPAYSPTSP+YSPTSP+YSPTSP+YSPTSP
Sbjct: 1618 PTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSP 1677
Query: 366 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 467
+YSPTSP+YSPTSPAYSPTSP YSPTSP+YSPTS
Sbjct: 1678 SYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTS 1711
Score = 231 bits (588), Expect = 4e-60
Identities = 113/154 (73%), Positives = 127/154 (82%), Gaps = 1/154 (0%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SP++ SP +SP +SP P ++SP P SP YSPTSP YSPTSP YS
Sbjct: 1569 PTSPTYSPSSPGYSP-TSPAYSPTSP-SYSPTSPS--YSPTSPSYSPTSPSYSPTSPSYS 1624
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 365
PTSP+YSPTSPAYSPTSPAYSPTSPAYSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSP
Sbjct: 1625 PTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1684
Query: 366 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 467
+YSPTSPAYSPTSP YSPTSP+YSPTSP+Y PTS
Sbjct: 1685 SYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTS 1718
Score = 228 bits (581), Expect = 3e-59
Identities = 111/154 (72%), Positives = 125/154 (81%), Gaps = 1/154 (0%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SP + SP +SP +SP P ++SP P SP YSPTSP YSPTSP YS
Sbjct: 1576 PSSPGYSPTSPAYSP-TSPSYSPTSP-SYSPTSPSY--SPTSPSYSPTSPSYSPTSPSYS 1631
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 365
PTSPAYSPTSPAYSPTSPAYSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSP
Sbjct: 1632 PTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1691
Query: 366 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 467
AYSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S
Sbjct: 1692 AYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQS 1725
Score = 220 bits (561), Expect = 6e-57
Identities = 107/153 (69%), Positives = 123/153 (79%), Gaps = 1/153 (0%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SP++ SP +SP +SP P ++SP P SP YSPTSP YSPTSP YS
Sbjct: 1583 PTSPAYSPTSPSYSP-TSPSYSPTSP-SYSPTSPSY--SPTSPSYSPTSPSYSPTSPAYS 1638
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 365
PTSPAYSPTSPAYSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSPAYSPTSP
Sbjct: 1639 PTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 1698
Query: 366 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 464
YSPTSP+YSPTSP+Y PTSP+Y+P S YSP+
Sbjct: 1699 GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPS 1731
Score = 185 bits (470), Expect = 2e-46
Identities = 104/187 (55%), Positives = 116/187 (61%), Gaps = 34/187 (18%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SPS+ SP +SP +SP P A+SP P SP YSPTSP YSPTSP YS
Sbjct: 1625 PTSPSYSPTSPAYSP-TSPAYSPTSP-AYSPTSPSY--SPTSPSYSPTSPSYSPTSPSYS 1680
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY-------------------------- 287
PTSP+YSPTSPAYSPTSP YSPTSP+YSPTSP+Y
Sbjct: 1681 PTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNAR 1740
Query: 288 -------SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 446
SPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT
Sbjct: 1741 LSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 1799
Query: 447 PAYSPTS 467
P YSP+S
Sbjct: 1800 PGYSPSS 1806
Score = 108 bits (270), Expect = 3e-23
Identities = 70/151 (46%), Positives = 80/151 (52%), Gaps = 35/151 (23%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGY-------- 161
P SPS+ SP +SP +SP P A+SP G P SP YSPTSP Y
Sbjct: 1667 PTSPSYSPTSPSYSP-TSPSYSPTSP-AYSPTSPGY--SPTSPSYSPTSPSYGPTSPSYN 1722
Query: 162 -------------------------SPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 266
SPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP
Sbjct: 1723 PQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 1782
Query: 267 SPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 356
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1783 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 1812
Score = 47.8 bits (112), Expect = 6e-05
Identities = 26/105 (24%), Positives = 26/105 (24%)
Frame = +2
Query: 155 GLQPHQPALQPHQPGVQPDEPGLQPHITGLQPDLAGLQPDESGIQPDESGLLANVPGLQP 334
G P P P PG P PG P G P P G P P P
Sbjct: 1538 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 1597
Query: 335 HVTGIQPDEPGIQPD*PGIFADQPGIQPNVAGVQPDVAGLQPD*P 469
P P P P P P P P P
Sbjct: 1598 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 1642
Score = 47.4 bits (111), Expect = 8e-05
Identities = 34/145 (23%), Positives = 36/145 (24%), Gaps = 1/145 (0%)
Frame = +2
Query: 38 NALALRGQRLQPHAPRCFQPGARRRRGRPHVAR-LQPHVAGLQPHQPALQPHQPGVQPDE 214
N L RL P + F P P + P G P P P PG P
Sbjct: 1505 NYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTS 1564
Query: 215 PGLQPHITGLQPDLAGLQPDESGIQPDESGLLANVPGLQPHVTGIQPDEPGIQPD*PGIF 394
PG P P G P P P P P P P P
Sbjct: 1565 PGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1624
Query: 395 ADQPGIQPNVAGVQPDVAGLQPD*P 469
P P P P P
Sbjct: 1625 PTSPSYSPTSPAYSPTSPAYSPTSP 1649
Score = 37.4 bits (85), Expect = 0.087
Identities = 29/103 (28%), Positives = 40/103 (38%)
Frame = -2
Query: 459 GCKPATSGCTPATLGCMPGWSANMPG*SGCMPGSSGCMPVTWGCRPGTLASRPDSSGCMP 280
G P++ G +P + PG+S PG S PG S P PG + P S P
Sbjct: 1538 GYSPSSPGYSPTS----PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 1593
Query: 279 DSSGCRPARSGCRPVMWGCRPGSSGCTPGWWGCNAGWWGCSPA 151
S P+ S P P S +P + + + SPA
Sbjct: 1594 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPA 1636
Score = 33.1 bits (74), Expect = 1.6
Identities = 28/106 (26%), Positives = 38/106 (35%), Gaps = 3/106 (2%)
Frame = -2
Query: 459 GCKPATSGCTPATLG---CMPGWSANMPG*SGCMPGSSGCMPVTWGCRPGTLASRPDSSG 289
G P + G +P + G PG+S P S PG S P P + P S
Sbjct: 1545 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSP 1604
Query: 288 CMPDSSGCRPARSGCRPVMWGCRPGSSGCTPGWWGCNAGWWGCSPA 151
P S P+ S P P S +P + + + SPA
Sbjct: 1605 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPA 1650
Score = 32.7 bits (73), Expect = 2.1
Identities = 25/86 (29%), Positives = 33/86 (38%)
Frame = -2
Query: 408 PGWSANMPG*SGCMPGSSGCMPVTWGCRPGTLASRPDSSGCMPDSSGCRPARSGCRPVMW 229
PG+S + PG S PG S P PG + P S P S PA S P
Sbjct: 1537 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYS 1596
Query: 228 GCRPGSSGCTPGWWGCNAGWWGCSPA 151
P S +P + + + SP+
Sbjct: 1597 PTSPSYSPTSPSYSPTSPSYSPTSPS 1622
>ref|NP_195305.1| DNA-directed RNA polymerase (EC 2.7.7.6) II largest chain
[Arabidopsis thaliana] gi|12644149|sp|P18616|RPB1_ARATH
DNA-directed RNA polymerase II largest subunit
gi|25288404|pir||G85422 hypothetical protein AT4g35800
[imported] - Arabidopsis thaliana
gi|4883421|emb|CAA21466.2| DNA-directed RNA polymerase
(EC 2.7.7.6) II largest chain [Arabidopsis thaliana]
gi|7270532|emb|CAB81489.1| DNA-directed RNA polymerase
(EC 2.7.7.6) II largest chain [Arabidopsis thaliana]
Length = 1840
Score = 246 bits (629), Expect = 7e-65
Identities = 123/173 (71%), Positives = 137/173 (79%), Gaps = 19/173 (10%)
Frame = +3
Query: 6 GPMSPSHLLSP----------MHSPFVGS---------GFSPMHPGAFSPAHGGGVGGPM 128
G MSP++LLSP SP+VG G+SP PG +SP G P
Sbjct: 1506 GMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG-YSPTSPGY--SPT 1562
Query: 129 SPGYSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 308
SPGYSPTSPGYSPTSP YSP+SP YSPTSPAYSPTSP+YSPTSP+YSPTSP+YSPTSP+Y
Sbjct: 1563 SPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1622
Query: 309 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 467
SPTSP+YSPTSP+YSPTSPAYSPTSPAYSPTSPAYSPTSP+YSPTSP+YSPTS
Sbjct: 1623 SPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1675
Score = 238 bits (608), Expect = 2e-62
Identities = 116/154 (75%), Positives = 130/154 (84%), Gaps = 1/154 (0%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SP + SP +SP G+SP PG +SP P SPGYSPTSP YSPTSP YS
Sbjct: 1547 PSSPGYSPTSPGYSP-TSPGYSPTSPG-YSPT--SPTYSPSSPGYSPTSPAYSPTSPSYS 1602
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 365
PTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSPAYSPTSPAYSPTSPAYSPTSP
Sbjct: 1603 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSP 1662
Query: 366 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 467
+YSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTS
Sbjct: 1663 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1696
Score = 236 bits (601), Expect = 1e-61
Identities = 116/154 (75%), Positives = 128/154 (82%), Gaps = 1/154 (0%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SP + SP +SP G+SP P A+SP P SP YSPTSP YSPTSP YS
Sbjct: 1568 PTSPGYSPTSPTYSPS-SPGYSPTSP-AYSPTSPSY--SPTSPSYSPTSPSYSPTSPSYS 1623
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 365
PTSP+YSPTSP+YSPTSPAYSPTSPAYSPTSPAYSPTSP+YSPTSP+YSPTSP+YSPTSP
Sbjct: 1624 PTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 366 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 467
+YSPTSP+YSPTSPAYSPTSP YSPTSP+YSPTS
Sbjct: 1684 SYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTS 1717
Score = 231 bits (588), Expect = 4e-60
Identities = 113/154 (73%), Positives = 127/154 (82%), Gaps = 1/154 (0%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SP++ SP +SP +SP P ++SP P SP YSPTSP YSPTSP YS
Sbjct: 1575 PTSPTYSPSSPGYSP-TSPAYSPTSP-SYSPTSPS--YSPTSPSYSPTSPSYSPTSPSYS 1630
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 365
PTSP+YSPTSPAYSPTSPAYSPTSPAYSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSP
Sbjct: 1631 PTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 366 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 467
+YSPTSPAYSPTSP YSPTSP+YSPTSP+Y PTS
Sbjct: 1691 SYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTS 1724
Score = 228 bits (581), Expect = 3e-59
Identities = 111/154 (72%), Positives = 125/154 (81%), Gaps = 1/154 (0%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SP + SP +SP +SP P ++SP P SP YSPTSP YSPTSP YS
Sbjct: 1582 PSSPGYSPTSPAYSP-TSPSYSPTSP-SYSPTSPSY--SPTSPSYSPTSPSYSPTSPSYS 1637
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 365
PTSPAYSPTSPAYSPTSPAYSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSP
Sbjct: 1638 PTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1697
Query: 366 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 467
AYSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S
Sbjct: 1698 AYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQS 1731
Score = 220 bits (561), Expect = 6e-57
Identities = 107/153 (69%), Positives = 123/153 (79%), Gaps = 1/153 (0%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SP++ SP +SP +SP P ++SP P SP YSPTSP YSPTSP YS
Sbjct: 1589 PTSPAYSPTSPSYSP-TSPSYSPTSP-SYSPTSPSY--SPTSPSYSPTSPSYSPTSPAYS 1644
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 365
PTSPAYSPTSPAYSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSP+YSPTSPAYSPTSP
Sbjct: 1645 PTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 1704
Query: 366 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 464
YSPTSP+YSPTSP+Y PTSP+Y+P S YSP+
Sbjct: 1705 GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPS 1737
Score = 185 bits (470), Expect = 2e-46
Identities = 104/187 (55%), Positives = 116/187 (61%), Gaps = 34/187 (18%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYS 185
P SPS+ SP +SP +SP P A+SP P SP YSPTSP YSPTSP YS
Sbjct: 1631 PTSPSYSPTSPAYSP-TSPAYSPTSP-AYSPTSPSY--SPTSPSYSPTSPSYSPTSPSYS 1686
Query: 186 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY-------------------------- 287
PTSP+YSPTSPAYSPTSP YSPTSP+YSPTSP+Y
Sbjct: 1687 PTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNAR 1746
Query: 288 -------SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 446
SPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT
Sbjct: 1747 LSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 1805
Query: 447 PAYSPTS 467
P YSP+S
Sbjct: 1806 PGYSPSS 1812
Score = 108 bits (270), Expect = 3e-23
Identities = 70/151 (46%), Positives = 80/151 (52%), Gaps = 35/151 (23%)
Frame = +3
Query: 9 PMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGY-------- 161
P SPS+ SP +SP +SP P A+SP G P SP YSPTSP Y
Sbjct: 1673 PTSPSYSPTSPSYSP-TSPSYSPTSP-AYSPTSPGY--SPTSPSYSPTSPSYGPTSPSYN 1728
Query: 162 -------------------------SPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 266
SPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP
Sbjct: 1729 PQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 1788
Query: 267 SPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 356
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1789 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 1818
Score = 47.8 bits (112), Expect = 6e-05
Identities = 26/105 (24%), Positives = 26/105 (24%)
Frame = +2
Query: 155 GLQPHQPALQPHQPGVQPDEPGLQPHITGLQPDLAGLQPDESGIQPDESGLLANVPGLQP 334
G P P P PG P PG P G P P G P P P
Sbjct: 1544 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 1603
Query: 335 HVTGIQPDEPGIQPD*PGIFADQPGIQPNVAGVQPDVAGLQPD*P 469
P P P P P P P P P
Sbjct: 1604 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 1648
Score = 47.4 bits (111), Expect = 8e-05
Identities = 34/145 (23%), Positives = 36/145 (24%), Gaps = 1/145 (0%)
Frame = +2
Query: 38 NALALRGQRLQPHAPRCFQPGARRRRGRPHVAR-LQPHVAGLQPHQPALQPHQPGVQPDE 214
N L RL P + F P P + P G P P P PG P
Sbjct: 1511 NYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTS 1570
Query: 215 PGLQPHITGLQPDLAGLQPDESGIQPDESGLLANVPGLQPHVTGIQPDEPGIQPD*PGIF 394
PG P P G P P P P P P P P
Sbjct: 1571 PGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1630
Query: 395 ADQPGIQPNVAGVQPDVAGLQPD*P 469
P P P P P
Sbjct: 1631 PTSPSYSPTSPAYSPTSPAYSPTSP 1655
Score = 37.4 bits (85), Expect = 0.087
Identities = 29/103 (28%), Positives = 40/103 (38%)
Frame = -2
Query: 459 GCKPATSGCTPATLGCMPGWSANMPG*SGCMPGSSGCMPVTWGCRPGTLASRPDSSGCMP 280
G P++ G +P + PG+S PG S PG S P PG + P S P
Sbjct: 1544 GYSPSSPGYSPTS----PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 1599
Query: 279 DSSGCRPARSGCRPVMWGCRPGSSGCTPGWWGCNAGWWGCSPA 151
S P+ S P P S +P + + + SPA
Sbjct: 1600 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPA 1642
Score = 33.1 bits (74), Expect = 1.6
Identities = 28/106 (26%), Positives = 38/106 (35%), Gaps = 3/106 (2%)
Frame = -2
Query: 459 GCKPATSGCTPATLG---CMPGWSANMPG*SGCMPGSSGCMPVTWGCRPGTLASRPDSSG 289
G P + G +P + G PG+S P S PG S P P + P S
Sbjct: 1551 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSP 1610
Query: 288 CMPDSSGCRPARSGCRPVMWGCRPGSSGCTPGWWGCNAGWWGCSPA 151
P S P+ S P P S +P + + + SPA
Sbjct: 1611 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPA 1656
Score = 32.7 bits (73), Expect = 2.1
Identities = 25/86 (29%), Positives = 33/86 (38%)
Frame = -2
Query: 408 PGWSANMPG*SGCMPGSSGCMPVTWGCRPGTLASRPDSSGCMPDSSGCRPARSGCRPVMW 229
PG+S + PG S PG S P PG + P S P S PA S P
Sbjct: 1543 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYS 1602
Query: 228 GCRPGSSGCTPGWWGCNAGWWGCSPA 151
P S +P + + + SP+
Sbjct: 1603 PTSPSYSPTSPSYSPTSPSYSPTSPS 1628
