KCC003220A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003220A_C01 KCC003220A_c01
caaGTCGTAACAGTGATACATTGCATTTAATCTCGTTCTCATATCAGGCCGTCCACCCAT
CACAGAGCAGGACGACTGAACATCGGCTGGGGCAACAACGAAGGAAGTCAGCCGCAGCCT
GGAGCTTATCGGACGCTGACTGTCTGGTACCTGGACCTTCTCGCCGCAGCATCATGAGCT
GGAACCAGGCGCCAGGTGCACCTGGAGGACCCTACATGGAGGCCTACCACCAACACCATC
ATCATGGAGGAGATGGAGCTCAGCCTCCACACCCTGGTCACGGGGCGCCACCGCCGCTCG
CGCCACACGTGGTGGCTGTGCCGCCGCCCTGGCACCAGCTGCCGCAGCAGCAACAACACC
AGGCCCCACCAACAGTACAGCACCAGCCACTGCAATTGCCGCAGCCTGTGCCTCAGCCGG
CCCCGCAGCAGCCCTACCACCACCCGGGGCCGGCCTTTGCGGCTCCCTCAGACGTTCTGC
CGCCACATATGCTAGCTCTCGCGCCCCTGCAGCCGCAGCCGCCGGCACACGCCTTGGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003220A_C01 KCC003220A_c01
         (538 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAG15240.1|AF289097_1 ENOD2 [Styphnolobium japonicum]               62  5e-09
emb|CAD88221.2| C. elegans GRL-25 protein (corresponding sequenc...    61  1e-08
ref|XP_126694.1| RIKEN cDNA A030006P16 [Mus musculus] gi|1286136...    60  2e-08
gb|AAD55979.1|AF159296_1 extensin-like protein [Lycopersicon esc...    58  7e-08
sp|P20730|CHHC_BOMMO Chorion class high-cysteine HCB protein 13 ...    58  9e-08

>gb|AAG15240.1|AF289097_1 ENOD2 [Styphnolobium japonicum]
          Length = 269

 Score = 62.0 bits (149), Expect = 5e-09
 Identities = 41/115 (35%), Positives = 51/115 (43%), Gaps = 13/115 (11%)
 Frame = +3

Query: 225 YHQHHHHGGDGAQPPHPGHGAPPPLAPHVVAVPPPWHQLPQQQ----QHQAPPTVQHQPL 392
           Y   HH     A PP P H  PPP+ P     PPP +Q P  +    ++Q PP V+  P 
Sbjct: 10  YQPPHHEKPPPAYPP-PHHEIPPPVYPSPHEKPPPEYQPPPHEKPPPEYQPPPHVKPPPA 68

Query: 393 QLPQPVPQPAP-QQPYHH--------PGPAFAAPSDVLPPHMLALAPLQPQPPAH 530
             P P  +P P  QP HH        P P    P +  PPH +   P+ P PP H
Sbjct: 69  YQPPPHVKPPPVYQPPHHEKPPPEYQPPPHEKPPPEYQPPHHVKPPPVYP-PPHH 122

 Score = 52.4 bits (124), Expect = 4e-06
 Identities = 34/94 (36%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
 Frame = +3

Query: 264 PPH----PGHGAPPPLAPHVVAVPPPWHQLPQQQQHQAPPTVQHQPLQLPQPVPQPAP-Q 428
           PPH    P +  PP + P  V  PPP H++P  + +Q P  V+  P+  P P  +P P  
Sbjct: 144 PPHVKPPPVYQPPPHVKPPPVYQPPPHHEIPPPE-YQPPHHVKPPPVYQPPPHEKPPPVY 202

Query: 429 QPYHHPGPAFAAPSDVLPPHMLALAPLQPQPPAH 530
           QP HH       P  V PP      P + QPP H
Sbjct: 203 QPPHHE-----IPPPVYPPPRENKPPPEYQPPPH 231

 Score = 52.4 bits (124), Expect = 4e-06
 Identities = 38/107 (35%), Positives = 44/107 (40%), Gaps = 5/107 (4%)
 Frame = +3

Query: 225 YHQHHHHGGDGAQPPHPGHGAPPPL---APHVVAVPPPWHQLPQQQQHQAPPTVQHQPLQ 395
           Y   HH       PP P H  PPP+    PH    PPP +Q P    H  PP V   P  
Sbjct: 105 YQPPHHVKPPPVYPP-PHHEKPPPVHQPPPH--EKPPPEYQPP---PHVKPPPVYQPP-- 156

Query: 396 LPQPVPQPAPQQPYHH--PGPAFAAPSDVLPPHMLALAPLQPQPPAH 530
            P   P P  Q P HH  P P +  P  V PP +    P +  PP +
Sbjct: 157 -PHVKPPPVYQPPPHHEIPPPEYQPPHHVKPPPVYQPPPHEKPPPVY 202

 Score = 48.9 bits (115), Expect = 4e-05
 Identities = 35/97 (36%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
 Frame = +3

Query: 261 QPPHPGHGAPPP-LAPHVVAVPPPWHQLPQQQQHQAPPTVQHQP-LQLPQPVPQPAPQQ- 431
           QPPH  H  PPP   P     PPP +Q P    H  PP V   P  + P PV QP P + 
Sbjct: 82  QPPH--HEKPPPEYQPPPHEKPPPEYQPP---HHVKPPPVYPPPHHEKPPPVHQPPPHEK 136

Query: 432 --PYHHPGPAFAAPSDVLPPHMLALAPLQPQPPAHAL 536
             P + P P    P    PP  +   P+   PP H +
Sbjct: 137 PPPEYQPPPHVKPPPVYQPPPHVKPPPVYQPPPHHEI 173

 Score = 48.9 bits (115), Expect = 4e-05
 Identities = 38/108 (35%), Positives = 49/108 (45%), Gaps = 19/108 (17%)
 Frame = +3

Query: 264 PPH----PG-----HGAPPPL---APHV----VAVPPPWHQLPQQQQHQAPPTVQHQPLQ 395
           PPH    P      H  PPP+    PHV    V  PPP H++P   ++Q P  V+  P+ 
Sbjct: 132 PPHEKPPPEYQPPPHVKPPPVYQPPPHVKPPPVYQPPPHHEIP-PPEYQPPHHVKPPPVY 190

Query: 396 LPQPVPQPAP-QQPYHH--PGPAFAAPSDVLPPHMLALAPLQPQPPAH 530
            P P  +P P  QP HH  P P +  P +  PP      P    PPA+
Sbjct: 191 QPPPHEKPPPVYQPPHHEIPPPVYPPPRENKPPPEYQPPPHVKPPPAY 238

 Score = 47.0 bits (110), Expect = 2e-04
 Identities = 35/93 (37%), Positives = 45/93 (47%), Gaps = 3/93 (3%)
 Frame = +3

Query: 261 QPPHPGHGAPPP--LAPHVVAVPPPWHQLPQQQQHQAPPTVQHQP-LQLPQPVPQPAPQQ 431
           QPP P H  PPP    PH V  PPP +Q P    H+ PP V   P  ++P PV  P P++
Sbjct: 166 QPP-PHHEIPPPEYQPPHHVK-PPPVYQPP---PHEKPPPVYQPPHHEIPPPV-YPPPRE 219

Query: 432 PYHHPGPAFAAPSDVLPPHMLALAPLQPQPPAH 530
             + P P +  P  V PP      P +  PP +
Sbjct: 220 --NKPPPEYQPPPHVKPPPAYQPPPHEKPPPVY 250

 Score = 47.0 bits (110), Expect = 2e-04
 Identities = 35/102 (34%), Positives = 44/102 (42%), Gaps = 17/102 (16%)
 Frame = +3

Query: 234 HHHHGGDGAQPPH----------PGHGAPPPL--APHVVAVPPPWHQLPQQQ----QHQA 365
           HH       QPPH          P H  PPP+   PH   +PPP +  P++     ++Q 
Sbjct: 170 HHEIPPPEYQPPHHVKPPPVYQPPPHEKPPPVYQPPHH-EIPPPVYPPPRENKPPPEYQP 228

Query: 366 PPTVQHQPLQLPQPVPQPAP-QQPYHHPGPAFAAPSDVLPPH 488
           PP V+  P   P P  +P P   P HH  P  A P    PPH
Sbjct: 229 PPHVKPPPAYQPPPHEKPPPVYPPPHHEKPPPAYP----PPH 266

 Score = 45.4 bits (106), Expect = 5e-04
 Identities = 33/102 (32%), Positives = 41/102 (39%)
 Frame = +3

Query: 225 YHQHHHHGGDGAQPPHPGHGAPPPLAPHVVAVPPPWHQLPQQQQHQAPPTVQHQPLQLPQ 404
           Y   H       QPP P    PP   P     PPP +Q P    H  PP V +QP    +
Sbjct: 34  YPSPHEKPPPEYQPP-PHEKPPPEYQPPPHVKPPPAYQPP---PHVKPPPV-YQPPHHEK 88

Query: 405 PVPQPAPQQPYHHPGPAFAAPSDVLPPHMLALAPLQPQPPAH 530
           P P+  P  P+  P P +  P  V PP +      +  PP H
Sbjct: 89  PPPEYQP-PPHEKPPPEYQPPHHVKPPPVYPPPHHEKPPPVH 129

 Score = 42.7 bits (99), Expect = 0.003
 Identities = 31/98 (31%), Positives = 39/98 (39%), Gaps = 22/98 (22%)
 Frame = +3

Query: 303 PHVVAVP----PPWHQLP----QQQQHQAPPTVQHQPLQLPQPVPQPAPQQ--------- 431
           PH V  P    PP H+ P        H+ PP V   P + P P  QP P +         
Sbjct: 1   PHHVKPPPVYQPPHHEKPPPAYPPPHHEIPPPVYPSPHEKPPPEYQPPPHEKPPPEYQPP 60

Query: 432 PYHHPGPAFAAPSDVLPPHML-----ALAPLQPQPPAH 530
           P+  P PA+  P  V PP +         P + QPP H
Sbjct: 61  PHVKPPPAYQPPPHVKPPPVYQPPHHEKPPPEYQPPPH 98

 Score = 35.4 bits (80), Expect = 0.48
 Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = +3

Query: 261 QPPHPGHGAPPPLAPHVVA-VPPPWHQLPQQQQ----HQAPPTVQHQPLQLPQPVPQPAP 425
           QPPH  H  PPP+ P      PPP +Q P   +    +Q PP  +  P+  P    +P P
Sbjct: 203 QPPH--HEIPPPVYPPPRENKPPPEYQPPPHVKPPPAYQPPPHEKPPPVYPPPHHEKPPP 260

Query: 426 QQPYHHPGP 452
             P  H  P
Sbjct: 261 AYPPPHEKP 269

 Score = 34.7 bits (78), Expect = 0.82
 Identities = 21/69 (30%), Positives = 25/69 (35%)
 Frame = +3

Query: 225 YHQHHHHGGDGAQPPHPGHGAPPPLAPHVVAVPPPWHQLPQQQQHQAPPTVQHQPLQLPQ 404
           Y   HH       PP   +  PP   P     PPP +Q P    H+ PP V   P     
Sbjct: 202 YQPPHHEIPPPVYPPPRENKPPPEYQPPPHVKPPPAYQPP---PHEKPPPVYPPPHHEKP 258

Query: 405 PVPQPAPQQ 431
           P   P P +
Sbjct: 259 PPAYPPPHE 267

>emb|CAD88221.2| C. elegans GRL-25 protein (corresponding sequence ZK643.8)
           [Caenorhabditis elegans] gi|33300318|emb|CAD88219.2| C.
           elegans GRL-25 protein (corresponding sequence ZK643.8)
           [Caenorhabditis elegans]
          Length = 774

 Score = 60.8 bits (146), Expect = 1e-08
 Identities = 40/97 (41%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
 Frame = -1

Query: 538 PKACAGGC-----GCRGARASICGGRTSEGAAKAGPGWW*GCCGAG*GTGCGNCSGWCCT 374
           P  C GGC     GC G     CGG    G    G G   G CG G G GCG   G C  
Sbjct: 76  PAPCGGGCGGGGGGCGGGGGG-CGGGGGCGGGGGGCGGGGGGCGGG-GGGCGGGGGGCGG 133

Query: 373 VGGAWCCCCCGSWCQGGGTATTCGASGGGAP*PGCGG 263
            GG  C       C GGG++  CG  GGG    GCGG
Sbjct: 134 GGGGGCGGGSSGGC-GGGSSGGCGGGGGG----GCGG 165

 Score = 56.2 bits (134), Expect = 3e-07
 Identities = 35/89 (39%), Positives = 36/89 (40%)
 Frame = -1

Query: 529 CAGGCGCRGARASICGGRTSEGAAKAGPGWW*GCCGAG*GTGCGNCSGWCCTVGGAWCCC 350
           C GG GC G      GG    G    G G   G CG G G GCG  S   C  G +  C 
Sbjct: 97  CGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGC- 155

Query: 349 CCGSWCQGGGTATTCGASGGGAP*PGCGG 263
                  GGG    CG  GGG    GCGG
Sbjct: 156 -------GGGGGGGCGGGGGG----GCGG 173

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 41/103 (39%), Positives = 41/103 (39%), Gaps = 11/103 (10%)
 Frame = -1

Query: 538 PKACAGGCGCRGARASICGGRTSEGAAKAGPGWW*GCCGAG*GTGCGNCSGWC-----CT 374
           P  C GGCG  G     CGG    G     P    G CG G G GCG   G C     C 
Sbjct: 52  PAPCGGGCGGGGGG---CGGG---GGCAPPPAPCGGGCGGG-GGGCGGGGGGCGGGGGCG 104

Query: 373 VGGAWC------CCCCGSWCQGGGTATTCGASGGGAP*PGCGG 263
            GG  C      C   G  C GGG    CG  GGG    GCGG
Sbjct: 105 GGGGGCGGGGGGCGGGGGGCGGGGGG--CGGGGGG----GCGG 141

 Score = 48.9 bits (115), Expect = 4e-05
 Identities = 36/91 (39%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
 Frame = -1

Query: 523 GGCGCRGARASICGGRTSEGAAKAGPGWW*GCCGAG*GTGCGNCSGWCCTVGGAWCCCCC 344
           GG GC G  +  CGG +S G    G G     CG G G GCG   G     GG       
Sbjct: 135 GGGGCGGGSSGGCGGGSSGGCGGGGGGG----CGGGGGGGCG---GGSSGGGGYAVAPSG 187

Query: 343 GSWCQGGGTATTCG----ASGGGAP*PGCGG 263
           G  C GGG++   G     SGGG    GCGG
Sbjct: 188 GGGCGGGGSSGGGGYAVAPSGGG----GCGG 214

 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 36/104 (34%), Positives = 36/104 (34%), Gaps = 17/104 (16%)
 Frame = -1

Query: 523 GGCGCRGARASICGG-----------RTSEGAAKAGPGWW*GC------CGAG*GTGCGN 395
           GG GC G     CGG               G    G G   GC      CG G G G G 
Sbjct: 30  GGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGG 89

Query: 394 CSGWCCTVGGAWCCCCCGSWCQGGGTATTCGASGGGAP*PGCGG 263
           C G     GG   C   G  C GGG     G  G G    GCGG
Sbjct: 90  CGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGG 133

 Score = 47.0 bits (110), Expect = 2e-04
 Identities = 36/99 (36%), Positives = 37/99 (37%), Gaps = 10/99 (10%)
 Frame = -1

Query: 529 CAGGCG--CRGARASICGGRTSEGAAKAGPGWW*GCCGAG*GTGC--------GNCSGWC 380
           C GGCG  C G      GG  +   A  G G   G  G G G GC        G C G  
Sbjct: 34  CGGGCGGGCGG------GGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGG 87

Query: 379 CTVGGAWCCCCCGSWCQGGGTATTCGASGGGAP*PGCGG 263
              GG    C  G  C GGG     G  G G    GCGG
Sbjct: 88  GGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGG 126

 Score = 46.2 bits (108), Expect = 3e-04
 Identities = 33/94 (35%), Positives = 34/94 (36%), Gaps = 7/94 (7%)
 Frame = -1

Query: 523 GGCGCRGARASICGGRTSEGAAKAGPGWW*GC-------CGAG*GTGCGNCSGWCCTVGG 365
           GGCG  G      GG    G    G G   GC       CG G   GCG   G  C  GG
Sbjct: 108 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGG 167

Query: 364 AWCCCCCGSWCQGGGTATTCGASGGGAP*PGCGG 263
                 CG    GGG      + GG     GCGG
Sbjct: 168 GG---GCGGGSSGGGGYAVAPSGGG-----GCGG 193

 Score = 45.1 bits (105), Expect = 6e-04
 Identities = 31/72 (43%), Positives = 31/72 (43%), Gaps = 8/72 (11%)
 Frame = -1

Query: 454 AGPGWW*GCCGAG*GTGCGNCSGWCCTVGGAWCC---CCCGSWCQGGGTATTCGASGGGA 284
           AG G   G CG G G GCG         GG  C      CG  C GGG    CG  GG A
Sbjct: 25  AGGGGGGGGCGGGCGGGCG---------GGGGCAPPPAPCGGGCGGGGGG--CGGGGGCA 73

Query: 283 P*P-----GCGG 263
           P P     GCGG
Sbjct: 74  PPPAPCGGGCGG 85

 Score = 36.6 bits (83), Expect = 0.21
 Identities = 29/94 (30%), Positives = 35/94 (36%), Gaps = 6/94 (6%)
 Frame = -1

Query: 526 AGGCGCRGARASICGGRTSEGAAKAGPGWW*GCCGAG*GTGCGNCSGWCCTVGGAWCCC- 350
           +GGCG  G      GG    G   +G G +      G G G G  SG     GG +    
Sbjct: 152 SGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSG-----GGGYAVAP 206

Query: 349 -----CCGSWCQGGGTATTCGASGGGAP*PGCGG 263
                C G    GGG   +  + GGG    G GG
Sbjct: 207 SGGGGCGGGGSSGGGGYASAPSGGGGYATSGGGG 240

 Score = 34.7 bits (78), Expect = 0.82
 Identities = 32/99 (32%), Positives = 40/99 (40%), Gaps = 9/99 (9%)
 Frame = -1

Query: 532 ACAGGCGCRGARASICGGRTSEGAAKAGPGWW*GCCGAG*GTGCGNCS------GWCCTV 371
           A +GG GC G      GG +  G     P    GC G G   G G  S      G+  + 
Sbjct: 184 APSGGGGCGG------GGSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGGYATSG 237

Query: 370 GGAWCCCCCGSWCQG---GGTATTCGASGGGAP*PGCGG 263
           GG       G +  G   GG  ++ G+SGGG    G GG
Sbjct: 238 GGG-----SGGYATGGSSGGGYSSGGSSGGGYSTGGGGG 271

 Score = 33.5 bits (75), Expect = 1.8
 Identities = 38/109 (34%), Positives = 45/109 (40%), Gaps = 13/109 (11%)
 Frame = -1

Query: 532 ACAGGCGCRGARASICGGRTSE-----GAAKAGPGWW*GCC---GAG*GTGCGNCSGWCC 377
           A +GG GC G  +S  GG  S      G A +G G   G      +G G   G  SG   
Sbjct: 205 APSGGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGY 264

Query: 376 TVGGAWCCCCCGSWCQGGGTATTCGASGGGAP*PGCGG-----*APSPP 245
           + GG       G +  GGG     G+SGG A   G GG      AP PP
Sbjct: 265 STGGG------GGYAGGGGGGG--GSSGGYAGSSGGGGYSAPAAAPPPP 305

 Score = 32.3 bits (72), Expect = 4.0
 Identities = 20/49 (40%), Positives = 20/49 (40%), Gaps = 8/49 (16%)
 Frame = -1

Query: 370 GGAWCCCCCGSWCQGGGTATT--------CGASGGGAP*PGCGG*APSP 248
           GG  C   CG  C GGG            CG  GGG    G GG AP P
Sbjct: 30  GGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGC--GGGGGCAPPP 76

>ref|XP_126694.1| RIKEN cDNA A030006P16 [Mus musculus] gi|12861360|dbj|BAB32179.1|
           unnamed protein product [Mus musculus]
          Length = 109

 Score = 60.1 bits (144), Expect = 2e-08
 Identities = 35/89 (39%), Positives = 40/89 (44%)
 Frame = -1

Query: 535 KACAGGCGCRGARASICGGRTSEGAAKAGPGWW*GCCGAG*GTGCGNCSGWCCTVGGAWC 356
           + C G CGC G+    CGG +  G          GCCG+G G GCG C   CC  G    
Sbjct: 26  QGCCGCCGCCGSCCG-CGGSSCGG----------GCCGSGCG-GCGGCGSSCCGSGCGGG 73

Query: 355 CCCCGSWCQGGGTATTCGASGGGAP*PGC 269
           C  CG  C GG   + C   GGG   P C
Sbjct: 74  CGGCGGGCCGG---SGCCGGGGGCCGPVC 99

 Score = 51.6 bits (122), Expect = 6e-06
 Identities = 33/90 (36%), Positives = 36/90 (39%), Gaps = 1/90 (1%)
 Frame = -1

Query: 529 CAGGC-GCRGARASICGGRTSEGAAKAGPGWW*GCCGAG*GTGCGNCSGWCCTVGGAWCC 353
           C G C  C       C     E   + G     GCCG+  G G  +C G CC   G   C
Sbjct: 4   CPGDCLNCCSQEQDCC----EECCCQQGCCGCCGCCGSCCGCGGSSCGGGCCG-SGCGGC 58

Query: 352 CCCGSWCQGGGTATTCGASGGGAP*PGCGG 263
             CGS C G G    CG  GGG     CGG
Sbjct: 59  GGCGSSCCGSGCGGGCGGCGGGC----CGG 84

>gb|AAD55979.1|AF159296_1 extensin-like protein [Lycopersicon esculentum]
          Length = 711

 Score = 58.2 bits (139), Expect = 7e-08
 Identities = 36/96 (37%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
 Frame = +3

Query: 264 PPHPGHGAPPPLA---PHVVAVPPPWHQLPQQQQHQAPPTVQHQPLQLPQPVPQP---AP 425
           PP P H  PPP+A   P V + PPP H  P    H  PP V   P  +  P P P   +P
Sbjct: 544 PPPPVHSPPPPVASPPPPVHSPPPPVHS-PPPPVHSPPPPVASPPPPVHSPPPPPPVASP 602

Query: 426 QQPYHHPGPAFAAPSDVLPPHMLALAPLQPQPPAHA 533
             P H P P  A+P    P H        P PP H+
Sbjct: 603 PPPVHSPPPPVASPPP--PVHSPPPPVASPPPPVHS 636

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 35/93 (37%), Positives = 40/93 (42%), Gaps = 3/93 (3%)
 Frame = +3

Query: 264 PPHPGHGAPPPL---APHVVAVPPPWHQLPQQQQHQAPPTVQHQPLQLPQPVPQPAPQQP 434
           PP P H  PPP+    P V + PPP H  P      +PP   H P   P PV  P P  P
Sbjct: 565 PPPPVHSPPPPVHSPPPPVASPPPPVHSPPPPPPVASPPPPVHSP---PPPVASPPP--P 619

Query: 435 YHHPGPAFAAPSDVLPPHMLALAPLQPQPPAHA 533
            H P P  A+P    P H        P PP H+
Sbjct: 620 VHSPPPPVASPPP--PVHSPPPPVHSPPPPVHS 650

 Score = 55.1 bits (131), Expect = 6e-07
 Identities = 34/99 (34%), Positives = 41/99 (41%), Gaps = 7/99 (7%)
 Frame = +3

Query: 258 AQPPHPGHGAPPPL---APHVVAVPPPWHQLPQQQQHQAPPTVQHQPLQLPQPVPQPAPQ 428
           A PP P H  PPP+    P V + PPP H  P       PP     P     P P  +P 
Sbjct: 514 ASPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVASPPPPVHSPPPPVHSPP 573

Query: 429 QPYHHPGPAFAAPSDVLPPHMLALAP----LQPQPPAHA 533
            P H P P  A+P    PP + +  P      P PP H+
Sbjct: 574 PPVHSPPPPVASP----PPPVHSPPPPPPVASPPPPVHS 608

 Score = 55.1 bits (131), Expect = 6e-07
 Identities = 33/95 (34%), Positives = 39/95 (40%), Gaps = 3/95 (3%)
 Frame = +3

Query: 258 AQPPHPGHGAPPPLAPHVVAVPPPWHQLPQQQQHQAPPTVQHQPLQLPQPVPQPAPQQPY 437
           A PP P H  PPP  P V + PPP H  P       PP     P     P P  +P  P 
Sbjct: 584 ASPPPPVHSPPPP--PPVASPPPPVHSPPPPVASPPPPVHSPPPPVASPPPPVHSPPPPV 641

Query: 438 HHPGPAFAAPSDVLPPHMLALAP---LQPQPPAHA 533
           H P P   +P    PP + +  P     P PP H+
Sbjct: 642 HSPPPPVHSP----PPPVASPPPALVFSPPPPVHS 672

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 36/93 (38%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
 Frame = +3

Query: 264 PPHPGHGAPPPL---APHVVAVPPPWHQLPQQQQHQAPPTVQHQPLQLPQPVPQPAPQQP 434
           PP P H  PPP+    P V + PPP H  P    H  PP V H P   P PV  P P  P
Sbjct: 537 PPPPVHSPPPPVHSPPPPVASPPPPVHS-PPPPVHSPPPPV-HSP---PPPVASPPP--P 589

Query: 435 YHHPGPAFAAPSDVLPPHMLALAPLQPQPPAHA 533
            H P P     S   P H        P PP H+
Sbjct: 590 VHSPPPPPPVASPPPPVHSPPPPVASPPPPVHS 622

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 34/97 (35%), Positives = 41/97 (42%), Gaps = 5/97 (5%)
 Frame = +3

Query: 258 AQPPHPGHGAPPPLA---PHVVAVPPPWHQLPQQQQHQAPPTVQHQPLQLPQPVPQPAPQ 428
           A PP P H  PPP+A   P V + PPP H  P       PP     P     P P  +P 
Sbjct: 479 ASPPPPVHSPPPPVASPPPPVHSPPPPVHSPPPPVASPPPPVHSPPPPVHSPPPPVHSPP 538

Query: 429 QPYHHPGPAFAAPSDVLPPHMLALAP--LQPQPPAHA 533
            P H P P   +P    PP + +  P    P PP H+
Sbjct: 539 PPVHSPPPPVHSP----PPPVASPPPPVHSPPPPVHS 571

 Score = 52.0 bits (123), Expect = 5e-06
 Identities = 33/103 (32%), Positives = 38/103 (36%), Gaps = 11/103 (10%)
 Frame = +3

Query: 258 AQPPHPGHGAPPPLA-----------PHVVAVPPPWHQLPQQQQHQAPPTVQHQPLQLPQ 404
           A PP P H  PPP+A           P V + PPP H  P       PP     P     
Sbjct: 450 ASPPPPVHSPPPPVASPPPPVHSPPPPPVASPPPPVHSPPPPVASPPPPVHSPPPPVHSP 509

Query: 405 PVPQPAPQQPYHHPGPAFAAPSDVLPPHMLALAPLQPQPPAHA 533
           P P  +P  P H P P   +P    P H        P PP H+
Sbjct: 510 PPPVASPPPPVHSPPPPVHSPPP--PVHSPPPPVHSPPPPVHS 550

 Score = 51.6 bits (122), Expect = 6e-06
 Identities = 37/100 (37%), Positives = 41/100 (41%), Gaps = 10/100 (10%)
 Frame = +3

Query: 264 PPHPGHGAPPPLA----------PHVVAVPPPWHQLPQQQQHQAPPTVQHQPLQLPQPVP 413
           PP P H  PPP+A          P V + PPP H  P    H  PP V H P   P PV 
Sbjct: 502 PPPPVHSPPPPVASPPPPVHSPPPPVHSPPPPVHS-PPPPVHSPPPPV-HSP---PPPVA 556

Query: 414 QPAPQQPYHHPGPAFAAPSDVLPPHMLALAPLQPQPPAHA 533
            P P  P H P P   +P    P H        P PP H+
Sbjct: 557 SPPP--PVHSPPPPVHSPPP--PVHSPPPPVASPPPPVHS 592

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 36/99 (36%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
 Frame = +3

Query: 258 AQPPHPGHGAPPPLA----------PHVVAVPPPWHQLPQQQQHQAPPTVQHQPLQLPQP 407
           A PP P H  PPP+A          P V + PPP H  P    H  PP V H P   P P
Sbjct: 600 ASPPPPVHSPPPPVASPPPPVHSPPPPVASPPPPVHS-PPPPVHSPPPPV-HSP---PPP 654

Query: 408 VPQPAPQQPYHHPGPAFAAPSDVLPPHMLALAPLQPQPP 524
           V  P P   +  P P  + P    PP     AP+   PP
Sbjct: 655 VASPPPALVFSPPPPVHSPP----PP-----APVMSPPP 684

 Score = 48.9 bits (115), Expect = 4e-05
 Identities = 34/97 (35%), Positives = 38/97 (39%), Gaps = 7/97 (7%)
 Frame = +3

Query: 264 PPHPGHGAPPPLAPHVVAVPPPWHQLPQQQQHQAPPTVQH--QPLQLPQPVPQPAPQQPY 437
           PP P H  PPP     VA PPP         H  PP V     P+  P P P  +P  P 
Sbjct: 437 PPPPVHSPPPP----PVASPPP-------PVHSPPPPVASPPPPVHSPPPPPVASPPPPV 485

Query: 438 HHPGPAFAAP-----SDVLPPHMLALAPLQPQPPAHA 533
           H P P  A+P     S   P H        P PP H+
Sbjct: 486 HSPPPPVASPPPPVHSPPPPVHSPPPPVASPPPPVHS 522

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 6/100 (6%)
 Frame = +3

Query: 252 DGAQPPHPGHGAPP-----PLAPHVVAVPPPWHQLPQQQQHQAPPTVQHQPLQLPQPVPQ 416
           +G  P  P     P     P  P     PPP   LP      +PP     P+  P P P 
Sbjct: 394 EGQSPKDPPKTVTPPKPSTPTTPKPNPSPPPPKTLPPPPPKTSPP----PPVHSPPPPPV 449

Query: 417 PAPQQPYHHPGPAFAAPSDVLPPHMLALAPL-QPQPPAHA 533
            +P  P H P P  A+P    P H     P+  P PP H+
Sbjct: 450 ASPPPPVHSPPPPVASPPP--PVHSPPPPPVASPPPPVHS 487

 Score = 43.1 bits (100), Expect = 0.002
 Identities = 33/89 (37%), Positives = 35/89 (39%)
 Frame = +3

Query: 267 PHPGHGAPPPLAPHVVAVPPPWHQLPQQQQHQAPPTVQHQPLQLPQPVPQPAPQQPYHHP 446
           P P    PPP  P   + PPP H  P       PP V H P   P PV  P P  P H P
Sbjct: 422 PPPPKTLPPP--PPKTSPPPPVHSPPPPPVASPPPPV-HSP---PPPVASPPP--PVHSP 473

Query: 447 GPAFAAPSDVLPPHMLALAPLQPQPPAHA 533
            P   A S   P H        P PP H+
Sbjct: 474 PPPPVA-SPPPPVHSPPPPVASPPPPVHS 501

 Score = 34.7 bits (78), Expect = 0.82
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
 Frame = +3

Query: 264 PPHPGHGAPPPLAPH----VVAVPPPWHQLPQQQQHQAPPTVQHQPLQLP 401
           PP P H  PPP+A      V + PPP H  P      +PP    + + LP
Sbjct: 644 PPPPVHSPPPPVASPPPALVFSPPPPVHSPPPPAPVMSPPPPTFEDVALP 693

>sp|P20730|CHHC_BOMMO Chorion class high-cysteine HCB protein 13 precursor (HC-B.13)
           gi|84797|pir||A23219 high-cysteine chorion protein B 13
           - silkworm
          Length = 178

 Score = 57.8 bits (138), Expect = 9e-08
 Identities = 36/90 (40%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
 Frame = -1

Query: 529 CAGGCGC--RGARASICGGRTSEGAAKAGPGWW*GC-CGAG*GTGCGNCSGWCCTVGGAW 359
           C+ GCGC   G      G   S G    G G   GC CG   G GCG C G  C  G   
Sbjct: 89  CSSGCGCIDYGCGDGCVGITQSCGGCGCGCGGCGGCGCGGCGGCGCGGCGGCGCCGGCGG 148

Query: 358 CCCCCGSWCQGGGTATTCGASGGGAP*PGC 269
           C C CG  C G G    CG  G G    GC
Sbjct: 149 CGCGCGG-CGGCGCCGGCGGCGCGCGGCGC 177

 Score = 52.0 bits (123), Expect = 5e-06
 Identities = 35/84 (41%), Positives = 37/84 (43%), Gaps = 1/84 (1%)
 Frame = -1

Query: 535 KACAG-GCGCRGARASICGGRTSEGAAKAGPGWW*GCCGAG*GTGCGNCSGWCCTVGGAW 359
           ++C G GCGC G     CGG    G    G G   GC G G    CG C G  C  GG  
Sbjct: 109 QSCGGCGCGCGG-----CGGCGCGGCGGCGCG---GCGGCG---CCGGCGGCGCGCGGCG 157

Query: 358 CCCCCGSWCQGGGTATTCGASGGG 287
            C CCG  C G G    CG  G G
Sbjct: 158 GCGCCGG-CGGCG----CGCGGCG 176

 Score = 50.4 bits (119), Expect = 1e-05
 Identities = 35/90 (38%), Positives = 36/90 (39%), Gaps = 12/90 (13%)
 Frame = -1

Query: 496 ASICGGRTSEGAAKAGPGWW*GC---------CGAG*GTGCGNCS-GWC--CTVGGAWCC 353
           A +CG   S G      G   GC         CG G G GCG C  G C  C  GG   C
Sbjct: 82  ADVCGDMCSSGCGCIDYGCGDGCVGITQSCGGCGCGCG-GCGGCGCGGCGGCGCGGCGGC 140

Query: 352 CCCGSWCQGGGTATTCGASGGGAP*PGCGG 263
            CCG     GG    CG  GG     GCGG
Sbjct: 141 GCCGGC---GGCGCGCGGCGGCGCCGGCGG 167

 Score = 48.1 bits (113), Expect = 7e-05
 Identities = 24/57 (42%), Positives = 24/57 (42%)
 Frame = -1

Query: 523 GGCGCRGARASICGGRTSEGAAKAGPGWW*GCCGAG*GTGCGNCSGWCCTVGGAWCC 353
           GGCGC G     CGG    G      G   GC G G    CG C G  C  GG  CC
Sbjct: 122 GGCGCGGCGGCGCGGCGGCGCCGGCGGCGCGCGGCGGCGCCGGCGGCGCGCGGCGCC 178

 Score = 35.8 bits (81), Expect = 0.37
 Identities = 28/80 (35%), Positives = 30/80 (37%), Gaps = 24/80 (30%)
 Frame = -1

Query: 433 GCCGAG*GTGCGNCSGWCCTVGGAWCCC----------CC------GSWCQGG-----GT 317
           GCC  G G GCG C   CC     +C C           C      G  C  G     GT
Sbjct: 25  GCCCRGCGCGCGGCGSRCC---DRFCLCSNSAAPTGLSICSENRYNGDVCVCGEVPFLGT 81

Query: 316 ATTCG---ASGGGAP*PGCG 266
           A  CG   +SG G    GCG
Sbjct: 82  ADVCGDMCSSGCGCIDYGCG 101



EST assemble image


clone accession position
1 LCL044c05_r AV628594 1 303
2 LCL077b12_r AV630319 4 538




Chlamydomonas reinhardtii
Kazusa DNA Research Institute