Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003205A_C01 KCC003205A_c01
(622 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB28654.1| unnamed protein product [Mus musculus] 167 9e-41
dbj|BAB31946.1| unnamed protein product [Mus musculus] 167 9e-41
ref|XP_342838.1| similar to SMC2 protein [Rattus norvegicus] 167 9e-41
ref|NP_201047.1| chromosomal protein - like [Arabidopsis thaliana] 167 1e-40
gb|AAG53093.1|AF306547_1 SMC2-1 [Arabidopsis thaliana] 167 1e-40
>dbj|BAB28654.1| unnamed protein product [Mus musculus]
Length = 270
Score = 167 bits (424), Expect = 9e-41
Identities = 82/127 (64%), Positives = 96/127 (75%)
Frame = +3
Query: 240 MYIQQLDIDGFKSYANHVTLNNFDRSFNAITGLNGSGKSNILDSICFVLGIKKLEQVRAQ 419
MY++ + ++GFKSYA +N FD FNAITGLNGSGKSNILDSICF+LGI L QVRA
Sbjct: 1 MYVKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60
Query: 420 NLQELVYKQGQAGIQRASVSITFRNDDPKTGPSGYEDKETIVVTRQIAVGGRNKYTINGQ 599
NLQ+LVYK GQAGI +ASVSITF N D K P G+E + I VTRQ+ +GGRNKY ING
Sbjct: 61 NLQDLVYKNGQAGITKASVSITFDNSDKKQSPLGFEAHDEITVTRQVVIGGRNKYLINGV 120
Query: 600 AATESRV 620
A +RV
Sbjct: 121 NANNTRV 127
>dbj|BAB31946.1| unnamed protein product [Mus musculus]
Length = 284
Score = 167 bits (424), Expect = 9e-41
Identities = 82/127 (64%), Positives = 96/127 (75%)
Frame = +3
Query: 240 MYIQQLDIDGFKSYANHVTLNNFDRSFNAITGLNGSGKSNILDSICFVLGIKKLEQVRAQ 419
MY++ + ++GFKSYA +N FD FNAITGLNGSGKSNILDSICF+LGI L QVRA
Sbjct: 1 MYVKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60
Query: 420 NLQELVYKQGQAGIQRASVSITFRNDDPKTGPSGYEDKETIVVTRQIAVGGRNKYTINGQ 599
NLQ+LVYK GQAGI +ASVSITF N D K P G+E + I VTRQ+ +GGRNKY ING
Sbjct: 61 NLQDLVYKNGQAGITKASVSITFDNSDKKQSPLGFEAHDEITVTRQVVIGGRNKYLINGV 120
Query: 600 AATESRV 620
A +RV
Sbjct: 121 NANNTRV 127
>ref|XP_342838.1| similar to SMC2 protein [Rattus norvegicus]
Length = 1191
Score = 167 bits (424), Expect = 9e-41
Identities = 82/127 (64%), Positives = 96/127 (75%)
Frame = +3
Query: 240 MYIQQLDIDGFKSYANHVTLNNFDRSFNAITGLNGSGKSNILDSICFVLGIKKLEQVRAQ 419
MY++ + ++GFKSYA +N FD FNAITGLNGSGKSNILDSICF+LGI L QVRA
Sbjct: 1 MYVKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60
Query: 420 NLQELVYKQGQAGIQRASVSITFRNDDPKTGPSGYEDKETIVVTRQIAVGGRNKYTINGQ 599
NLQ+LVYK GQAGI +ASVSITF N D K P G+E + I VTRQ+ +GGRNKY ING
Sbjct: 61 NLQDLVYKNGQAGITKASVSITFDNSDKKQSPLGFEAHDEITVTRQVVIGGRNKYLINGV 120
Query: 600 AATESRV 620
A +RV
Sbjct: 121 NANNTRV 127
>ref|NP_201047.1| chromosomal protein - like [Arabidopsis thaliana]
Length = 1175
Score = 167 bits (423), Expect = 1e-40
Identities = 83/127 (65%), Positives = 99/127 (77%)
Frame = +3
Query: 240 MYIQQLDIDGFKSYANHVTLNNFDRSFNAITGLNGSGKSNILDSICFVLGIKKLEQVRAQ 419
M+I+++ ++GFKSYA ++ FD FNAITGLNGSGKSNILDSICFVLGI L+QVRA
Sbjct: 1 MHIKEICLEGFKSYATRTVVSGFDPHFNAITGLNGSGKSNILDSICFVLGITNLQQVRAA 60
Query: 420 NLQELVYKQGQAGIQRASVSITFRNDDPKTGPSGYEDKETIVVTRQIAVGGRNKYTINGQ 599
NLQELVYKQGQAGI +A+VS+TF N + P GYE+ I VTRQI VGGRNKY ING+
Sbjct: 61 NLQELVYKQGQAGITKATVSVTFDNSERHRSPLGYEEHPEITVTRQIVVGGRNKYLINGK 120
Query: 600 AATESRV 620
A S+V
Sbjct: 121 LAQPSQV 127
>gb|AAG53093.1|AF306547_1 SMC2-1 [Arabidopsis thaliana]
Length = 1175
Score = 167 bits (423), Expect = 1e-40
Identities = 83/127 (65%), Positives = 99/127 (77%)
Frame = +3
Query: 240 MYIQQLDIDGFKSYANHVTLNNFDRSFNAITGLNGSGKSNILDSICFVLGIKKLEQVRAQ 419
M+I+++ ++GFKSYA ++ FD FNAITGLNGSGKSNILDSICFVLGI L+QVRA
Sbjct: 1 MHIKEICLEGFKSYATRTVVSGFDPHFNAITGLNGSGKSNILDSICFVLGITNLQQVRAA 60
Query: 420 NLQELVYKQGQAGIQRASVSITFRNDDPKTGPSGYEDKETIVVTRQIAVGGRNKYTINGQ 599
NLQELVYKQGQAGI +A+VS+TF N + P GYE+ I VTRQI VGGRNKY ING+
Sbjct: 61 NLQELVYKQGQAGITKATVSVTFDNSERHRSPLGYEEHPEITVTRQIVVGGRNKYLINGK 120
Query: 600 AATESRV 620
A S+V
Sbjct: 121 LAQPSQV 127
