Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003200A_C01 KCC003200A_c01
(472 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC28769.2| related to VACUOLAR PROTEIN SORTING-ASSOCIATED P... 33 1.3
ref|XP_323477.1| hypothetical protein ( (AL513463) related to VA... 33 1.3
ref|NP_827559.1| putative secreted lyase [Streptomyces avermitil... 32 3.7
ref|NP_446074.1| nuclear pore membrane glycoprotein 121 kD [Ratt... 32 4.9
ref|NP_629446.1| putative sensor-like histidine kinase [Streptom... 31 6.3
>emb|CAC28769.2| related to VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS5
[Neurospora crassa]
Length = 580
Score = 33.5 bits (75), Expect = 1.3
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Frame = -1
Query: 460 LGGPGSETPW----PTAPSQEPTQSS-PLQYKFAGV*KKIGLGLESRNGGPGVASRLREA 296
LG G+ TP P AP Q P + PL+ +G +IG G GGP R+ E
Sbjct: 76 LGPLGASTPTATDTPLAPPQPPLKEQLPLRTTLSGGPNQIGSGARRPGGGPSDPHRIEEE 135
Query: 295 RLLSAPDAG 269
L + +G
Sbjct: 136 ELYNDSSSG 144
>ref|XP_323477.1| hypothetical protein ( (AL513463) related to VACUOLAR PROTEIN
SORTING-ASSOCIATED PROTEIN VPS5 [Neurospora crassa] )
gi|28922836|gb|EAA32057.1| hypothetical protein (
(AL513463) related to VACUOLAR PROTEIN
SORTING-ASSOCIATED PROTEIN VPS5 [Neurospora crassa] )
Length = 606
Score = 33.5 bits (75), Expect = 1.3
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Frame = -1
Query: 460 LGGPGSETPW----PTAPSQEPTQSS-PLQYKFAGV*KKIGLGLESRNGGPGVASRLREA 296
LG G+ TP P AP Q P + PL+ +G +IG G GGP R+ E
Sbjct: 76 LGPLGASTPTATDTPLAPPQPPLKEQLPLRTTLSGGPNQIGSGARRPGGGPSDPHRIEEE 135
Query: 295 RLLSAPDAG 269
L + +G
Sbjct: 136 ELYNDSSSG 144
>ref|NP_827559.1| putative secreted lyase [Streptomyces avermitilis MA-4680]
gi|29610046|dbj|BAC74094.1| putative secreted lyase
[Streptomyces avermitilis MA-4680]
Length = 276
Score = 32.0 bits (71), Expect = 3.7
Identities = 25/94 (26%), Positives = 36/94 (37%), Gaps = 5/94 (5%)
Frame = -1
Query: 466 SLLGGPGSETPWPTAPSQEPTQSS-PLQYKFAGV*KKIG----LGLESRNGGPGVASRLR 302
SLL G+ T WP A + S+ + + G KK LG ++ G L
Sbjct: 39 SLLSSAGAATSWPEATGSKAVSSTIEVSGTYDGKLKKFSGSGDLGTADQSEDQGPLFELE 98
Query: 301 EARLLSAPDAGKMLLDCPSCLCYCTYTRLWLMKV 200
+ +L G D CL CT +W + V
Sbjct: 99 DGAVLKNVIIGTPAADGVHCLGSCTLQNVWWLDV 132
>ref|NP_446074.1| nuclear pore membrane glycoprotein 121 kD [Rattus norvegicus]
gi|1709213|sp|P52591|P121_RAT Nuclear envelope pore
membrane protein POM 121 (Pore membrane protein of 121
kDa) (P145) gi|539993|pir||A40670 nuclear envelope
protein POM 121 - rat gi|396747|emb|CAA79725.1| integral
membrane glycoprotein [Rattus norvegicus]
Length = 1199
Score = 31.6 bits (70), Expect = 4.9
Identities = 21/38 (55%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +3
Query: 270 PAS---GALSKRASRSLLATPGPPLRDSRPKPIFF*TP 374
PAS G LS AS S LATPGP KPIF TP
Sbjct: 671 PASTLFGMLSPPASSSSLATPGPACASPMFKPIFPATP 708
>ref|NP_629446.1| putative sensor-like histidine kinase [Streptomyces coelicolor
A3(2)] gi|7481383|pir||T35625 probable sensor-like
histidine kinase - Streptomyces coelicolor
gi|5139602|emb|CAB45620.1| putative sensor-like
histidine kinase [Streptomyces coelicolor A3(2)]
Length = 414
Score = 31.2 bits (69), Expect = 6.3
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 224 ISAIAQAAGAVQQHFAGVWCAEQASFAKPARNARTPVTGLQT*ADLL 364
++++A A ++ G AEQ A A RTP+TGL A+LL
Sbjct: 197 VASVAAALDSMASSLQGKLLAEQRFTADVAHELRTPLTGLHAAAELL 243
