Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003197A_C01 KCC003197A_c01
(429 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00055953.1| COG0079: Histidinol-phosphate/aromatic aminot... 48 3e-05
ref|XP_325653.1| predicted protein [Neurospora crassa] gi|289215... 48 3e-05
ref|ZP_00137697.1| COG0147: Anthranilate/para-aminobenzoate synt... 47 5e-05
gb|AAH36187.1| SRRM1 protein [Homo sapiens] 47 6e-05
ref|NP_005830.1| Ser/Arg-related nuclear matrix protein (plenty ... 47 6e-05
>ref|ZP_00055953.1| COG0079: Histidinol-phosphate/aromatic aminotransferase and cobyric
acid decarboxylase [Magnetospirillum magnetotacticum]
Length = 511
Score = 48.1 bits (113), Expect = 3e-05
Identities = 42/131 (32%), Positives = 49/131 (37%), Gaps = 7/131 (5%)
Frame = +2
Query: 2 GALRGAARGDVGVWAVAALRRQEGAGDAGHGHQ-------RARARGGRGAARARARPRPV 160
G R AARG + G +G GH+ R R G R R +PRP
Sbjct: 8 GKRRCAARGGPPALRPHPAGQGRGGAPSGPGHRVPRPRRIRRRPHPGGAGDRPRCQPRPP 67
Query: 161 AQASGRCGRGAGGQRSQQHEDHWRGVGARRHARHQQRRDR*PAGPHERRQRERAGRRQRH 340
A+ SG GRG G +R+ H WR V A R R PAG Q R R
Sbjct: 68 ARHSG--GRGTGARRTAGHPPSWRPVAAHGGDSGPCDRRRSPAGRPGGAQGSRRPHRGDR 125
Query: 341 GWLHGLGAERA 373
H A A
Sbjct: 126 RLCHPFRARNA 136
>ref|XP_325653.1| predicted protein [Neurospora crassa] gi|28921517|gb|EAA30822.1|
predicted protein [Neurospora crassa]
Length = 685
Score = 48.1 bits (113), Expect = 3e-05
Identities = 44/143 (30%), Positives = 59/143 (40%), Gaps = 6/143 (4%)
Frame = +2
Query: 2 GALRGAARGDVGVWAV----AALRRQEGAGDAGHGHQRARARGGRGAARARARPRPVAQA 169
G RGA+R V A RR G D +R GGR + R A
Sbjct: 321 GGNRGASRDGRTVRVTEPRRTATRRHRGERDGERSERRREGSGGRSRSG-----RSGTGA 375
Query: 170 SGRCGRGAGGQRSQQHEDHWRGV--GARRHARHQQRRDR*PAGPHERRQRERAGRRQRHG 343
G G+ G RS++ DH R G RHAR ++RR RR+++++ +RH
Sbjct: 376 GAGSGHGSRGHRSRR--DHGRSTTSGRHRHARDEERR--------RRRRKKKSSSSRRHE 425
Query: 344 WLHGLGAERAARGQAGG*GLDGR 412
R+AR A G G GR
Sbjct: 426 GSGSGSHSRSARTTAAGGGHSGR 448
>ref|ZP_00137697.1| COG0147: Anthranilate/para-aminobenzoate synthases component I
[Pseudomonas aeruginosa UCBPP-PA14]
Length = 769
Score = 47.4 bits (111), Expect = 5e-05
Identities = 50/142 (35%), Positives = 54/142 (37%), Gaps = 30/142 (21%)
Frame = +2
Query: 8 LRGAARGD-----VGVWAVAALRRQEGAGDAGHGHQRARARGGRGA-------------- 130
+R A R D G A R +G AGH Q R RGGRGA
Sbjct: 1 MRRAGRADRLHRPAGQHDRGAARPAQGLLGAGHARQSGRPRGGRGAGAGAGRLAADQVAL 60
Query: 131 ----------ARARARPRPV-AQASGRCGRGAGGQRSQQHEDHWRGVGARRHARHQQRRD 277
A AR RPRPV A R RGA + + H G RRH R Q R
Sbjct: 61 QRLLPLRPAPADARRRPRPVGAVRRIRPRRGADLHGRRLLQRHPAVPGGRRHRRLQ--RG 118
Query: 278 R*PAGPHERRQRERAGRRQRHG 343
P GP RRQ R G R G
Sbjct: 119 APPHGPGIRRQPLRDGGHHRRG 140
>gb|AAH36187.1| SRRM1 protein [Homo sapiens]
Length = 904
Score = 47.0 bits (110), Expect = 6e-05
Identities = 43/138 (31%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Frame = -1
Query: 411 RPSSP*PPACPRAARSAPSPCSHPCRWRLPARSRCRRS*GPAGQRSRRC*CRA*RRAPTP 232
R SP PP P R +PSP P R R P RR+ P +R R+P+P
Sbjct: 546 RRRSPSPP--PTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRR----------RSPSP 593
Query: 231 RQWSSCCWLRCPPAPLPQRPLA*ATGRGRARARAAPRPPRARAR*WPCPA-----SPAPS 67
R++S R P+P P+R R + P PP+ RA P P SP P
Sbjct: 594 RRYSPPIQRRYSPSPPPKR-----------RTASPPPPPKRRASPSPPPKRRVSHSPPPK 642
Query: 66 WRLRAATAQTPTSPRAAP 13
R +P + R +P
Sbjct: 643 QR------SSPVTKRRSP 654
Score = 37.4 bits (85), Expect = 0.048
Identities = 40/123 (32%), Positives = 49/123 (39%)
Frame = -1
Query: 429 RHRHQTRPSSP*PPACPRAARSAPSPCSHPCRWRLPARSRCRRS*GPAGQRSRRC*CRA* 250
R RH++R S P P + R PSP R+P R RRS P +R R
Sbjct: 299 RRRHRSRSRSYSPRRRP-SPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSS----- 352
Query: 249 RRAPTPRQWSSCCWLRCPPAPLPQRPLA*ATGRGRARARAAPRPPRARAR*WPCPASPAP 70
SS R PP P+R + R R + PPR R R P PA+P P
Sbjct: 353 ASLSGSSSSSSSSRSRSPPKKPPKRTS--SPPRKTRRLSPSASPPRRRHRPSP-PATPPP 409
Query: 69 SWR 61
R
Sbjct: 410 KTR 412
Score = 34.3 bits (77), Expect = 0.41
Identities = 43/144 (29%), Positives = 55/144 (37%), Gaps = 1/144 (0%)
Frame = -1
Query: 429 RHRHQ-TRPSSP*PPACPRAARSAPSPCSHPCRWRLPARSRCRRS*GPAGQRSRRC*CRA 253
R RH +R +SP PR + SP R P +R RRS PA RR
Sbjct: 520 RRRHSPSRSASP----SPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRR----- 570
Query: 252 *RRAPTPRQWSSCCWLRCPPAPLPQRPLA*ATGRGRARARAAPRPPRARAR*WPCPASPA 73
R PTP R P+P P+R R+ + PP R SP+
Sbjct: 571 --RTPTPPP------RRRTPSPPPRR---------RSPSPRRYSPPIQRRY------SPS 607
Query: 72 PSWRLRAATAQTPTSPRAAPRSAP 1
P + R A+ P RA+P P
Sbjct: 608 PPPKRRTASPPPPPKRRASPSPPP 631
Score = 31.2 bits (69), Expect = 3.5
Identities = 32/107 (29%), Positives = 41/107 (37%), Gaps = 2/107 (1%)
Frame = -1
Query: 324 PARSRCRRS*GPAGQRSRRC*CRA*RRAPTPRQ--WSSCCWLRCPPAPLPQRPLA*ATGR 151
P RS + G G+R R R+ +P RQ S R P+P P R +
Sbjct: 507 PKRSHVKN--GEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPA 564
Query: 150 GRARARAAPRPPRARAR*WPCPASPAPSWRLRAATAQTPTSPRAAPR 10
R R P PP R P P +PS R + Q SP P+
Sbjct: 565 PPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPK 611
Score = 30.0 bits (66), Expect = 7.7
Identities = 31/79 (39%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Frame = +1
Query: 1 RSASRSSSR---RCRSLGGCGPQTPRRSR------RCRAWPSTRACTRWAWCGTCAR--P 147
RS SRS SR R RS P+ RSR R R P R R T R P
Sbjct: 277 RSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRR---TPPRRMP 333
Query: 148 PPPRRSGQRALWQRRRRTA 204
PPPR R+ +RRRR++
Sbjct: 334 PPPRHRRSRSPVRRRRRSS 352
>ref|NP_005830.1| Ser/Arg-related nuclear matrix protein (plenty of prolines 101-l;
Ser/Arg-related nuclear matrix protein (plenty of
prolines 101-like) [Homo sapiens]
gi|3005587|gb|AAC09321.1| Ser/Arg-related nuclear matrix
protein [Homo sapiens]
gi|33150824|gb|AAP97290.1|AF419855_1 Ser/Arg-related
nuclear matrix protein [Homo sapiens]
Length = 820
Score = 47.0 bits (110), Expect = 6e-05
Identities = 43/138 (31%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Frame = -1
Query: 411 RPSSP*PPACPRAARSAPSPCSHPCRWRLPARSRCRRS*GPAGQRSRRC*CRA*RRAPTP 232
R SP PP P R +PSP P R R P RR+ P +R R+P+P
Sbjct: 544 RRRSPSPP--PTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRR----------RSPSP 591
Query: 231 RQWSSCCWLRCPPAPLPQRPLA*ATGRGRARARAAPRPPRARAR*WPCPA-----SPAPS 67
R++S R P+P P+R R + P PP+ RA P P SP P
Sbjct: 592 RRYSPPIQRRYSPSPPPKR-----------RTASPPPPPKRRASPSPPPKRRVSHSPPPK 640
Query: 66 WRLRAATAQTPTSPRAAP 13
R +P + R +P
Sbjct: 641 QR------SSPVTKRRSP 652
Score = 34.3 bits (77), Expect = 0.41
Identities = 43/144 (29%), Positives = 55/144 (37%), Gaps = 1/144 (0%)
Frame = -1
Query: 429 RHRHQ-TRPSSP*PPACPRAARSAPSPCSHPCRWRLPARSRCRRS*GPAGQRSRRC*CRA 253
R RH +R +SP PR + SP R P +R RRS PA RR
Sbjct: 518 RRRHSPSRSASP----SPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRR----- 568
Query: 252 *RRAPTPRQWSSCCWLRCPPAPLPQRPLA*ATGRGRARARAAPRPPRARAR*WPCPASPA 73
R PTP R P+P P+R R+ + PP R SP+
Sbjct: 569 --RTPTPPP------RRRTPSPPPRR---------RSPSPRRYSPPIQRRY------SPS 605
Query: 72 PSWRLRAATAQTPTSPRAAPRSAP 1
P + R A+ P RA+P P
Sbjct: 606 PPPKRRTASPPPPPKRRASPSPPP 629
Score = 31.2 bits (69), Expect = 3.5
Identities = 32/107 (29%), Positives = 41/107 (37%), Gaps = 2/107 (1%)
Frame = -1
Query: 324 PARSRCRRS*GPAGQRSRRC*CRA*RRAPTPRQ--WSSCCWLRCPPAPLPQRPLA*ATGR 151
P RS + G G+R R R+ +P RQ S R P+P P R +
Sbjct: 505 PKRSHVKN--GEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPA 562
Query: 150 GRARARAAPRPPRARAR*WPCPASPAPSWRLRAATAQTPTSPRAAPR 10
R R P PP R P P +PS R + Q SP P+
Sbjct: 563 PPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPK 609
Score = 30.0 bits (66), Expect = 7.7
Identities = 29/80 (36%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Frame = +1
Query: 1 RSASRSSSR---RCRSLGGCGPQ---------TPRRSRRCRAWPSTRACTRWAWCGTCAR 144
RS SRS SR R RS P+ +PRR R PS R T
Sbjct: 277 RSRSRSKSRSRTRSRSPSHTRPRRRHRSDKMYSPRRRPSPRRRPSPRRRTP-----PRRM 331
Query: 145 PPPPRRSGQRALWQRRRRTA 204
PPPPR R+ +RRRR++
Sbjct: 332 PPPPRHRRSRSPVRRRRRSS 351
