Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003196A_C01 KCC003196A_c01
(621 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_189520.1| glycine-rich protein [Arabidopsis thaliana] gi|... 58 1e-07
pir||T31611 hypothetical protein Y50E8A.g - Caenorhabditis elegans 57 2e-07
ref|NP_217861.1| PE_PGRS [Mycobacterium tuberculosis H37Rv] gi|7... 52 2e-07
pir||A53662 homeotic protein HB9 - human 57 3e-07
gb|AAD41467.1| homeotic protein HB9 [Homo sapiens] 56 5e-07
>ref|NP_189520.1| glycine-rich protein [Arabidopsis thaliana]
gi|11994785|dbj|BAB03175.1| gene_id:T19N8.7~unknown
protein [Arabidopsis thaliana]
Length = 614
Score = 58.2 bits (139), Expect = 1e-07
Identities = 47/147 (31%), Positives = 60/147 (39%), Gaps = 4/147 (2%)
Frame = +3
Query: 42 AAVGAGLRRAMSAMPRNRHLRAAAATLDELTASSAALLAAGGHVWGGGSTGGRQSSGSLS 221
AA GAG SA AA+ E SA+ AA G G TGG SG +
Sbjct: 286 AASGAGAASGASAKTGGESGEAASGGSAETGGESASAGAASG---GSAETGGESGSGGAA 342
Query: 222 DAGPQPNPGSC----PHYPHRLPTGSNGAGSGGGTGGDAADGPSRRAHSFSSVLSAFGAA 389
G + G+ P TG A G +GG++A G + + S S + GA
Sbjct: 343 SGGESASGGATSGGSPETGGSAETGGESASGGAASGGESASGGAASSGSVESGGESTGAT 402
Query: 390 SADCPEGAVGVAGGGGAGGGVQDVSGG 470
S E + A GG A GG + SGG
Sbjct: 403 SGGSAETSDESASGGAASGG-ESASGG 428
Score = 48.1 bits (113), Expect = 1e-04
Identities = 36/109 (33%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Frame = +3
Query: 156 AAGGHVWGGGS-TGGRQSSGSLSDAGPQPNPGSCPHYPHRLPTGSNGAGSGGGT---GGD 323
A+GG GG S +GG S GS G + G + S GA SGG T GG
Sbjct: 414 ASGGAASGGESASGGAASGGSAETGGESTSSGVASGGSTGSESASAGAASGGSTEANGGA 473
Query: 324 AADGPSRRAHSFSSVLSAFGAASADCPEGAVGVAGGGGAGGGVQDVSGG 470
AA G + S+ S+ G SA + +GG A GG + + G
Sbjct: 474 AAGGSTEAGSGTSTETSSMGGGSAAAGGVSESSSGGSTAAGGTSESASG 522
Score = 42.7 bits (99), Expect = 0.004
Identities = 38/128 (29%), Positives = 51/128 (39%), Gaps = 7/128 (5%)
Frame = +3
Query: 108 AAATLDELTASSAALLAAGGHVWGG-------GSTGGRQSSGSLSDAGPQPNPGSCPHYP 266
+AAT D A+ A A G GG G+ G +SG + A + GS
Sbjct: 222 SAATADSGDAAGADSGGAAGADSGGAASADSGGAAAGETASGGAAAA--DTSGGSAE--- 276
Query: 267 HRLPTGSNGAGSGGGTGGDAADGPSRRAHSFSSVLSAFGAASADCPEGAVGVAGGGGAGG 446
TG A G +G AA G S + S ++ G+A + G A GG A
Sbjct: 277 ----TGGESASGGAASGAGAASGASAKTGGESGEAASGGSAETGGESASAGAASGGSAET 332
Query: 447 GVQDVSGG 470
G + SGG
Sbjct: 333 GGESGSGG 340
Score = 42.7 bits (99), Expect = 0.004
Identities = 32/109 (29%), Positives = 46/109 (41%), Gaps = 4/109 (3%)
Frame = +3
Query: 156 AAGGHVWGGGSTGGRQSSGSLSDAGPQPNPGSCPHYPHRLPTGSNGAGSGGG----TGGD 323
AA G GG+ S GS G + G+ ++GAG+ G TGG+
Sbjct: 255 AAAGETASGGAAAADTSGGSAETGGESASGGA-----------ASGAGAASGASAKTGGE 303
Query: 324 AADGPSRRAHSFSSVLSAFGAASADCPEGAVGVAGGGGAGGGVQDVSGG 470
+ + S + ++ GAAS E G +G GGA G + SGG
Sbjct: 304 SGEAASGGSAETGGESASAGAASGGSAETG-GESGSGGAASGGESASGG 351
Score = 38.9 bits (89), Expect = 0.061
Identities = 40/136 (29%), Positives = 51/136 (37%), Gaps = 15/136 (11%)
Frame = +3
Query: 108 AAATLDELTASSAALLAAGGHVWGGGSTGGRQSS--------GSLSDA-GPQPNPGSCPH 260
A L L ++ L + G GS G S+ GS D G + P
Sbjct: 119 AKIDLSSLLGGGSSGLGSSGDSGSPGSDSGSPSADTGSPTDGGSYGDTTGDSGSSAGSPS 178
Query: 261 YPHRLPTGSNGAGSGGGTGGDAADGPSRRAHSFSSVLSAF---GAASADCPEGA---VGV 422
YP +GS G G T +A G S SS +A AA+AD + A G
Sbjct: 179 YPSDDGSGSTAGGPSGSTTDGSAGGESSMGGDSSSAGAAGESGSAATADSGDAAGADSGG 238
Query: 423 AGGGGAGGGVQDVSGG 470
A G +GG SGG
Sbjct: 239 AAGADSGGAASADSGG 254
Score = 32.3 bits (72), Expect = 5.7
Identities = 44/156 (28%), Positives = 53/156 (33%), Gaps = 2/156 (1%)
Frame = +3
Query: 15 SPAAVPSTRAAVGAGLRRAMSAMPRNRHLRAAAATLDELTASSAALLAAGG--HVWGGGS 188
S + ++ A G A A + T E ++ AAGG GGS
Sbjct: 451 STGSESASAGAASGGSTEANGGAAAGGSTEAGSGTSTETSSMGGGSAAAGGVSESSSGGS 510
Query: 189 TGGRQSSGSLSDAGPQPNPGSCPHYPHRLPTGSNGAGSGGGTGGDAADGPSRRAHSFSSV 368
T +S S S S Y T S G G TG +A GPS
Sbjct: 511 TAAGGTSESASGGSATAGGASGGTY-----TDSTG---GSPTGSPSAGGPS--------- 553
Query: 369 LSAFGAASADCPEGAVGVAGGGGAGGGVQDVSGGYQ 476
G+AS EG G GG GG Q S YQ
Sbjct: 554 ----GSASESSMEG--GTFGGQSMGG--QAGSASYQ 581
>pir||T31611 hypothetical protein Y50E8A.g - Caenorhabditis elegans
Length = 1585
Score = 57.4 bits (137), Expect = 2e-07
Identities = 46/130 (35%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Frame = +3
Query: 105 AAAATLDELTASSAALLAAGGHVWGGGSTGGRQSSGSLSDAGPQPNPGSCPHYPHRLPTG 284
A A + + S+ AAGG GGGS+GG + GS + P P P P P P
Sbjct: 1346 APAPSSGGYSGGSSGGSAAGG---GGGSSGG-YTGGSAAPPPPPPPPPPPPPAPAPAPAP 1401
Query: 285 SNGAGSGGGTGGDAADGPSRRAHSFSSVLS-------AFGAASADCPEGAVGVAGGGGAG 443
S+G SGG +GG AA G + +S + A A A G G + GG A
Sbjct: 1402 SSGGYSGGSSGGSAAGGGGGSSGGYSGGSAAPPPPPPAPAPAPAPSSGGYSGGSSGGSAA 1461
Query: 444 GGVQDVSGGY 473
GG SGGY
Sbjct: 1462 GGGGGSSGGY 1471
Score = 57.0 bits (136), Expect = 2e-07
Identities = 47/134 (35%), Positives = 58/134 (43%), Gaps = 11/134 (8%)
Frame = +3
Query: 105 AAAATLDELTASSAALLAAGGHVWGGGSTGGRQSSGSLSDAGPQPNPGSCPHYPHRLPTG 284
A A + + S+ AAGG GGGS+GG S GS + P P P P P P
Sbjct: 1040 APAPSSGGYSGGSSGGSAAGG---GGGSSGG-YSGGSTAPPPPPPPPPPPPPAPAPAPAP 1095
Query: 285 SNGAGSGGGTGGDAADGPSRRAHSFSSVLS-----------AFGAASADCPEGAVGVAGG 431
S+G SGG +GG AA G + +S + A A A G G + G
Sbjct: 1096 SSGGYSGGSSGGSAAGGGGGSSGGYSGGSAAPPPPPPPPPPAPAPAPAPSSGGYSGGSSG 1155
Query: 432 GGAGGGVQDVSGGY 473
G A GG SGGY
Sbjct: 1156 GSAAGGGGGSSGGY 1169
Score = 55.1 bits (131), Expect = 8e-07
Identities = 46/136 (33%), Positives = 58/136 (41%), Gaps = 13/136 (9%)
Frame = +3
Query: 105 AAAATLDELTASSAALLAAGGHVWGGGSTGGRQSSGSLSDAGPQPNPGSCPHYPHRLPTG 284
A A + + S+ AAGG GGGS+GG + GS + P P P P P P
Sbjct: 1243 APAPSSGGYSGGSSGGSAAGG---GGGSSGG-YTGGSAAPPPPPPPPPPPPPAPAPAPAP 1298
Query: 285 SNGAGSGGGTGGDAADGPSRRAHSFSSVLS-------------AFGAASADCPEGAVGVA 425
S+G SGG +GG AA G + +S + A A A G G +
Sbjct: 1299 SSGGYSGGSSGGSAAGGGGGSSGGYSGGSAAPPPPPPPPPPPPAPAPAPAPSSGGYSGGS 1358
Query: 426 GGGGAGGGVQDVSGGY 473
GG A GG SGGY
Sbjct: 1359 SGGSAAGGGGGSSGGY 1374
Score = 53.9 bits (128), Expect = 2e-06
Identities = 48/136 (35%), Positives = 58/136 (42%), Gaps = 13/136 (9%)
Frame = +3
Query: 105 AAAATLDELTASSAALLAAGGHVWGGGSTGGRQSSGSLSDAGPQPNPGSCPHYPHRLPTG 284
A A + + S+ AAGG GGGS+GG S GS A P P P P P P
Sbjct: 1092 APAPSSGGYSGGSSGGSAAGG---GGGSSGG-YSGGS---AAPPPPPPPPPPAPAPAPAP 1144
Query: 285 SNGAGSGGGTGGDAADGPSRRAHSFSSVLS-------------AFGAASADCPEGAVGVA 425
S+G SGG +GG AA G + +S + A A A G G +
Sbjct: 1145 SSGGYSGGSSGGSAAGGGGGSSGGYSGGSAAPPPPPPPPPPPPAPAPAPAPSSGGYSGGS 1204
Query: 426 GGGGAGGGVQDVSGGY 473
GG A GG SGGY
Sbjct: 1205 SGGSAAGGGGGSSGGY 1220
Score = 53.5 bits (127), Expect = 2e-06
Identities = 45/137 (32%), Positives = 58/137 (41%), Gaps = 14/137 (10%)
Frame = +3
Query: 105 AAAATLDELTASSAALLAAGGHVWGGGSTGGRQSSGSLSDAGPQPNPGSCPHYPHRLPTG 284
A A + + S+ AAGG GGGS+GG + GS + P P P P P P
Sbjct: 1443 APAPSSGGYSGGSSGGSAAGG---GGGSSGG-YTGGSAAPPPPPPPPPPPPPAPAPAPAP 1498
Query: 285 SNGAGSGGGTGGDAADGPSRRAHSFSSVLS--------------AFGAASADCPEGAVGV 422
S+G SGG +GG AA G + ++ + A A A G G
Sbjct: 1499 SSGGYSGGSSGGSAAGGGGGSSGGYTGGSAAPPPPPPPPPPPPPAPAPAPAPSSGGYSGG 1558
Query: 423 AGGGGAGGGVQDVSGGY 473
+ GG A GG SGGY
Sbjct: 1559 SSGGSAAGGGGGSSGGY 1575
Score = 53.5 bits (127), Expect = 2e-06
Identities = 48/137 (35%), Positives = 58/137 (42%), Gaps = 14/137 (10%)
Frame = +3
Query: 105 AAAATLDELTASSAALLAAGGHVWGGGSTGGRQSSGSLSDAGPQPNPGSCPHYPHRLPTG 284
A A + + S+ AAGG GGGS+GG S GS A P P P P P P
Sbjct: 991 APAPSSGGYSGGSSGGSAAGG---GGGSSGG-YSGGS---AAPPPPPPPPPPAPAPAPAP 1043
Query: 285 SNGAGSGGGTGGDAADGPSRRAHSFSSVLS--------------AFGAASADCPEGAVGV 422
S+G SGG +GG AA G + +S + A A A G G
Sbjct: 1044 SSGGYSGGSSGGSAAGGGGGSSGGYSGGSTAPPPPPPPPPPPPPAPAPAPAPSSGGYSGG 1103
Query: 423 AGGGGAGGGVQDVSGGY 473
+ GG A GG SGGY
Sbjct: 1104 SSGGSAAGGGGGSSGGY 1120
Score = 53.1 bits (126), Expect = 3e-06
Identities = 46/136 (33%), Positives = 57/136 (41%), Gaps = 13/136 (9%)
Frame = +3
Query: 105 AAAATLDELTASSAALLAAGGHVWGGGSTGGRQSSGSLSDAGPQPNPGSCPHYPHRLPTG 284
A A + + S+ AAGG GGGS+GG SG + P P P P P P
Sbjct: 1141 APAPSSGGYSGGSSGGSAAGG---GGGSSGGY--SGGSAAPPPPPPPPPPPPAPAPAPAP 1195
Query: 285 SNGAGSGGGTGGDAADGPSRRAHSFSSVLS-------------AFGAASADCPEGAVGVA 425
S+G SGG +GG AA G + +S + A A A G G +
Sbjct: 1196 SSGGYSGGSSGGSAAGGGGGSSGGYSGGSAAPPPPPPPPPPPPAPAPAPAPSSGGYSGGS 1255
Query: 426 GGGGAGGGVQDVSGGY 473
GG A GG SGGY
Sbjct: 1256 SGGSAAGGGGGSSGGY 1271
Score = 52.0 bits (123), Expect = 7e-06
Identities = 47/137 (34%), Positives = 59/137 (42%), Gaps = 14/137 (10%)
Frame = +3
Query: 105 AAAATLDELTASSAALLAAGGHVWGGGSTGGRQSSGSLSDAGPQPNPGSCPHYPHR---L 275
A A + + +S+ AAGG GGGS+GG S GS + P P P P P
Sbjct: 936 APAPSSGGYSGASSGGSAAGG---GGGSSGG-YSGGSAAPPPPPPPPPPPPPPPPAPAPA 991
Query: 276 PTGSNGAGSGGGTGGDAADGPSRRAHSFSSVLS-----------AFGAASADCPEGAVGV 422
P S+G SGG +GG AA G + +S + A A A G G
Sbjct: 992 PAPSSGGYSGGSSGGSAAGGGGGSSGGYSGGSAAPPPPPPPPPPAPAPAPAPSSGGYSGG 1051
Query: 423 AGGGGAGGGVQDVSGGY 473
+ GG A GG SGGY
Sbjct: 1052 SSGGSAAGGGGGSSGGY 1068
Score = 51.6 bits (122), Expect = 9e-06
Identities = 50/151 (33%), Positives = 59/151 (38%), Gaps = 18/151 (11%)
Frame = -3
Query: 505 SSGSAAGNTS**PPLTSCTPPPAPPPPATPTAPSGQS-----AEAAPKALNTLLKLCARR 341
SSG +G ++ PP PPP PPPPA AP+ S + A
Sbjct: 960 SSGGYSGGSAAPPPPPPPPPPPPPPPPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSGGY 1019
Query: 340 DGPSAASPPVPP-----PLPAPLLPVGNLWG--*WGQLPGLGCGPA------SLRLPELC 200
G SAA PP PP P PAP G G G G G G + S P
Sbjct: 1020 SGGSAAPPPPPPPPPPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSGGYSGGSTAPPPPP 1079
Query: 199 RPPVLPPPHTCPPAANSAAELAVSSSNVAAA 107
PP PPP P A S+ + SS +AA
Sbjct: 1080 PPPPPPPPAPAPAPAPSSGGYSGGSSGGSAA 1110
Score = 51.6 bits (122), Expect = 9e-06
Identities = 45/137 (32%), Positives = 57/137 (40%), Gaps = 14/137 (10%)
Frame = +3
Query: 105 AAAATLDELTASSAALLAAGGHVWGGGSTGGRQSSGSLSDAGPQPNPGSCPHYPHRLPTG 284
A A + + S+ AAGG GGGS+GG SG + P P P P P P
Sbjct: 1192 APAPSSGGYSGGSSGGSAAGG---GGGSSGG--YSGGSAAPPPPPPPPPPPPAPAPAPAP 1246
Query: 285 SNGAGSGGGTGGDAADGPSRRAHSFSSVLS--------------AFGAASADCPEGAVGV 422
S+G SGG +GG AA G + ++ + A A A G G
Sbjct: 1247 SSGGYSGGSSGGSAAGGGGGSSGGYTGGSAAPPPPPPPPPPPPPAPAPAPAPSSGGYSGG 1306
Query: 423 AGGGGAGGGVQDVSGGY 473
+ GG A GG SGGY
Sbjct: 1307 SSGGSAAGGGGGSSGGY 1323
Score = 51.6 bits (122), Expect = 9e-06
Identities = 45/137 (32%), Positives = 57/137 (40%), Gaps = 14/137 (10%)
Frame = +3
Query: 105 AAAATLDELTASSAALLAAGGHVWGGGSTGGRQSSGSLSDAGPQPNPGSCPHYPHRLPTG 284
A A + + S+ AAGG GGGS+GG SG + P P P P P P
Sbjct: 1295 APAPSSGGYSGGSSGGSAAGG---GGGSSGG--YSGGSAAPPPPPPPPPPPPAPAPAPAP 1349
Query: 285 SNGAGSGGGTGGDAADGPSRRAHSFSSVLS--------------AFGAASADCPEGAVGV 422
S+G SGG +GG AA G + ++ + A A A G G
Sbjct: 1350 SSGGYSGGSSGGSAAGGGGGSSGGYTGGSAAPPPPPPPPPPPPPAPAPAPAPSSGGYSGG 1409
Query: 423 AGGGGAGGGVQDVSGGY 473
+ GG A GG SGGY
Sbjct: 1410 SSGGSAAGGGGGSSGGY 1426
Score = 51.2 bits (121), Expect = 1e-05
Identities = 40/114 (35%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Frame = +3
Query: 165 GHVWGGGSTGGRQSSGSLS--DAGPQPNPGSCPHYPHRLPTGSNGAGSGGGTGGDAADGP 338
G+ G S GG SSG S A P P P P P P S+G SGG +GG AA G
Sbjct: 827 GYSEGSSSGGGGGSSGGYSGGSAAPPPPPPPPPPAPAPAPAPSSGGYSGGSSGGSAAGG- 885
Query: 339 SRRAHSFSSVLSAFGAASADCPEGAVGVAGGGGAGGGVQDVSGGYQLVFPAAEP 500
G S+ G GGGG+ GG SGG + P P
Sbjct: 886 --------------GGGSSGGYSGGSSSGGGGGSSGG---YSGGSAALPPPPPP 922
Score = 50.8 bits (120), Expect = 2e-05
Identities = 49/158 (31%), Positives = 60/158 (37%), Gaps = 25/158 (15%)
Frame = -3
Query: 505 SSGSAAGNTS**PPLTSCTPPPAPPPPATPTAPSGQS-----AEAAPKALNTLLKLCARR 341
SSG +G ++ PP PPP PPPPA AP+ S A + A
Sbjct: 905 SSGGYSGGSAALPPPPPPPPPPPPPPPAPAPAPAPSSGGYSGASSGGSAAGGGGGSSGGY 964
Query: 340 DGPSAASPPVPPPLPAPLLPV--------------------GNLWG*WGQLPGLGCGPAS 221
G SAA PP PPP P P P G+ G G G G ++
Sbjct: 965 SGGSAAPPPPPPPPPPPPPPPPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSGGYSGGSA 1024
Query: 220 LRLPELCRPPVLPPPHTCPPAANSAAELAVSSSNVAAA 107
P PP PPP P A S+ + SS +AA
Sbjct: 1025 APPP----PPPPPPPAPAPAPAPSSGGYSGGSSGGSAA 1058
Score = 50.1 bits (118), Expect = 3e-05
Identities = 49/154 (31%), Positives = 58/154 (36%), Gaps = 21/154 (13%)
Frame = -3
Query: 505 SSGSAAGNTS**PPLTSCTPPPAPPPPATPTAPSGQSA-----EAAPKALNTLLKLCARR 341
SSG +G ++ PP PPP PPPPA AP+ S + A
Sbjct: 1165 SSGGYSGGSAAPPP----PPPPPPPPPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSGGY 1220
Query: 340 DGPSAASPPVPPPLPAPLLPV----------------GNLWG*WGQLPGLGCGPASLRLP 209
G SAA PP PPP P P P G+ G G G G S P
Sbjct: 1221 SGGSAAPPPPPPPPPPPPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSG-GYTGGSAAPP 1279
Query: 208 ELCRPPVLPPPHTCPPAANSAAELAVSSSNVAAA 107
PP PPP P A S+ + SS +AA
Sbjct: 1280 PPPPPPPPPPPAPAPAPAPSSGGYSGGSSGGSAA 1313
Score = 48.5 bits (114), Expect = 8e-05
Identities = 49/150 (32%), Positives = 58/150 (38%), Gaps = 17/150 (11%)
Frame = -3
Query: 505 SSGSAAGNTS**PPLTSCTPPPAPPPPATPTAPSGQSA-----EAAPKALNTLLKLCARR 341
S G + G+T+ PP PPP PPPPA AP+ S + A
Sbjct: 1065 SGGYSGGSTAPPPP----PPPPPPPPPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSGGY 1120
Query: 340 DGPSAASPPVPPP-----LPAPLLPVGNLWG*--WGQLPGLGCGPAS-----LRLPELCR 197
G SAA PP PPP PAP G G G G G G + P
Sbjct: 1121 SGGSAAPPPPPPPPPPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSGGYSGGSAAPPPPP 1180
Query: 196 PPVLPPPHTCPPAANSAAELAVSSSNVAAA 107
PP PPP P A S+ + SS +AA
Sbjct: 1181 PPPPPPPAPAPAPAPSSGGYSGGSSGGSAA 1210
Score = 48.1 bits (113), Expect = 1e-04
Identities = 32/108 (29%), Positives = 46/108 (41%), Gaps = 2/108 (1%)
Frame = +3
Query: 156 AAGGHVWGGGSTGGRQSSGSLSDAG--PQPNPGSCPHYPHRLPTGSNGAGSGGGTGGDAA 329
+ GG+ GGG GG S G G +P+ G + P+G G + GG GG +
Sbjct: 445 SGGGYASGGGGGGGYASGGGGGAGGGYAKPSGGGGGGGGYAKPSGGGGGYASGGGGGSSG 504
Query: 330 DGPSRRAHSFSSVLSAFGAASADCPEGAVGVAGGGGAGGGVQDVSGGY 473
G ++ + S G S+ + G GGG +GG GGY
Sbjct: 505 GGYAKSSGGGGGYASGGGGGSSGGSYASGGGGGGGSSGGS----GGGY 548
Score = 47.4 bits (111), Expect = 2e-04
Identities = 47/152 (30%), Positives = 57/152 (36%), Gaps = 19/152 (12%)
Frame = -3
Query: 505 SSGSAAGNTS**PPLTSCTPPPAPPPPATPTAPSG---QSAEAAPKALNTLLKLCARRDG 335
SSG +G ++ PP PPP PP PA APS + A G
Sbjct: 1116 SSGGYSGGSAAPPP----PPPPPPPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSGGYSG 1171
Query: 334 PSAASPPVPPPLPAPLLPV----------------GNLWG*WGQLPGLGCGPASLRLPEL 203
SAA PP PPP P P P G+ G G G G ++ P
Sbjct: 1172 GSAAPPPPPPPPPPPPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSGGYSGGSAAPPPP- 1230
Query: 202 CRPPVLPPPHTCPPAANSAAELAVSSSNVAAA 107
PP PPP P A S+ + SS +AA
Sbjct: 1231 -PPPPPPPPAPAPAPAPSSGGYSGGSSGGSAA 1261
Score = 47.4 bits (111), Expect = 2e-04
Identities = 38/119 (31%), Positives = 47/119 (38%), Gaps = 14/119 (11%)
Frame = +3
Query: 159 AGGHVWGGGSTGGRQSSGSLSDAGPQPNPGSCPHYPHRLPTGSNGAGSGGGTGGDAADGP 338
+GG G + GG SSG S P P P P P S+G SGG +GG AA G
Sbjct: 1407 SGGSSGGSAAGGGGGSSGGYSGGSAAPPPP--PPAPAPAPAPSSGGYSGGSSGGSAAGGG 1464
Query: 339 SRRAHSFSSVLS--------------AFGAASADCPEGAVGVAGGGGAGGGVQDVSGGY 473
+ ++ + A A A G G + GG A GG SGGY
Sbjct: 1465 GGSSGGYTGGSAAPPPPPPPPPPPPPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSGGY 1523
Score = 47.0 bits (110), Expect = 2e-04
Identities = 42/134 (31%), Positives = 47/134 (34%), Gaps = 13/134 (9%)
Frame = -3
Query: 505 SSGSAAGNTS**PPLTSCTPPPAPPPPATPTAPSG--QSAEAAPKALNTLLKLCARRDGP 332
SSG G ++ PP PPP P P P SG + A G
Sbjct: 1267 SSGGYTGGSAAPPPPPPPPPPPPPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSGGYSGG 1326
Query: 331 SAASPPVPPPLPAPLLPV-----------GNLWG*WGQLPGLGCGPASLRLPELCRPPVL 185
SAA PP PPP P P P G G G G G G + PP
Sbjct: 1327 SAAPPPPPPPPPPPPAPAPAPAPSSGGYSGGSSG--GSAAGGGGGSSGGYTGGSAAPPPP 1384
Query: 184 PPPHTCPPAANSAA 143
PPP PP A + A
Sbjct: 1385 PPPPPPPPPAPAPA 1398
Score = 47.0 bits (110), Expect = 2e-04
Identities = 44/139 (31%), Positives = 53/139 (37%), Gaps = 27/139 (19%)
Frame = +3
Query: 138 SSAALLAAGGHVWGGGSTGGRQSSGSLSDAGPQPNPGSCPHYPHRLPTGSNGAGSGGGTG 317
SS A+GG GGGS+GG S + A P P P P P P S+G SGG +G
Sbjct: 759 SSGGGYASGGG-GGGGSSGGSGGRYSSAAAPPPPPP---PPPPAPAPAPSSGGYSGGSSG 814
Query: 318 GDAADGPSRRAHSFSSVLSAFGA---------------------------ASADCPEGAV 416
AA G + +S S+ G A A G
Sbjct: 815 DSAAGGGGGSSRGYSEGSSSGGGGGSSGGYSGGSAAPPPPPPPPPPAPAPAPAPSSGGYS 874
Query: 417 GVAGGGGAGGGVQDVSGGY 473
G + GG A GG SGGY
Sbjct: 875 GGSSGGSAAGGGGGSSGGY 893
Score = 47.0 bits (110), Expect = 2e-04
Identities = 40/131 (30%), Positives = 49/131 (36%), Gaps = 25/131 (19%)
Frame = +3
Query: 156 AAGGHVWGGGSTGGRQSSGSLSDAG--------PQPNPGSCPHYPHRLPTGSNGAGSGGG 311
++GG+ G S GG SSG S P P P P P P S+G SG
Sbjct: 889 SSGGYSGGSSSGGGGGSSGGYSGGSAALPPPPPPPPPPPPPPPAPAPAPAPSSGGYSGAS 948
Query: 312 TGGDAADGPSRRAHSFSSVLS-----------------AFGAASADCPEGAVGVAGGGGA 440
+GG AA G + +S + A A A G G + GG A
Sbjct: 949 SGGSAAGGGGGSSGGYSGGSAAPPPPPPPPPPPPPPPPAPAPAPAPSSGGYSGGSSGGSA 1008
Query: 441 GGGVQDVSGGY 473
GG SGGY
Sbjct: 1009 AGGGGGSSGGY 1019
Score = 46.6 bits (109), Expect = 3e-04
Identities = 47/144 (32%), Positives = 52/144 (35%), Gaps = 23/144 (15%)
Frame = -3
Query: 505 SSGSAAGN---TS**PPLTSCTPPPAPPPPATPTAPSGQSA---------EAAPKALNTL 362
S GSAAG +S S PPP PPPP P AP+ A + A
Sbjct: 1154 SGGSAAGGGGGSSGGYSGGSAAPPPPPPPPPPPPAPAPAPAPSSGGYSGGSSGGSAAGGG 1213
Query: 361 LKLCARRDGPSAASPPVPPPLPAPLLPV-----------GNLWG*WGQLPGLGCGPASLR 215
G SAA PP PPP P P P G G G G G G +
Sbjct: 1214 GGSSGGYSGGSAAPPPPPPPPPPPPAPAPAPAPSSGGYSGGSSG--GSAAGGGGGSSGGY 1271
Query: 214 LPELCRPPVLPPPHTCPPAANSAA 143
PP PPP PP A + A
Sbjct: 1272 TGGSAAPPPPPPPPPPPPPAPAPA 1295
Score = 46.6 bits (109), Expect = 3e-04
Identities = 32/86 (37%), Positives = 42/86 (48%)
Frame = +3
Query: 105 AAAATLDELTASSAALLAAGGHVWGGGSTGGRQSSGSLSDAGPQPNPGSCPHYPHRLPTG 284
A A + + S+ AAGG GGGS+GG + GS + P P P P P P
Sbjct: 1495 APAPSSGGYSGGSSGGSAAGG---GGGSSGG-YTGGSAAPPPPPPPPPPPPPAPAPAPAP 1550
Query: 285 SNGAGSGGGTGGDAADGPSRRAHSFS 362
S+G SGG +GG AA G + +S
Sbjct: 1551 SSGGYSGGSSGGSAAGGGGGSSGGYS 1576
Score = 44.7 bits (104), Expect = 0.001
Identities = 46/149 (30%), Positives = 56/149 (36%), Gaps = 16/149 (10%)
Frame = -3
Query: 505 SSGSAAGNTS**PPLTSCTPPPAPPPPATPTAPSGQSAEAAPKALNTLLKLCARRDGPSA 326
SSG +G ++ PP PPPAP P P++ + A G SA
Sbjct: 1422 SSGGYSGGSAAPPP-----PPPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSGGYTGGSA 1476
Query: 325 ASPPVPPP--------LPAPLLPVGNLWG*--WGQLPGLGCGPA------SLRLPELCRP 194
A PP PPP PAP G G G G G G + S P P
Sbjct: 1477 APPPPPPPPPPPPPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSGGYTGGSAAPPPPPPP 1536
Query: 193 PVLPPPHTCPPAANSAAELAVSSSNVAAA 107
P PPP P A S+ + SS +AA
Sbjct: 1537 PPPPPPAPAPAPAPSSGGYSGGSSGGSAA 1565
Score = 43.5 bits (101), Expect = 0.002
Identities = 46/153 (30%), Positives = 57/153 (37%), Gaps = 20/153 (13%)
Frame = -3
Query: 505 SSGSAAGNTS**PPLTSCTPPPAPPPPATPTAPS---------GQSAEAAPKALNTLLKL 353
SSG +G ++ PP PPP PP PA APS G SA +
Sbjct: 1015 SSGGYSGGSAAPPP----PPPPPPPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSGGYSG 1070
Query: 352 CARRDGPSAASPPVPPPLPAPLLPV-----------GNLWG*WGQLPGLGCGPASLRLPE 206
+ P PP PPP PAP G+ G G G G ++ P
Sbjct: 1071 GSTAPPPPPPPPPPPPPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSGGYSGGSAAPPP- 1129
Query: 205 LCRPPVLPPPHTCPPAANSAAELAVSSSNVAAA 107
PP PPP P A S+ + SS +AA
Sbjct: 1130 ---PPPPPPPAPAPAPAPSSGGYSGGSSGGSAA 1159
Score = 42.4 bits (98), Expect = 0.006
Identities = 49/155 (31%), Positives = 57/155 (36%), Gaps = 22/155 (14%)
Frame = -3
Query: 505 SSGSAAGN---TS**PPLTSCTPPPAPPPPATPTAP---------------SGQSAEAAP 380
S GSAAG +S S PPP PPPP P AP SG SA
Sbjct: 1308 SGGSAAGGGGGSSGGYSGGSAAPPPPPPPPPPPPAPAPAPAPSSGGYSGGSSGGSAAGGG 1367
Query: 379 KALNTLLKLCARRDGPSAASPPVPPPLPAPLLPVGNLWG*WGQLPG----LGCGPASLRL 212
+ + P PP PPP PAP P + G G G G G +S
Sbjct: 1368 GGSSGGYTGGSAAPPPPPPPPPPPPPAPAP-APAPSSGGYSGGSSGGSAAGGGGGSSGGY 1426
Query: 211 PELCRPPVLPPPHTCPPAANSAAELAVSSSNVAAA 107
P PPP P A S+ + SS +AA
Sbjct: 1427 SGGSAAPPPPPPAPAPAPAPSSGGYSGGSSGGSAA 1461
Score = 38.9 bits (89), Expect = 0.061
Identities = 35/110 (31%), Positives = 42/110 (37%), Gaps = 5/110 (4%)
Frame = +3
Query: 156 AAGGHVWGGGSTGGRQSSGSLSDAGPQPNPGSCPHYPHRLPTGSNGAGSG-----GGTGG 320
A+GG GGGS+GG +SG G G + P+G G G G GG GG
Sbjct: 437 ASGG---GGGSSGGGYASGGGGGGGYASGGGGGAGGGYAKPSGGGGGGGGYAKPSGGGGG 493
Query: 321 DAADGPSRRAHSFSSVLSAFGAASADCPEGAVGVAGGGGAGGGVQDVSGG 470
A+ G G S+ GGG A GG SGG
Sbjct: 494 YASGG---------------GGGSSGGGYAKSSGGGGGYASGGGGGSSGG 528
Score = 37.4 bits (85), Expect = 0.18
Identities = 50/184 (27%), Positives = 61/184 (32%), Gaps = 51/184 (27%)
Frame = -3
Query: 505 SSGSAAGNTS**PPLTSCTPPPAPPPPATPTAPS------GQSAEAAPKALNTLLK---- 356
SSG + G S + PPP PPPPA APS G S ++A +
Sbjct: 774 SSGGSGGRYS---SAAAPPPPPPPPPPAPAPAPSSGGYSGGSSGDSAAGGGGGSSRGYSE 830
Query: 355 ---------LCARRDGPSAASPPVPPPLPAPLLPV------------------------- 278
G SAA PP PPP P P
Sbjct: 831 GSSSGGGGGSSGGYSGGSAAPPPPPPPPPPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSS 890
Query: 277 ------GNLWG*WGQLPGLGCGPASLRLPELCRPPVLPPPHTCPPA-ANSAAELAVSSSN 119
+ G G G G A+L P PP PPP PA A S+ + +SS
Sbjct: 891 GGYSGGSSSGGGGGSSGGYSGGSAALPPPPPPPPPPPPPPPAPAPAPAPSSGGYSGASSG 950
Query: 118 VAAA 107
+AA
Sbjct: 951 GSAA 954
Score = 34.3 bits (77), Expect = 1.5
Identities = 24/56 (42%), Positives = 26/56 (45%)
Frame = +3
Query: 138 SSAALLAAGGHVWGGGSTGGRQSSGSLSDAGPQPNPGSCPHYPHRLPTGSNGAGSG 305
SS A+GG GGGS+GG S G S A P P P P P S G SG
Sbjct: 525 SSGGSYASGGG-GGGGSSGG--SGGGYSSAAAPPPPPPPPPAPAPAPAPSGGYASG 577
>ref|NP_217861.1| PE_PGRS [Mycobacterium tuberculosis H37Rv] gi|7442084|pir||G70846
hypothetical glycine-rich protein Rv3344c -
Mycobacterium tuberculosis (strain H37RV)
gi|2894254|emb|CAA17116.1| PE_PGRS [Mycobacterium
tuberculosis H37Rv]
Length = 484
Score = 52.4 bits (124), Expect(2) = 2e-07
Identities = 39/115 (33%), Positives = 49/115 (41%), Gaps = 11/115 (9%)
Frame = +3
Query: 159 AGGHVWGGGS------TGGRQSSGSLSD-AGPQPNPGSCPHYPHRLPTGSNGAGSGGGTG 317
AGG+ GG+ GG+ G D GP NPGS G+ G+G GG G
Sbjct: 132 AGGNGGNGGAGGTGVVLGGKGGDGGNGDHGGPATNPGSGSR------GGAGGSGGNGGAG 185
Query: 318 GDAADGPSRRAHSFSSVLSAFGAASADCPEGAVGVAGG----GGAGGGVQDVSGG 470
G+A + + +FGA S G G GG GGAGG + SGG
Sbjct: 186 GNATGSGGKGGAGGNGGDGSFGATSGPASIGVTGAPGGNGGKGGAGGSNPNGSGG 240
Score = 47.8 bits (112), Expect = 1e-04
Identities = 36/109 (33%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
Frame = +3
Query: 153 LAAGGHVWGGGSTGGRQSSGSLSDAGPQPNPGSCPHYPHRLPTGSNGAGSGGGTGGDAAD 332
+A GG G G GGR G + AG Q G G NG GS GG GG
Sbjct: 350 VAGGG---GNGGVGGRGGDGVFAGAGGQGGLGG---------QGGNGGGSTGGNGG---- 393
Query: 333 GPSRRAHSFSSVLSAFGAASADCPEGAVGVAGG----GGAGGGVQDVSG 467
L G + P+G G GG GG GGG Q +G
Sbjct: 394 ------------LGGAGGGGGNAPDGGFGGNGGKGGQGGIGGGTQSATG 430
Score = 44.3 bits (103), Expect = 0.001
Identities = 35/105 (33%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Frame = +3
Query: 159 AGGHVWGGGSTGGRQSSGSLSDAGPQPNPGSCPHYPHRLPTGSNGAGSGGGT-GGDAADG 335
AGG+ GGG G S G+ G PGS + G+NG S G GG+A +G
Sbjct: 37 AGGN-GGGGDAGNAGSGGNGGKGGDGVGPGSTGGAGGKGGAGANGGSSNGNARGGNAGNG 95
Query: 336 PSRRAHSFSSVLSAFGAASADCPEGAVGVAGGGGAGGGVQDVSGG 470
A A GA G G G GG+G G+ +GG
Sbjct: 96 GHGGAGGSGDTGGAGGAG------GQGGFGGTGGSGSGIGGGAGG 134
Score = 42.4 bits (98), Expect = 0.006
Identities = 40/119 (33%), Positives = 48/119 (39%), Gaps = 8/119 (6%)
Frame = +3
Query: 138 SSAALLAAGGHVWGGGSTGGRQSSGSLSDAGPQPNPGSCPHYPHRLPTGSNGAGSG--GG 311
+S + A G G G GG +GS D G N G+ + GS GA SG GG
Sbjct: 213 ASIGVTGAPGGNGGKGGAGGSNPNGSGGDGGKGGNGGAGGN------GGSIGANSGIVGG 266
Query: 312 TGGDAADGPSRRAHSFSSVLSAFGAASADCPEGAVGVAG------GGGAGGGVQDVSGG 470
+GG G A S+ S G D G GV G GG GGG +GG
Sbjct: 267 SGGAGGAGG---AGGNGSLSSGEGGKGGDGGHGGDGVGGNSSVTQGGSGGGGGAGGAGG 322
Score = 38.1 bits (87), Expect = 0.10
Identities = 33/112 (29%), Positives = 40/112 (35%), Gaps = 5/112 (4%)
Frame = +3
Query: 159 AGGHVWGGGSTGGRQSSGSLSDAGPQPNPGSCPHYPHRLPTGSNGAGSGGGT-----GGD 323
AGG+ G G GG +G G P S P G+ G G GG+ GGD
Sbjct: 184 AGGNATGSGGKGGAGGNGGDGSFGATSGPASIG--VTGAPGGNGGKGGAGGSNPNGSGGD 241
Query: 324 AADGPSRRAHSFSSVLSAFGAASADCPEGAVGVAGGGGAGGGVQDVSGGYQL 479
G + A + GA S G+ GG G GG G L
Sbjct: 242 GGKGGNGGAGGNGG---SIGANS--------GIVGGSGGAGGAGGAGGNGSL 282
Score = 37.7 bits (86), Expect = 0.14
Identities = 34/121 (28%), Positives = 41/121 (33%), Gaps = 16/121 (13%)
Frame = +3
Query: 156 AAGGHVWGGG--STGGRQSSGSLSDAGPQPNPGSCPHYPHRLPTGSNGAGSGGGTGGDAA 329
A GG+ GG GG +G AG Q G + G+ G G GG GG
Sbjct: 87 ARGGNAGNGGHGGAGGSGDTGGAGGAGGQGGFGGTGGSGSGIGGGAGGNGGNGGAGGTGV 146
Query: 330 --------------DGPSRRAHSFSSVLSAFGAASADCPEGAVGVAGGGGAGGGVQDVSG 467
GP+ S S + + A G G GGAGG D S
Sbjct: 147 VLGGKGGDGGNGDHGGPATNPGSGSRGGAGGSGGNGGAGGNATGSGGKGGAGGNGGDGSF 206
Query: 468 G 470
G
Sbjct: 207 G 207
Score = 35.0 bits (79), Expect = 0.88
Identities = 29/98 (29%), Positives = 35/98 (35%)
Frame = +3
Query: 156 AAGGHVWGGGSTGGRQSSGSLSDAGPQPNPGSCPHYPHRLPTGSNGAGSGGGTGGDAADG 335
AA G G G GG S+G+ G+ GAG GG GG+ G
Sbjct: 6 AAHGGSGGAGGNGGAGSAGN---------------------GGAGGAGGNGGAGGNGGGG 44
Query: 336 PSRRAHSFSSVLSAFGAASADCPEGAVGVAGGGGAGGG 449
+ A S + G G G GG GA GG
Sbjct: 45 DAGNAGSGGNG-GKGGDGVGPGSTGGAGGKGGAGANGG 81
Score = 35.0 bits (79), Expect = 0.88
Identities = 36/127 (28%), Positives = 46/127 (35%), Gaps = 15/127 (11%)
Frame = +3
Query: 135 ASSAALLAAGGHVWGGGSTG-GRQSSGSLSDAGPQPNPGSCPHYPHRLPTGSNGAGSG-- 305
A+S + +GG GG+ G G SSG G + G + G +G G G
Sbjct: 259 ANSGIVGGSGGAGGAGGAGGNGSLSSGEGGKGGDGGHGGDGVGGNSSVTQGGSGGGGGAG 318
Query: 306 -----------GGTGGDAADGPSRRAHSFSSVLSAFGAASADCPEGAVGVAGGGGAGG-G 449
GG GGD G + +V G G AG GG GG G
Sbjct: 319 GAGGSGFFGGKGGFGGDGGQGGPNGGGTVGTVAGGGGNGGVGGRGGDGVFAGAGGQGGLG 378
Query: 450 VQDVSGG 470
Q +GG
Sbjct: 379 GQGGNGG 385
Score = 24.6 bits (52), Expect(2) = 2e-07
Identities = 14/39 (35%), Positives = 15/39 (37%)
Frame = +2
Query: 44 RSGRGAAASDERHAA*SAPAGCGGHVGRADSQLCGAVGG 160
+ G GA A AG GGH G S G GG
Sbjct: 73 KGGAGANGGSSNGNARGGNAGNGGHGGAGGSGDTGGAGG 111
>pir||A53662 homeotic protein HB9 - human
Length = 403
Score = 56.6 bits (135), Expect = 3e-07
Identities = 46/141 (32%), Positives = 62/141 (43%), Gaps = 15/141 (10%)
Frame = +3
Query: 69 AMSAMPRNRHLRAAAATLDELTASSAALLAAGGHVWGGGSTGGRQSSGSLSDAGPQPNPG 248
A+ A+ R A +A L +T+ +AA GG GGG++GG S S + + P P
Sbjct: 11 ALLAVDPPRAASAQSAPLALVTSLAAAASGTGGGGGGGGASGGTSGSCSPASSEPPAAPA 70
Query: 249 S-----CPHYPHRLPT--------GSNGAGSGGGTGGDAADGPSRRAHSFSSVLSAFGAA 389
P P L G GAG GGG G GP AH ++ +A AA
Sbjct: 71 DRLRAESPSPPRLLAAHCALLPKPGFLGAGGGGGGTGGGHGGPHHHAHPGAAAAAAAAAA 130
Query: 390 SADCPEG--AVGVAGGGGAGG 446
+A G A+G+ GG GG
Sbjct: 131 AAAAAAGGLALGLHPGGAQGG 151
>gb|AAD41467.1| homeotic protein HB9 [Homo sapiens]
Length = 355
Score = 55.8 bits (133), Expect = 5e-07
Identities = 46/141 (32%), Positives = 61/141 (42%), Gaps = 15/141 (10%)
Frame = +3
Query: 69 AMSAMPRNRHLRAAAATLDELTASSAALLAAGGHVWGGGSTGGRQSSGSLSDAGPQPNPG 248
A+ A+ R A +A L +T+ +AA GG GGG++GG S S + + P P
Sbjct: 11 ALLAVDPPRAASAQSAPLALVTSLAAAASGTGGGGGGGGASGGTSGSCSPASSEPPAAPA 70
Query: 249 S-----CPHYPHRLPT--------GSNGAGSGGGTGGDAADGPSRRAHSFSSVLSAFGAA 389
P P L G GAG GGG G GP AH + +A AA
Sbjct: 71 DRLRAESPSPPRLLAAHCALLPKPGFLGAGGGGGGTGGGHGGPHHHAHPGARAAAAAAAA 130
Query: 390 SADCPEG--AVGVAGGGGAGG 446
+A G A+G+ GG GG
Sbjct: 131 AAAAAAGGLALGLHPGGAQGG 151
