Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003194A_C01 KCC003194A_c01
(530 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_223539.1| similar to Whsc2h protein [Rattus norvegicus] 43 0.003
emb|CAB02634.1| cell wall protein [Yarrowia lipolytica] 42 0.005
emb|CAA60698.1| HP8 peptide [Homo sapiens] 42 0.005
gb|AAF18101.1|AF204400_1 FrgA [Myxococcus xanthus] 42 0.006
pir||S54834 HP8 peptide - human (fragment) 42 0.006
>ref|XP_223539.1| similar to Whsc2h protein [Rattus norvegicus]
Length = 530
Score = 42.7 bits (99), Expect = 0.003
Identities = 38/111 (34%), Positives = 50/111 (44%), Gaps = 11/111 (9%)
Frame = +2
Query: 212 QLGS--SGATRPAVAQQPSLEDGADALRLARCSLTASLPPR*CTRR*RRRPAAPLPLLP- 382
+LGS S T P+ + PS A S T PP R P+AP P LP
Sbjct: 309 KLGSLNSEPTLPSTSYLPSTPSVVPASSYIPSSETPPAPPSREASRPPEEPSAPSPTLPT 368
Query: 383 ----RLPLPQSSIQASAPTTTAAPPARTRPTACPSRMPS----PVAVPAPR 511
R P+ S + + P T AAP + PTA P+ P+ PVA+ AP+
Sbjct: 369 QFKQRAPMYNSGLSPATP-TPAAPASPLTPTAPPAVTPTAQTPPVAMVAPQ 418
>emb|CAB02634.1| cell wall protein [Yarrowia lipolytica]
Length = 285
Score = 42.0 bits (97), Expect = 0.005
Identities = 26/67 (38%), Positives = 37/67 (54%), Gaps = 1/67 (1%)
Frame = +2
Query: 311 ASLPPR*CTRR*RRRPAAPLPLLPRLPLPQSSIQASAPTTTAAPPARTRPTACP-SRMPS 487
A LPPR R R P+ P LP P P S+ +P ++ + P +RPT P SR+ S
Sbjct: 209 APLPPRPSLRSLRSSPSLPPLPLPPSPSPSLSLPPRSPRSSPSLPPLSRPTLPPTSRLLS 268
Query: 488 PVAVPAP 508
++VP+P
Sbjct: 269 LLSVPSP 275
>emb|CAA60698.1| HP8 peptide [Homo sapiens]
Length = 341
Score = 42.0 bits (97), Expect = 0.005
Identities = 36/104 (34%), Positives = 43/104 (40%), Gaps = 7/104 (6%)
Frame = +2
Query: 221 SSGATRPAVA-QQPSLEDGADALRLARCSLTASLPPR*CTRR*RRRPAA------PLPLL 379
S RP V Q+P + R CSLT+ RR RRRP P
Sbjct: 137 SGPGLRPLVIKQEPRGRMKPSSWRWPACSLTS--------RRRRRRPRTRTRTRRPRTWP 188
Query: 380 PRLPLPQSSIQASAPTTTAAPPARTRPTACPSRMPSPVAVPAPR 511
PR +S A P T + R RP CP+R P P +VPA R
Sbjct: 189 PRTCSSRSRTAARPPCTCSPVTPRRRPRPCPARTPRPRSVPACR 232
>gb|AAF18101.1|AF204400_1 FrgA [Myxococcus xanthus]
Length = 883
Score = 41.6 bits (96), Expect = 0.006
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 296 RCSLTASLPPR*CTRR*RRRP---AAPLPLLPRLPLPQSSIQASAPTTTAAPPARTRPTA 466
R L ++P R +RP AA +P+LP P P ++ ++ +T A+PPA T P
Sbjct: 184 RAPLRLNMPQAEAPARPAQRPTPQAAQIPVLPFTPAPGTAPSSANTSTPASPPAATLPPR 243
Query: 467 CPSRMPSP 490
P+ P+P
Sbjct: 244 APATAPAP 251
>pir||S54834 HP8 peptide - human (fragment)
Length = 200
Score = 41.6 bits (96), Expect = 0.006
Identities = 32/95 (33%), Positives = 40/95 (41%), Gaps = 6/95 (6%)
Frame = +2
Query: 245 VAQQPSLEDGADALRLARCSLTASLPPR*CTRR*RRRPAA------PLPLLPRLPLPQSS 406
+ Q+P + R CSLT+ RR RRRP P PR +S
Sbjct: 5 IKQEPRGRMKPSSWRWPACSLTS--------RRRRRRPRTRTRTRRPRTWPPRTCSSRSR 56
Query: 407 IQASAPTTTAAPPARTRPTACPSRMPSPVAVPAPR 511
A P T + R RP CP+R P P +VPA R
Sbjct: 57 TAARPPCTCSPVTPRRRPRPCPARTPRPRSVPACR 91
