KCC003191A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003191A_C01 KCC003191A_c01
GCTTATAATAGTAGTAGCCTGTCTGTCGTGCCGCTGTTGCTTCAGACACCGACCGAACCC
ATTCAGTGCAGCAATTGCGTCAGCGCGTCCGTCAGCAAAGATGGCGTGGCCTTCAGAGCT
TAAGGAGATGCACAACCACCACATGGAAAGCACACGATGGAAGGAGCTCAAATGGCGCAA
CGATGACATTGTCATCTGCAGCTACGCCAAGGCGGGCACCACCCTCACCCAGCAGTTGGT
GGGCCAGCTCATCAGCGGCGGTGACCCGACGTTTCGCACCGCCGACGCGTCGCCGTGGCT
GGACATGCGTGTGATACCCAAGGAGCCCATGATGGCGGCGCTGGAGGCGCAGACCCAGCG
CCGCTTCATCAAGAGCCACCTGCCCACCGACTGCCTGCCGTACAACCCCAACACCAAGTA
CATCTACCTCGTGCGCGATGGCCGCGACATGTGCTGGAGCCTGTACAACCACCACTCAAC
CGCCAACGCCATGTGGTACAGCGTCTTGAACGACAC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003191A_C01 KCC003191A_c01
         (516 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_638259.1| sulfotransferase [Xanthomonas campestris pv. ca...   120  1e-26
ref|NP_641154.1| sulfotransferase [Xanthomonas axonopodis pv. ci...   119  2e-26
ref|ZP_00074591.1| hypothetical protein [Trichodesmium erythraeu...    97  9e-20
ref|NP_335868.1| sulfotransferase, putative [Mycobacterium tuber...    81  7e-15
ref|NP_215889.1| hypothetical protein Rv1373 [Mycobacterium tube...    81  7e-15

>ref|NP_638259.1| sulfotransferase [Xanthomonas campestris pv. campestris str. ATCC
           33913] gi|21114114|gb|AAM42183.1| sulfotransferase
           [Xanthomonas campestris pv. campestris str. ATCC 33913]
          Length = 304

 Score =  120 bits (300), Expect = 1e-26
 Identities = 59/117 (50%), Positives = 77/117 (65%)
 Frame = +2

Query: 122 KEMHNHHMESTRWKELKWRNDDIVICSYAKAGTTLTQQLVGQLISGGDPTFRTADASPWL 301
           +E  N   +S+ W +L  R  DIVI SYAKAGTT  QQ+V QLI GG+P    +  SPW+
Sbjct: 11  REYPNRFFDSSVWNDLALRRGDIVIASYAKAGTTWLQQIVAQLIFGGEPNIDVSAISPWV 70

Query: 302 DMRVIPKEPMMAALEAQTQRRFIKSHLPTDCLPYNPNTKYIYLVRDGRDMCWSLYNH 472
           D     K   +A LEAQ+QRRF+K+HLP D L  +P  +Y+Y+ RDGRD+  SLY+H
Sbjct: 71  DGVYPDKATKLALLEAQSQRRFMKTHLPADALVTSPLARYLYIGRDGRDIALSLYDH 127

>ref|NP_641154.1| sulfotransferase [Xanthomonas axonopodis pv. citri str. 306]
           gi|21106926|gb|AAM35690.1| sulfotransferase [Xanthomonas
           axonopodis pv. citri str. 306]
          Length = 310

 Score =  119 bits (298), Expect = 2e-26
 Identities = 57/130 (43%), Positives = 75/130 (56%)
 Frame = +2

Query: 101 MAWPSELKEMHNHHMESTRWKELKWRNDDIVICSYAKAGTTLTQQLVGQLISGGDPTFRT 280
           M  PS+ +E  N   +ST W +  +R+DD+VI SYAKAGTT  QQ+V QLI GG      
Sbjct: 1   MGMPSKQREYSNRFFDSTVWNDFAFRDDDVVIASYAKAGTTWVQQIVAQLIFGGAEEIEV 60

Query: 281 ADASPWLDMRVIPKEPMMAALEAQTQRRFIKSHLPTDCLPYNPNTKYIYLVRDGRDMCWS 460
           +  SPW D     K      L  Q  RRF+K+HLP D L  +   +Y+Y+ RD RD+ WS
Sbjct: 61  SRLSPWFDSVYPDKATKQRLLAEQRHRRFVKTHLPADALVLSERARYLYVGRDARDIVWS 120

Query: 461 LYNHHSTANA 490
           LY+H    +A
Sbjct: 121 LYDHQRAVSA 130

>ref|ZP_00074591.1| hypothetical protein [Trichodesmium erythraeum IMS101]
          Length = 297

 Score = 97.4 bits (241), Expect = 9e-20
 Identities = 52/112 (46%), Positives = 72/112 (63%), Gaps = 1/112 (0%)
 Frame = +2

Query: 149 STRWKELKWRNDDIVICSYAKAGTTLTQQLVGQLISGGDPTFRTADASPWLD-MRVIPKE 325
           ST W  +K RN DIVI S  K+GTTLTQQ+V  +++G D      D SPW++ + + P E
Sbjct: 22  STIWDLIKPRNTDIVISSCYKSGTTLTQQIVNLMVNGHDDFESLHDLSPWVEEIFITPPE 81

Query: 326 PMMAALEAQTQRRFIKSHLPTDCLPYNPNTKYIYLVRDGRDMCWSLYNHHST 481
              + +E+ +  R +KSHL  + LP  P  KYIYLVRDGRD+  SLY+H+ +
Sbjct: 82  NKKSWIESLSSPRILKSHLLFEALPCYPEWKYIYLVRDGRDVGLSLYHHYQS 133

>ref|NP_335868.1| sulfotransferase, putative [Mycobacterium tuberculosis CDC1551]
           gi|13881028|gb|AAK45682.1| sulfotransferase, putative
           [Mycobacterium tuberculosis CDC1551]
          Length = 320

 Score = 81.3 bits (199), Expect = 7e-15
 Identities = 46/124 (37%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
 Frame = +2

Query: 146 ESTRWKELKWRNDDIVICSYAKAGTTLTQQLVGQLI-SGGDPTFRTADASPWLDMRVIPK 322
           ++ RW  L+ R+ DI+I + +K+G T TQ+LV  L+  G D     +  SPWLD  + P 
Sbjct: 13  DNLRWDALQLRDGDIIISAPSKSGLTWTQRLVSLLVFDGPDLPGPLSTVSPWLDQTIRPI 72

Query: 323 EPMMAALEAQTQRRFIKSHLPTDCLPYNPNTKYIYLVRDGRDMCWSLYNHHSTANAMWYS 502
           E ++A L+AQ  RRFIK+H P D L  +    YI + RD RD   S+    +  N     
Sbjct: 73  EEVVATLDAQQHRRFIKTHTPLDGLVLDDRVSYICVGRDPRDAAVSMLYQSANMNEDRMR 132

Query: 503 VLND 514
           +L++
Sbjct: 133 ILHE 136

>ref|NP_215889.1| hypothetical protein Rv1373 [Mycobacterium tuberculosis H37Rv]
           gi|7476746|pir||B70958 hypothetical protein Rv1373 -
           Mycobacterium tuberculosis  (strain H37RV)
           gi|1621255|emb|CAB02651.1| hypothetical protein Rv1373
           [Mycobacterium tuberculosis H37Rv]
          Length = 326

 Score = 81.3 bits (199), Expect = 7e-15
 Identities = 46/124 (37%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
 Frame = +2

Query: 146 ESTRWKELKWRNDDIVICSYAKAGTTLTQQLVGQLI-SGGDPTFRTADASPWLDMRVIPK 322
           ++ RW  L+ R+ DI+I + +K+G T TQ+LV  L+  G D     +  SPWLD  + P 
Sbjct: 19  DNLRWDALQLRDGDIIISAPSKSGLTWTQRLVSLLVFDGPDLPGPLSTVSPWLDQTIRPI 78

Query: 323 EPMMAALEAQTQRRFIKSHLPTDCLPYNPNTKYIYLVRDGRDMCWSLYNHHSTANAMWYS 502
           E ++A L+AQ  RRFIK+H P D L  +    YI + RD RD   S+    +  N     
Sbjct: 79  EEVVATLDAQQHRRFIKTHTPLDGLVLDDRVSYICVGRDPRDAAVSMLYQSANMNEDRMR 138

Query: 503 VLND 514
           +L++
Sbjct: 139 ILHE 142



EST assemble image


clone accession position
1 MX222a03_r BP090315 1 430
2 LCL037b10_r AV628128 107 315
3 MXL048e07_r BP095866 112 565
4 LCL051h06_r AV629092 124 617




Chlamydomonas reinhardtii
Kazusa DNA Research Institute