Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003190A_C01 KCC003190A_c01
(541 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB05810.1| super cysteine rich protein; SCRP [Homo sapiens] 49 6e-05
gb|AAB91452.1| CTG26 alternate open reading frame [Homo sapiens] 48 7e-05
ref|NP_791471.1| LysM domain protein [Pseudomonas syringae pv. t... 45 6e-04
gb|AAF03693.1| unknown [Picea rubens] 44 0.001
prf||2208384B transcription factor FREAC-2 44 0.002
>gb|AAB05810.1| super cysteine rich protein; SCRP [Homo sapiens]
Length = 46
Score = 48.5 bits (114), Expect = 6e-05
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -3
Query: 461 RARRCFHCCCCFYCCCCCCCWC 396
R+R C CCCC CCCCCCC C
Sbjct: 8 RSRCCCCCCCCCCCCCCCCCCC 29
Score = 46.6 bits (109), Expect = 2e-04
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3
Query: 449 CFHCCCCFYCCCCCCCWC 396
C CCCC CCCCCCC+C
Sbjct: 18 CCCCCCCCCCCCCCCCFC 35
Score = 46.6 bits (109), Expect = 2e-04
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -3
Query: 488 GIQRLGQKXRARRCFHCCCCFYCCCCCCCWC 396
G + + R C CCCC CCCCCCC C
Sbjct: 1 GCELCPDRSRCCCCCCCCCCCCCCCCCCCCC 31
Score = 45.4 bits (106), Expect = 5e-04
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -3
Query: 449 CFHCCCCFYCCCCCCCWC 396
C CCCC CCCCCCC C
Sbjct: 15 CCCCCCCCCCCCCCCCCC 32
Score = 45.4 bits (106), Expect = 5e-04
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -3
Query: 449 CFHCCCCFYCCCCCCCWC 396
C CCCC CCCCCCC C
Sbjct: 16 CCCCCCCCCCCCCCCCCC 33
Score = 44.3 bits (103), Expect = 0.001
Identities = 13/23 (56%), Positives = 15/23 (64%)
Frame = -3
Query: 449 CFHCCCCFYCCCCCCCWCAHRHA 381
C CCCC CCCCCC C +H+
Sbjct: 19 CCCCCCCCCCCCCCCFCCCLKHS 41
>gb|AAB91452.1| CTG26 alternate open reading frame [Homo sapiens]
Length = 124
Score = 48.1 bits (113), Expect = 7e-05
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = -3
Query: 461 RARRCFHCCCCFYCCCCCCCWCAHR 387
R C CCCC CCCCCCCW R
Sbjct: 98 RGMGCCCCCCCCCCCCCCCCWLLPR 122
>ref|NP_791471.1| LysM domain protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|28852091|gb|AAO55166.1| LysM domain protein
[Pseudomonas syringae pv. tomato str. DC3000]
Length = 717
Score = 45.1 bits (105), Expect = 6e-04
Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Frame = -2
Query: 528 AKPPAPMRPAPAAWHPAARPEAPSTPLLSL--LLLLLLLLLLLLLVRSSARRRRRH 367
A+P AP P A PA + S PL+SL LL +L L+LLLL+ S RR+RRH
Sbjct: 306 ARPAAPATPPAAPAQPAVTVASSSEPLVSLPILLAILALVLLLLVYAYSKRRQRRH 361
>gb|AAF03693.1| unknown [Picea rubens]
Length = 165
Score = 44.3 bits (103), Expect = 0.001
Identities = 41/151 (27%), Positives = 61/151 (40%), Gaps = 2/151 (1%)
Frame = -1
Query: 535 SPSKAPCTNAPSTGSLASSGSARSXEHAAA--FTAVAAFTAAAAAAAGALIGTPPPPTLL 362
SP+K+P T AP+T + + +A A + + A + TPPP
Sbjct: 29 SPTKSPTTPAPTTTAAPPTTTAAPPTTTATPPVSTPPPVASPPPVATPPPVATPPPVATP 88
Query: 361 VVTPNGYGFTRTRRMYSMLVSGPPCMTVVITPVAAEPAPPPRPAGWREMSSSRSSRAVAG 182
V TP + + + PP T ++TP A+ PA P A + S SS
Sbjct: 89 VATPPSPALVPS----PAVATPPPAATPIVTPTASTPAVTPSAAPIASPAVSPSS----- 139
Query: 181 FAMRTSVCSAVDAFEKAFTALMAHSVLGARF 89
TS S EK TA++A ++ G F
Sbjct: 140 ----TSGASVASTLEK--TAILAAALAGVFF 164
>prf||2208384B transcription factor FREAC-2
Length = 408
Score = 43.5 bits (101), Expect = 0.002
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = +2
Query: 383 RADERTSSSSSSSSKSSNSSESSGVLGASGRAAGCQAAGAGRIGAG 520
RA T+SSSSSSS +S +S SS AS +A C++AG G GAG
Sbjct: 3 RAAPETTSSSSSSSSASCASSSSSSNSASAPSAACKSAGGGGAGAG 48
