Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003180A_C01 KCC003180A_c01
(442 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||S77655 hypothetical protein o438 - Mycobacterium leprae gi|... 42 0.003
ref|XP_329956.1| hypothetical protein [Neurospora crassa] gi|289... 39 0.016
gb|AAB40929.1| LimA [Dictyostelium discoideum] 39 0.021
gb|AAA93172.1| polyprotein precursor gi|1237420|gb|AAA93174.1| p... 37 0.047
sp|P13899|POLG_TMEVD Genome polyprotein [Contains: Coat protein ... 37 0.047
>pir||S77655 hypothetical protein o438 - Mycobacterium leprae
gi|559908|emb|CAA86359.1| unknown [Mycobacterium leprae]
Length = 438
Score = 41.6 bits (96), Expect = 0.003
Identities = 31/78 (39%), Positives = 38/78 (47%), Gaps = 12/78 (15%)
Frame = +1
Query: 169 VKTRQRSTPHADADKAHPH-VHTTRRRQY---DTHHPACEHAIGVLGAPP--------PT 312
V+T R+TPH AHPH + T + DT +PAC H L P PT
Sbjct: 324 VETHTRATPHP----AHPHRLRLTTPYLHPASDTPYPACRHQRSALAPKPAQSHLTLPPT 379
Query: 313 APGSLPRQQQSQPTRVSP 366
GSLPRQ+Q TR+ P
Sbjct: 380 RSGSLPRQEQ---TRLPP 394
>ref|XP_329956.1| hypothetical protein [Neurospora crassa] gi|28926038|gb|EAA35027.1|
hypothetical protein [Neurospora crassa]
Length = 1671
Score = 38.9 bits (89), Expect = 0.016
Identities = 26/94 (27%), Positives = 39/94 (40%)
Frame = +2
Query: 104 ARMSPHVCHAINASHRVSFSTESKLGNDQHRMQMPTKRIRMSILRAAASMTHTIQHVSMR 283
A S H+ N+S S S + QH Q ++ ++ +L+ H +QH S
Sbjct: 1008 AMTSIHILSLPNSSMNGSLSPAEQHHQQQHHHQQQQQQQQLLLLQQHHHHHHQVQH-SQH 1066
Query: 284 LEYWERHHPRHPAACHDNNNPNQHVCRHVARNPH 385
L+ +HHP+HP QH HV H
Sbjct: 1067 LQ--SQHHPQHPQQQQQQQQQQQHHQSHVHVQQH 1098
>gb|AAB40929.1| LimA [Dictyostelium discoideum]
Length = 623
Score = 38.5 bits (88), Expect = 0.021
Identities = 22/74 (29%), Positives = 29/74 (38%), Gaps = 3/74 (4%)
Frame = +1
Query: 181 QRSTPHADADKAHPHVHTTRRRQYDTH---HPACEHAIGVLGAPPPTAPGSLPRQQQSQP 351
+ S PH +H H H + H HP H+ + P T +QQ S
Sbjct: 139 EHSHPHQSHSHSHSHSHPQHPHSHPQHPHSHPHQSHSHSHAHSQPTTTVQPQQQQQHSLS 198
Query: 352 TRVSPCGAEPTHRH 393
T V P A P+H H
Sbjct: 199 TVVHPHNATPSHHH 212
>gb|AAA93172.1| polyprotein precursor gi|1237420|gb|AAA93174.1| polyprotein
precursor
Length = 920
Score = 37.4 bits (85), Expect = 0.047
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +2
Query: 155 SFSTESKLGNDQHRMQMPTKRIRMSILRAAASMTHTIQHVSMRLEYWERHHPRHPAACHD 334
+F+T + L DQ+ +M R++ +A S T+T V Y E HH HPA+C D
Sbjct: 138 AFATMAPLLLDQNTEEMENLSDRVASDKAGNSATNTQSTVGRLCGYGEAHHGEHPASCAD 197
>sp|P13899|POLG_TMEVD Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat protein
VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1
(P1D); Picornain 2A (P2A); Core protein P2B; Core
protein P2C; Core protein P3A; Genome-linked protein VPG
(P3B); Picornain 3C (Protease 3C) (P3C); RNA-directed
RNA polymerase (P3D)] gi|74454|pir||GNNYTN genome
polyprotein - murine poliovirus (strain DA)
gi|335220|gb|AAA47928.1| TMEV polyprotein
Length = 2301
Score = 37.4 bits (85), Expect = 0.047
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +2
Query: 155 SFSTESKLGNDQHRMQMPTKRIRMSILRAAASMTHTIQHVSMRLEYWERHHPRHPAACHD 334
+F+T + L DQ+ +M R++ +A S T+T V Y E HH HPA+C D
Sbjct: 138 AFATMAPLLLDQNTEEMENLSDRVASDKAGNSATNTQSTVGRLCGYGEAHHGEHPASCAD 197
