Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003175A_C01 KCC003175A_c01
(406 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAQ24759.1| rex protein; Rex [Simian T-lymphotropic virus 1] 33 0.95
ref|NP_774930.1| bll8290 [Bradyrhizobium japonicum] gi|27356576|... 33 0.95
gb|AAQ24754.1| rex protein; Rex [Simian T-lymphotropic virus 1] 33 1.2
ref|XP_139427.3| eukaryotic translation initiation factor 2C, 2 ... 32 2.1
gb|AAM09300.1|AF418561_1 CC chemokine with stalk CK2 [Oncorhynch... 32 2.1
>gb|AAQ24759.1| rex protein; Rex [Simian T-lymphotropic virus 1]
Length = 148
Score = 33.1 bits (74), Expect = 0.95
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -1
Query: 343 PTCERSTSSTPLAPGSPQSYLQKPSYAASTTLPTGEVPPSRC 218
P E T + PL SP Q P+ T P+GE P S C
Sbjct: 91 PPSETDTWNPPLGSTSPPCLFQTPASGPKTCTPSGEAPLSAC 132
>ref|NP_774930.1| bll8290 [Bradyrhizobium japonicum] gi|27356576|dbj|BAC53555.1|
bll8290 [Bradyrhizobium japonicum USDA 110]
Length = 273
Score = 33.1 bits (74), Expect = 0.95
Identities = 17/37 (45%), Positives = 21/37 (55%)
Frame = -2
Query: 327 AQAQRR*HQDRHKATCRSRVTRPPRRCRRVKSRHRGA 217
A+A RR H RH+ + R TRPP R + R RGA
Sbjct: 85 ARAPRRAHPYRHQEARQVRKTRPPHHTRSPERRSRGA 121
>gb|AAQ24754.1| rex protein; Rex [Simian T-lymphotropic virus 1]
Length = 146
Score = 32.7 bits (73), Expect = 1.2
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -1
Query: 343 PTCERSTSSTPLAPGSPQSYLQKPSYAASTTLPTGEVPPSRC 218
P E T + PL SP Q P+ T P+GE P S C
Sbjct: 89 PPSETDTWNPPLGSTSPPCLFQTPASGPKTYTPSGEAPLSAC 130
>ref|XP_139427.3| eukaryotic translation initiation factor 2C, 2 [Mus musculus]
Length = 371
Score = 32.0 bits (71), Expect = 2.1
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = -1
Query: 328 STSSTPLAP----GSPQSYLQKPSYAASTTLPTGEVPPSRCEAARR 203
S+S P++P G ++ L PS+AA T PT VPP C + R
Sbjct: 24 SSSWEPMSPTHQLGMGRNLLLLPSWAAWTHTPTATVPPCACSSTDR 69
>gb|AAM09300.1|AF418561_1 CC chemokine with stalk CK2 [Oncorhynchus mykiss]
Length = 191
Score = 32.0 bits (71), Expect = 2.1
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1
Query: 325 TSSTPLAPGSPQSYLQKPSYAASTTLPTGEVPPS 224
+SS+P P SP S PS+ S+ P PPS
Sbjct: 129 SSSSPSVPSSPPSLSSSPSHLLSSLFPASSSPPS 162
