Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003165A_C01 KCC003165A_c01
(731 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC82621.1| pol-like protein [Danio rerio] 121 1e-26
dbj|BAC82619.1| pol-like protein [Danio rerio] 119 4e-26
emb|CAE30395.1| SI:zC215A18.1.2 (ORF2 of putative novel transpos... 111 1e-23
gb|AAF73434.2|AF254443_1 reverse transcriptase [Candida albicans] 107 2e-22
dbj|BAA95894.1| Similar to Arabidopsis thaliana chromosome2 BAC ... 107 2e-22
>dbj|BAC82621.1| pol-like protein [Danio rerio]
Length = 1148
Score = 121 bits (303), Expect = 1e-26
Identities = 78/221 (35%), Positives = 112/221 (50%), Gaps = 5/221 (2%)
Frame = +3
Query: 3 NYRPITLTDTDYRTLARVLCLRLQPVFGRIIDPEQTAFLTDRRIADNVLLLQLTPGLLKA 182
N+RPITL +TDY+ ++L R+ V +I P+Q + R+I D++LL++ + A
Sbjct: 526 NWRPITLLNTDYKFFTKILATRMSTVLEDVIHPDQACAVPGRKITDSLLLIR--DAICYA 583
Query: 183 AKKAPAVAAF-LDFYKAYDTVDRSFLLACLERMGVGAGFLTWVSRLLTDTRGAALVNGRV 359
+ +A LDF KA+D V +LL LE+MG FL WV L D +VNG +
Sbjct: 584 RDRNIRLAVVNLDFEKAFDRVSHQYLLQVLEKMGFPGRFLAWVGLLYNDLVSKIIVNGHL 643
Query: 360 SGWVPLMAGVRQGCPLAPLLYLAVAQALLSWLRS----RGHGVLANLASVLASQYADDCT 527
+ V + +GVRQGCPL+PLLY+ + L LR G + L + Y DD T
Sbjct: 644 TKAVNICSGVRQGCPLSPLLYVVCIEPLAQLLRRDKWITGFKIPGGLIASCV-LYMDDVT 702
Query: 528 PFLEGFQAVPGFLADMDVFRRASGQRLNMTKVELMVMGTVG 650
+ + D + RASG RLN K E + G G
Sbjct: 703 LLTTDLTSARRAMDLTDFYGRASGARLNRKKSEAQLFGPWG 743
>dbj|BAC82619.1| pol-like protein [Danio rerio]
Length = 1197
Score = 119 bits (299), Expect = 4e-26
Identities = 72/219 (32%), Positives = 114/219 (51%), Gaps = 4/219 (1%)
Frame = +3
Query: 3 NYRPITLTDTDYRTLARVLCLRLQPVFGRIIDPEQTAFLTDRRIADNVLLLQLTPGLLKA 182
NYRP+++ +TDY+ LA++L RL+ V +I Q + R IAD V ++ +K
Sbjct: 521 NYRPLSMLNTDYKILAKILANRLKKVVPTLITTNQAYGVIGRDIADTVTSIRDLIWYIKE 580
Query: 183 AKKAPAVAAFLDFYKAYDTVDRSFLLACLERMGVGAGFLTWVSRLLTDTRGAALVNGRVS 362
KK +D KA+D V+ S+L +++ G G F+ W+ TD +NG ++
Sbjct: 581 -KKDEGFLFSIDLEKAFDRVEHSYLFDIIQKFGFGENFIKWIKCFYTDIFSCFKINGFLT 639
Query: 363 GWVPLMAGVRQGCPLAPLLYLAVAQ----ALLSWLRSRGHGVLANLASVLASQYADDCTP 530
++ + +RQGCPL+ LLY VA+ A+ + +G + N QYADD T
Sbjct: 640 DYMEISRSIRQGCPLSALLYTLVAEPLGLAINGEKKIKGFKIEINRTEQKIYQYADDTTL 699
Query: 531 FLEGFQAVPGFLADMDVFRRASGQRLNMTKVELMVMGTV 647
FL+ F++V + D + R S ++N K E M MG V
Sbjct: 700 FLKDFKSVGKAMEIFDKYCRGSVAKVNKEKTEYMKMGKV 738
>emb|CAE30395.1| SI:zC215A18.1.2 (ORF2 of putative novel transposon similar to TX1)
[Danio rerio]
Length = 1297
Score = 111 bits (278), Expect = 1e-23
Identities = 72/231 (31%), Positives = 116/231 (50%), Gaps = 6/231 (2%)
Frame = +3
Query: 3 NYRPITLTDTDYRTLARVLCLRLQPVFGRIIDPEQTAFLTDRRIADNVLLLQLTPGLLKA 182
N+RP++L DY+ L++ L R+ +I+ +QT + DR I DN+ +L+
Sbjct: 526 NWRPVSLLCLDYKILSKCLANRIMHCLQFLIENDQTYCVPDRSIIDNIFMLRDVVDFSHL 585
Query: 183 AKKAPAVAAFLDFYKAYDTVDRSFLLACLERMGVGAGFLTWVSRLLTDTRGAALVNGRVS 362
K V + LD KA+D VD +L L+ G G FL+++ L ++ G +S
Sbjct: 586 TSKDLGVLS-LDQEKAFDRVDHGYLFNVLKNFGFGEEFLSYIKLLYSNVFIMVKAGGALS 644
Query: 363 GWVPLMAGVRQGCPLAPLLYLAVAQALLSWLRSRGHGVL----ANLASVLASQYADDCTP 530
VP+ G+RQGCPL+ LY + + LL LR +GV+ + + S YADD T
Sbjct: 645 AQVPIGRGIRQGCPLSGQLYSLMIEPLLLKLRKDLNGVVYKNGGEIVKQVLSAYADDITV 704
Query: 531 FLEGFQAVPGFLADMDVFRRASGQRLNMTKVELMVMGTVGGAG--ALPAGM 677
F+ G + + ++ + +AS ++N K E +MG G LP G+
Sbjct: 705 FITGQEDIRSLNKNIRTYEKASSAKVNWEKSEGYIMGQWNEVGYPKLPGGL 755
>gb|AAF73434.2|AF254443_1 reverse transcriptase [Candida albicans]
Length = 1149
Score = 107 bits (266), Expect = 2e-22
Identities = 68/227 (29%), Positives = 114/227 (49%), Gaps = 5/227 (2%)
Frame = +3
Query: 3 NYRPITLTDTDYRTLARVLCLRLQPVFGRIIDPEQTAFLTDRRIADNVLLLQLTPGLLKA 182
N+RPI++ R L+ V+ +L PV ++I+ QT FL +R I++++ LL + +
Sbjct: 499 NFRPISVISCAVRLLSSVIEKQLNPVLAKVIEKTQTGFLKERSISNSIYLLDMVLTRYQT 558
Query: 183 AKKAPAVAAF---LDFYKAYDTVDRSFLLACLERMGVGAGFLTWVSRLLTDTRGAALVNG 353
+K A A +A LDF KA+D+V F+L L+++G G ++ + + +N
Sbjct: 559 SKTADAESAGFINLDFRKAFDSVHHDFILKVLQQVGFGPKATNFLMAITAKQKAKVSINN 618
Query: 354 RVSGWVPLMAGVRQGCPLAPLLYLAVAQALLSWLRS--RGHGVLANLASVLASQYADDCT 527
PL GVRQG P++PL+++ + + L+ L G GV+ ++SV + YADD
Sbjct: 619 IEGPCFPLKRGVRQGNPISPLIFILILETFLARLSKEIEGIGVVNEVSSVAYTAYADDVI 678
Query: 528 PFLEGFQAVPGFLADMDVFRRASGQRLNMTKVELMVMGTVGGAGALP 668
F + ++ F R SG LN K E+ + LP
Sbjct: 679 IFFKNKNDQERIQQLLEDFGRESGLYLNNNKTEVCYFNDIPEISFLP 725
>dbj|BAA95894.1| Similar to Arabidopsis thaliana chromosome2 BAC F13B15; putative
non-LTR retroelement reverse transcriptase. (AC006300)
[Oryza sativa (japonica cultivar-group)]
Length = 1136
Score = 107 bits (266), Expect = 2e-22
Identities = 78/222 (35%), Positives = 110/222 (49%), Gaps = 10/222 (4%)
Frame = +3
Query: 6 YRPITLTDTDYRTLARVLCLRLQPVFGRIIDPEQTAFLTDRRIADNVLLLQLTPGLLKAA 185
+RPI L + ++ L ++L RL V ++I QTAF+ R I D V++L LK
Sbjct: 437 FRPICLLNVCFKFLTKILTKRLTEVAAKVIGQSQTAFIPGRHILDGVVILHEVLHTLKKG 496
Query: 186 KKAPAVAAFLDFYKAYDTVDRSFLLACLERMGVGAGFLTWVSRLLTDTRGAALVNGRVSG 365
+ + LDF KAYD V SFL L+R G ++ W+ + R A +NG V
Sbjct: 497 HHSGIIFK-LDFEKAYDRVQWSFLFEVLQRKGFNEKWVQWIKMATVEGRVAININGEVKD 555
Query: 366 WVPLMAGVRQGCPLAPLLYLAVAQALLSWL-RSRGHGVLANLASVLAS------QYADDC 524
+ GVRQG PL+PLL+ VA AL L R++ G L L L QYADD
Sbjct: 556 FFKTYRGVRQGDPLSPLLFNLVADALSEMLNRAKEAGHLEGLVPQLVPGGLTHLQYADDT 615
Query: 525 TPFLEGFQ---AVPGFLADMDVFRRASGQRLNMTKVELMVMG 641
FL + A FL + + SG ++N K E++V+G
Sbjct: 616 ILFLANTEENIATIKFL--LYCYEEMSGLKINYQKSEVIVIG 655
