KCC003160A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003160A_C01 KCC003160A_c01
cagggatgtggacctgtccgccaagccctggcccgccatcagccgccacgcccgccacct
ggtgtcgcgcatgctggagaAGGACCCCGAGCAGCGCATCCAACTGGACCAGGTGTTGAC
ACACCCCTGGCTCCGGTTGGACGGCACCGCGCCTGTGCGGGCGGTTCCCACGGGTGTGCG
CGACCGCGTCCGCCAGTTCCGCACGCTCAACCTGCTCAAGCGCGAGGCGCGCCGCGTCAT
GGCCGCCTCGCTGCCGCCCGAGGAGGTGGCGGGCCTCAAGAACCTGTTTGAGGAGCTGGA
CGCCAACGCCGACGGGCTGGTGTCACTGGAGGACCTGGTGGCGGGGCTGGCGCGCAGGGG
CGAGGCACTGGCCGGCGAGGAGGCGGCGGCGCTGCTGCGAAGTATGGACCTGAACGGCGA
CGGATTCATTGACTACCGCGAGTTCGTGGCCGCCACCTACACGCTGAGCAAGCTGCAGCA
G


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003160A_C01 KCC003160A_c01
         (481 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_187677.1| calcium-dependent protein kinase (CDPK)(CPK2) [...   147  5e-35
ref|NP_196107.1| calcium-dependent protein kinase (CDPK)(AK1) [A...   147  6e-35
emb|CAD70165.1| calcium-dependent protein kinase [Spirodela punc...   146  1e-34
dbj|BAA81748.1| calcium-dependent protein kinase [Marchantia pol...   143  1e-33
gb|AAL59948.1| putative calcium-dependent protein kinase [Arabid...   142  2e-33

>ref|NP_187677.1| calcium-dependent protein kinase (CDPK)(CPK2) [Arabidopsis
           thaliana] gi|1399271|gb|AAB03244.1| calmodulin-domain
           protein kinase CDPK isoform 2 [Arabidopsis thaliana]
           gi|8567800|gb|AAF76372.1| calmodulin-domain protein
           kinase CDPK isoform 2 [Arabidopsis thaliana]
           gi|9837343|gb|AAG00535.1|AF286222_1 calcium-dependent
           protein kinase isoform 2 [Arabidopsis thaliana]
           gi|12322803|gb|AAG51400.1|AC011560_32 calmodulin-domain
           protein kinase CDPK isoform 2; 13089-15758 [Arabidopsis
           thaliana]
          Length = 646

 Score =  147 bits (372), Expect = 5e-35
 Identities = 70/159 (44%), Positives = 109/159 (68%)
 Frame = +2

Query: 5   DVDLSAKPWPAISRHARHLVSRMLEKDPEQRIQLDQVLTHPWLRLDGTAPVRAVPTGVRD 184
           D+D S+ PWP+IS  A+ LV +ML +DP++R+   QVL HPW+++DG AP + + + V  
Sbjct: 402 DLDFSSDPWPSISESAKDLVRKMLVRDPKRRLTAHQVLCHPWVQIDGVAPDKPLDSAVLS 461

Query: 185 RVRQFRTLNLLKREARRVMAASLPPEEVAGLKNLFEELDANADGLVSLEDLVAGLARRGE 364
           R++QF  +N  K+ A RV+A SL  EE+AGLK +F+ +DA+  G ++ E+L AGL R G 
Sbjct: 462 RMKQFSAMNKFKKMALRVIAESLSEEEIAGLKQMFKMIDADNSGQITFEELKAGLKRVGA 521

Query: 365 ALAGEEAAALLRSMDLNGDGFIDYREFVAATYTLSKLQQ 481
            L   E   L+++ D++  G IDY+EF+AAT  L+K+++
Sbjct: 522 NLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIER 560

>ref|NP_196107.1| calcium-dependent protein kinase (CDPK)(AK1) [Arabidopsis thaliana]
           gi|729092|sp|Q06850|CDP1_ARATH Calcium-dependent protein
           kinase, isoform AK1 (CDPK) gi|477484|pir||A49082
           calcium-dependent protein kinase (EC 2.7.1.-) AK1 -
           Arabidopsis thaliana gi|304105|gb|AAA32761.1|
           calcium-dependent protein kinase
           gi|9758462|dbj|BAB08991.1| calcium-dependent protein
           kinase [Arabidopsis thaliana]
           gi|26452430|dbj|BAC43300.1| putative calcium-dependent
           protein kinase [Arabidopsis thaliana]
           gi|29028976|gb|AAO64867.1| At5g04870 [Arabidopsis
           thaliana]
          Length = 610

 Score =  147 bits (371), Expect = 6e-35
 Identities = 70/159 (44%), Positives = 108/159 (67%)
 Frame = +2

Query: 5   DVDLSAKPWPAISRHARHLVSRMLEKDPEQRIQLDQVLTHPWLRLDGTAPVRAVPTGVRD 184
           D+D S+ PWP+IS  A+ LV +ML +DP++R+   QVL HPW+++DG AP + + + V  
Sbjct: 366 DLDFSSDPWPSISESAKDLVRKMLVRDPKKRLTAHQVLCHPWVQVDGVAPDKPLDSAVLS 425

Query: 185 RVRQFRTLNLLKREARRVMAASLPPEEVAGLKNLFEELDANADGLVSLEDLVAGLARRGE 364
           R++QF  +N  K+ A RV+A SL  EE+AGLK +F  +DA+  G ++ E+L AGL R G 
Sbjct: 426 RMKQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGA 485

Query: 365 ALAGEEAAALLRSMDLNGDGFIDYREFVAATYTLSKLQQ 481
            L   E   L+++ D++  G IDY+EF+AAT  L+K+++
Sbjct: 486 NLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIER 524

>emb|CAD70165.1| calcium-dependent protein kinase [Spirodela punctata]
          Length = 548

 Score =  146 bits (368), Expect = 1e-34
 Identities = 69/159 (43%), Positives = 106/159 (66%)
 Frame = +2

Query: 5   DVDLSAKPWPAISRHARHLVSRMLEKDPEQRIQLDQVLTHPWLRLDGTAPVRAVPTGVRD 184
           D+D  + PWP+IS  A+ LVS+ML +DP++RI   QVL HPW+R+DG A  + + + V  
Sbjct: 317 DIDFQSDPWPSISASAKDLVSKMLTRDPKKRITAAQVLDHPWIRVDGEASDKPIDSAVLS 376

Query: 185 RVRQFRTLNLLKREARRVMAASLPPEEVAGLKNLFEELDANADGLVSLEDLVAGLARRGE 364
           R++QFR +N LK+ A +V+A SL  EE+ GL+ +F+ +D +  G ++ E+L  GLAR G 
Sbjct: 377 RMKQFRAMNKLKKMALKVIAESLSEEEIKGLRQMFQNMDTDQSGTITYEELKTGLARLGS 436

Query: 365 ALAGEEAAALLRSMDLNGDGFIDYREFVAATYTLSKLQQ 481
            L+  E   L+ + D++G+G IDY EF+ AT    KL++
Sbjct: 437 RLSEAEVKQLMDAADVDGNGSIDYIEFITATMHRHKLER 475

>dbj|BAA81748.1| calcium-dependent protein kinase [Marchantia polymorpha]
           gi|5162880|dbj|BAA81750.1| calcium-dependent protein
           kinase [Marchantia polymorpha]
          Length = 548

 Score =  143 bits (360), Expect = 1e-33
 Identities = 65/158 (41%), Positives = 107/158 (67%)
 Frame = +2

Query: 8   VDLSAKPWPAISRHARHLVSRMLEKDPEQRIQLDQVLTHPWLRLDGTAPVRAVPTGVRDR 187
           +D ++ PWP+IS+ A+ LV RML+++P++R+   +VL+HPW+ +DG AP + +   V  R
Sbjct: 298 IDFTSDPWPSISQKAKDLVKRMLKQNPKERLTAHEVLSHPWISVDGEAPDKPLDNAVLSR 357

Query: 188 VRQFRTLNLLKREARRVMAASLPPEEVAGLKNLFEELDANADGLVSLEDLVAGLARRGEA 367
           ++QF  +N LK+ A +V+A SL  EE+ GLK +F+ +D +  G ++ E+L  GL ++G  
Sbjct: 358 LKQFTAMNKLKKLALKVIAESLSEEEIMGLKEMFKSMDTDNSGTITFEELKDGLQKQGSN 417

Query: 368 LAGEEAAALLRSMDLNGDGFIDYREFVAATYTLSKLQQ 481
           LA  E   L+ + D++GDG IDY EF+ AT  L+K+ +
Sbjct: 418 LAESEVRQLMAAADVDGDGTIDYLEFITATMHLNKIDK 455

 Score = 33.9 bits (76), Expect = 1.0
 Identities = 17/55 (30%), Positives = 30/55 (53%)
 Frame = +2

Query: 287 FEELDANADGLVSLEDLVAGLARRGEALAGEEAAALLRSMDLNGDGFIDYREFVA 451
           F+  D +  G +++E+L   L + G     +    ++R +D + DG I+Y EFVA
Sbjct: 463 FQHFDGDNSGFITMEELEQALIKHGMG-DPDTLKEIIREVDTDHDGRINYDEFVA 516

>gb|AAL59948.1| putative calcium-dependent protein kinase [Arabidopsis thaliana]
          Length = 528

 Score =  142 bits (359), Expect = 2e-33
 Identities = 68/158 (43%), Positives = 104/158 (65%)
 Frame = +2

Query: 8   VDLSAKPWPAISRHARHLVSRMLEKDPEQRIQLDQVLTHPWLRLDGTAPVRAVPTGVRDR 187
           VD S+ PWP+IS  A+ LV +ML  DP+QR+   QVL HPW++ DG AP   +   V  R
Sbjct: 290 VDFSSDPWPSISPQAKDLVKKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSR 349

Query: 188 VRQFRTLNLLKREARRVMAASLPPEEVAGLKNLFEELDANADGLVSLEDLVAGLARRGEA 367
           ++QF+ +N  K+ A RV+A  L  EE+ GLK +F+ +D ++ G ++LE+L  GLA++G  
Sbjct: 350 LKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDSSGTITLEELRQGLAKQGTR 409

Query: 368 LAGEEAAALLRSMDLNGDGFIDYREFVAATYTLSKLQQ 481
           L+  E   L+ + D +G+G IDY EF+AAT  +++L +
Sbjct: 410 LSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDR 447

 Score = 32.0 bits (71), Expect = 3.9
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = +2

Query: 275 LKNLFEELDANADGLVSLEDLVAGLARRGEALAGEEAAALLRSMDLNGDGFIDYREFVA 451
           L + F+  D +  G +++E+L   L   G    G +   ++  +D + DG I+Y EFVA
Sbjct: 451 LYSAFQHFDKDNSGYITMEELEQALREFGMN-DGRDIKEIISEVDGDNDGRINYDEFVA 508



EST assemble image


clone accession position
1 LCL036c08_r AV628072 1 481
2 LCL027c10_r AV627476 143 443




Chlamydomonas reinhardtii
Kazusa DNA Research Institute