KCC003159A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003159A_C01 KCC003159A_c01
ctaagaCCTTCAGTTTCAGCAGTTTCGGCGCGACAACGGTAGCTCACAGGGAACCTAACC
ACTGCAACACTCGCGTGAACTCTGCCCGCCCTTGCACTTATACTACCATGGAGATGACCA
CGACCAAGGCCTCGGCACTGGTTGCTGATAGGCGCGCGGTCTGCAGGTCTGTCGCCAGCT
TCGCCCGCCCCGCGCGCCGCACCGCCACCCATGTTGTCAAGTTCAAGGAGATTGGCAAGC
AGGCGACCAGCCACCAGGCCACCACCGCCAAGCTGCTGTCCCGCCGCGGCTATGCTGCCA
CCGAACCCAATAAGCCGCTGAGCCCCTTCACCCACTCGGTGGGCGAGCTGGGACCCAGTG
AGATCGATATCAAGGTCACCCACAACGGCCTGTGCCACACGGACATCCACATGGCCATCA
ACGACTGGGGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003159A_C01 KCC003159A_c01
         (431 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P30359|CAD4_TOBAC Cinnamyl-alcohol dehydrogenase (CAD) gi|282...    57  6e-08
sp|P42495|CAD1_ARACO Cinnamyl-alcohol dehydrogenase 1 (CAD) gi|4...    57  8e-08
gb|AAK59401.1| alcohol dehydrogenase [Myxococcus xanthus]              55  2e-07
ref|NP_386798.1| PUTATIVE ZINC-TYPE ALCOHOL DEHYDROGENASE PROTEI...    55  2e-07
ref|ZP_00092492.1| COG1064: Zn-dependent alcohol dehydrogenases ...    55  2e-07

>sp|P30359|CAD4_TOBAC Cinnamyl-alcohol dehydrogenase (CAD) gi|282955|pir||S23525
           cinnamyl-alcohol dehydrogenase (EC 1.1.1.195) CAD14 -
           common tobacco gi|19839|emb|CAA44216.1| cinnamyl-alcohol
           dehydrogenase [Nicotiana tabacum]
          Length = 357

 Score = 57.0 bits (136), Expect = 6e-08
 Identities = 22/48 (45%), Positives = 35/48 (72%)
 Frame = +3

Query: 288 GYAATEPNKPLSPFTHSVGELGPSEIDIKVTHNGLCHTDIHMAINDWG 431
           G+AA +P+  LSP+T+++   GP ++++KV + GLCHTD+H   ND G
Sbjct: 12  GWAARDPSGVLSPYTYTLRNTGPEDVEVKVLYCGLCHTDLHQVKNDLG 59

>sp|P42495|CAD1_ARACO Cinnamyl-alcohol dehydrogenase 1 (CAD) gi|474300|dbj|BAA03099.1|
           cinnamyl alcohol dehydrogenase [Aralia cordata]
           gi|745086|prf||2015401A cinnamoyl alcohol dehydrogenase
          Length = 360

 Score = 56.6 bits (135), Expect = 8e-08
 Identities = 23/48 (47%), Positives = 35/48 (72%)
 Frame = +3

Query: 288 GYAATEPNKPLSPFTHSVGELGPSEIDIKVTHNGLCHTDIHMAINDWG 431
           G+AA +P+  LSP+T+++ E GP ++ IK+ + G+CHTDIH   ND G
Sbjct: 12  GWAARDPSGVLSPYTYTLRETGPEDVFIKIIYCGICHTDIHQIKNDLG 59

>gb|AAK59401.1| alcohol dehydrogenase [Myxococcus xanthus]
          Length = 349

 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 21/49 (42%), Positives = 33/49 (66%)
 Frame = +3

Query: 285 RGYAATEPNKPLSPFTHSVGELGPSEIDIKVTHNGLCHTDIHMAINDWG 431
           RGYAA +   PL+PF     E GPS++ I++ + G+CH+D+H   ++WG
Sbjct: 5   RGYAAQDAKSPLAPFQFERREPGPSDVQIEILYCGVCHSDLHQVRDEWG 53

>ref|NP_386798.1| PUTATIVE ZINC-TYPE ALCOHOL DEHYDROGENASE PROTEIN [Sinorhizobium
           meliloti] gi|15075716|emb|CAC47271.1| PUTATIVE ZINC-TYPE
           ALCOHOL DEHYDROGENASE PROTEIN [Sinorhizobium meliloti]
          Length = 347

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 23/49 (46%), Positives = 34/49 (68%)
 Frame = +3

Query: 285 RGYAATEPNKPLSPFTHSVGELGPSEIDIKVTHNGLCHTDIHMAINDWG 431
           RGYAAT+ +KPL+PFT    E    ++ I + + G+CH+DIH A ++WG
Sbjct: 5   RGYAATDASKPLAPFTFERREPRDDDVVIDIKYCGVCHSDIHQARDEWG 53

>ref|ZP_00092492.1| COG1064: Zn-dependent alcohol dehydrogenases [Azotobacter
           vinelandii]
          Length = 365

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 21/48 (43%), Positives = 33/48 (68%)
 Frame = +3

Query: 288 GYAATEPNKPLSPFTHSVGELGPSEIDIKVTHNGLCHTDIHMAINDWG 431
           GYAA   + PL+P+T    EL P ++ +++ + G+CH+D+H A NDWG
Sbjct: 19  GYAAYSTDSPLAPYTFERRELRPDDVALEILYCGVCHSDLHTARNDWG 66



EST assemble image


clone accession position
1 LCL075a04_r AV630186 1 431
2 MXL017b07_r BP094026 7 314
3 LCL026g10_r AV627441 9 356




Chlamydomonas reinhardtii
Kazusa DNA Research Institute