KCC003154A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003154A_C01 KCC003154A_c01
cagatgtccctgttctcgcgaactcgggcgcctacttgccccggcgctcggagggctcgg
ccgtcggcggtgcgcgttcaGGCGACTCTGCTGCCTCTGCCCGCCTCCGAGACCCGCTCC
ACCGTAGATAGGCTTAAGAAGCTTCGCCTTATTACTGCTATCAAGACGCCTTACCTTGCG
AACGGCAAATTTGACCTGCCTGCTTACGATGCACTGGTCTCGCACCAAATAGAGAACGGC
GTGGAAGGCCTCATCGTCGGCGGTACCACCGGCGAGGGCCATCTCATGTCCTGGGATGAG
CATGTTATGCTGATCGCGCACACGGTGAACGCATTCGGGGACAAAACTGCCGTCATCGGC
AACACCGGCTCCAACTCGACGCGCGAGGCCCTGCACGCGACGGAGCAGGGCTTTGCTGTC
GGTATGCACGCCTCGCTTCAGATTAACCCTTACTATGGCAAGACGAGCAAGGCGGGGCTG
CTGAACCACTTCAACGCGGTGCTGAACGAGGGGCCCGCGGTGGTGTACAACGTGCCCGGC
CGCACGGGGCAAGACATTCCCGATGACGTGGTCATGGAAATTTGCCAGCACAGCAACTTT
CTGGGCATGAAGGAGTGCACCGGCAACTCCCGGATTA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003154A_C01 KCC003154A_c01
         (637 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|Q39535|DAPA_COILA Dihydrodipicolinate synthase, chloroplast p...   258  4e-68
sp|Q42948|DAPA_TOBAC Dihydrodipicolinate synthase, chloroplast p...   258  4e-68
gb|AAG28565.1|AF200325_1 dihydrodipicolinate synthase 2 [Arabido...   258  5e-68
ref|NP_182068.1| dihydrodipicolinate synthase -related [Arabidop...   258  5e-68
pir||WZZMP dihydrodipicolinate synthase (EC 4.2.1.52) precursor ...   257  1e-67

>sp|Q39535|DAPA_COILA Dihydrodipicolinate synthase, chloroplast precursor (DHDPS)
           gi|1432156|gb|AAB04021.1| dihydrodipicolinate synthase
           [Coix lacryma-jobi]
          Length = 377

 Score =  258 bits (660), Expect = 4e-68
 Identities = 126/212 (59%), Positives = 162/212 (75%), Gaps = 2/212 (0%)
 Frame = +1

Query: 7   SLFSRTRAPTCPGARRARPSAVRVQATLLPLPASET--RSTVDRLKKLRLITAIKTPYLA 180
           S+ +R R P+  G  R + SA+ +    LP+ ++E   R++ D +  LRLITA+KTPYL 
Sbjct: 33  SVAARPRRPSS-GTGRGKVSAITLD-DYLPMRSTEVKNRTSTDDITSLRLITAVKTPYLP 90

Query: 181 NGKFDLPAYDALVSHQIENGVEGLIVGGTTGEGHLMSWDEHVMLIAHTVNAFGDKTAVIG 360
           +G+FDL AYD+L++ QIE G EG+IVGGTTGEGHLMSWDEH+MLI HTVN FG +  VIG
Sbjct: 91  DGRFDLEAYDSLINMQIEGGAEGVIVGGTTGEGHLMSWDEHIMLIGHTVNCFGSRIKVIG 150

Query: 361 NTGSNSTREALHATEQGFAVGMHASLQINPYYGKTSKAGLLNHFNAVLNEGPAVVYNVPG 540
           NTGSNSTREA+HATEQGFAVGMHA+L INPYYGKTS  G+++HF +VL  GP ++YNVP 
Sbjct: 151 NTGSNSTREAVHATEQGFAVGMHAALHINPYYGKTSTEGMISHFESVLPMGPTIIYNVPS 210

Query: 541 RTGQDIPDDVVMEICQHSNFLGMKECTGNSRI 636
           R+ QDIP +V++ I  + N  G+KEC G+ RI
Sbjct: 211 RSAQDIPPEVIVAISGYINMAGVKECIGHERI 242

>sp|Q42948|DAPA_TOBAC Dihydrodipicolinate synthase, chloroplast precursor (DHDPS)
           gi|7436660|pir||T03214 dihydrodipicolinate synthase (EC
           4.2.1.52) precursor, chloroplast [validated] - common
           tobacco gi|1213069|emb|CAA56123.1| dihydrodipicolinate
           synthase [Nicotiana tabacum]
          Length = 359

 Score =  258 bits (660), Expect = 4e-68
 Identities = 125/194 (64%), Positives = 149/194 (76%), Gaps = 2/194 (1%)
 Frame = +1

Query: 61  PSAVRVQATLLPLPASET--RSTVDRLKKLRLITAIKTPYLANGKFDLPAYDALVSHQIE 234
           P A  + +  LP+ ++E   R+  D +K LRLITAIKTPYL +G+FDL AYD LV+ QIE
Sbjct: 31  PRAAVIPSFHLPMRSNEVKNRTFADDIKALRLITAIKTPYLPDGRFDLEAYDTLVNLQIE 90

Query: 235 NGVEGLIVGGTTGEGHLMSWDEHVMLIAHTVNAFGDKTAVIGNTGSNSTREALHATEQGF 414
           NG EG+IVGGTTGEG LMSWDEH+MLI HTVN FG    VIGNTGSNSTREA+HATEQGF
Sbjct: 91  NGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGF 150

Query: 415 AVGMHASLQINPYYGKTSKAGLLNHFNAVLNEGPAVVYNVPGRTGQDIPDDVVMEICQHS 594
           AVGMHA+L INPYYGKTS  GL++HF +VL  GP ++YNVP RTGQDIP  V+  + +  
Sbjct: 151 AVGMHAALHINPYYGKTSLEGLISHFESVLPMGPTIIYNVPSRTGQDIPPRVIQTMAKSP 210

Query: 595 NFLGMKECTGNSRI 636
           N  G+KEC GN R+
Sbjct: 211 NLAGVKECVGNDRV 224

>gb|AAG28565.1|AF200325_1 dihydrodipicolinate synthase 2 [Arabidopsis thaliana]
          Length = 365

 Score =  258 bits (659), Expect = 5e-68
 Identities = 125/194 (64%), Positives = 149/194 (76%), Gaps = 2/194 (1%)
 Frame = +1

Query: 61  PSAVRVQATLLPLPASET--RSTVDRLKKLRLITAIKTPYLANGKFDLPAYDALVSHQIE 234
           P A  V    LP+ + E   R+  D +K LR+ITAIKTPYL +G+FDL AYD LV+ QI+
Sbjct: 37  PKAAVVPNFHLPMRSLEVKNRTNTDDIKALRVITAIKTPYLPDGRFDLEAYDDLVNIQIQ 96

Query: 235 NGVEGLIVGGTTGEGHLMSWDEHVMLIAHTVNAFGDKTAVIGNTGSNSTREALHATEQGF 414
           NG EG+IVGGTTGEG LMSWDEH+MLI HTVN FG    VIGNTGSNSTREA+HATEQGF
Sbjct: 97  NGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGF 156

Query: 415 AVGMHASLQINPYYGKTSKAGLLNHFNAVLNEGPAVVYNVPGRTGQDIPDDVVMEICQHS 594
           AVGMHA+L INPYYGKTS  GL+ HF +VL+ GP ++YNVPGRTGQDIP   + ++ Q+ 
Sbjct: 157 AVGMHAALHINPYYGKTSIEGLIAHFQSVLHMGPTIIYNVPGRTGQDIPPRAIFKLSQNP 216

Query: 595 NFLGMKECTGNSRI 636
           N  G+KEC GN R+
Sbjct: 217 NLAGVKECVGNKRV 230

>ref|NP_182068.1| dihydrodipicolinate synthase -related [Arabidopsis thaliana]
           gi|14547964|sp|Q9FVC8|DAP2_ARATH Dihydrodipicolinate
           synthase 2, chloroplast precursor (DHDPS 2)
           gi|25291194|pir||E84890 probable dihydrodipicolinate
           synthase [imported] - Arabidopsis thaliana
           gi|2583111|gb|AAB82620.1| putative dihydrodipicolinate
           synthase [Arabidopsis thaliana]
           gi|28466961|gb|AAO44089.1| At2g45440 [Arabidopsis
           thaliana]
          Length = 365

 Score =  258 bits (659), Expect = 5e-68
 Identities = 125/194 (64%), Positives = 149/194 (76%), Gaps = 2/194 (1%)
 Frame = +1

Query: 61  PSAVRVQATLLPLPASET--RSTVDRLKKLRLITAIKTPYLANGKFDLPAYDALVSHQIE 234
           P A  V    LP+ + E   R+  D +K LR+ITAIKTPYL +G+FDL AYD LV+ QI+
Sbjct: 37  PKAAVVPNFHLPMRSLEVKNRTNTDDIKALRVITAIKTPYLPDGRFDLEAYDDLVNIQIQ 96

Query: 235 NGVEGLIVGGTTGEGHLMSWDEHVMLIAHTVNAFGDKTAVIGNTGSNSTREALHATEQGF 414
           NG EG+IVGGTTGEG LMSWDEH+MLI HTVN FG    VIGNTGSNSTREA+HATEQGF
Sbjct: 97  NGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGF 156

Query: 415 AVGMHASLQINPYYGKTSKAGLLNHFNAVLNEGPAVVYNVPGRTGQDIPDDVVMEICQHS 594
           AVGMHA+L INPYYGKTS  GL+ HF +VL+ GP ++YNVPGRTGQDIP   + ++ Q+ 
Sbjct: 157 AVGMHAALHINPYYGKTSIEGLIAHFQSVLHMGPTIIYNVPGRTGQDIPPRAIFKLSQNP 216

Query: 595 NFLGMKECTGNSRI 636
           N  G+KEC GN R+
Sbjct: 217 NLAGVKECVGNKRV 230

>pir||WZZMP dihydrodipicolinate synthase (EC 4.2.1.52) precursor [validated] -
           maize gi|1638871|emb|CAA37038.1| dihydrodipicolinate
           [Zea mays]
          Length = 380

 Score =  257 bits (656), Expect = 1e-67
 Identities = 118/184 (64%), Positives = 150/184 (81%), Gaps = 2/184 (1%)
 Frame = +1

Query: 91  LPLPASET--RSTVDRLKKLRLITAIKTPYLANGKFDLPAYDALVSHQIENGVEGLIVGG 264
           LP+ ++E   R++ D + +LRLITA+KTPYL +G+FDL AYD+L++ QIE G EG+IVGG
Sbjct: 62  LPMRSTEVKNRTSTDDITRLRLITAVKTPYLPDGRFDLEAYDSLINMQIEGGAEGVIVGG 121

Query: 265 TTGEGHLMSWDEHVMLIAHTVNAFGDKTAVIGNTGSNSTREALHATEQGFAVGMHASLQI 444
           TTGEGHLMSWDEH+MLI HTVN FG +  VIGNTGSNSTREA+HATEQGFAVGMHA+L I
Sbjct: 122 TTGEGHLMSWDEHIMLIGHTVNCFGSRIKVIGNTGSNSTREAVHATEQGFAVGMHAALHI 181

Query: 445 NPYYGKTSKAGLLNHFNAVLNEGPAVVYNVPGRTGQDIPDDVVMEICQHSNFLGMKECTG 624
           NPYYGKTS  G+++HF AVL  GP ++YNVP R+ QDIP +V++ I  ++N  G+KEC G
Sbjct: 182 NPYYGKTSAEGMISHFEAVLPMGPTIIYNVPSRSAQDIPPEVILAISGYTNMAGVKECVG 241

Query: 625 NSRI 636
           + R+
Sbjct: 242 HERV 245



EST assemble image


clone accession position
1 MXL035c03_r BP095065 1 505
2 LCL026d09_r AV627419 232 637




Chlamydomonas reinhardtii
Kazusa DNA Research Institute