Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003140A_C01 KCC003140A_c01
(557 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00024899.1| COG3181: Uncharacterized protein conserved in... 37 0.18
ref|NP_033911.1| calcium channel, voltage-dependent, L type, alp... 36 0.40
ref|XP_293095.2| hypothetical protein XP_293095 [Homo sapiens] 35 0.52
gi|33694820 TPA: 100K [Simian adenovirus 25] 35 0.52
ref|NP_697636.1| AP endonuclease family 1 domain protein [Brucel... 35 0.68
>ref|ZP_00024899.1| COG3181: Uncharacterized protein conserved in bacteria [Ralstonia
metallidurans]
Length = 457
Score = 37.0 bits (84), Expect = 0.18
Identities = 28/85 (32%), Positives = 33/85 (37%), Gaps = 11/85 (12%)
Frame = -1
Query: 557 WPTECPRSSPCP*WSSPLCPNRTRRRR*RRPTPA-----------RPLPLLPVHGARAGS 411
W T ++P P W P TRRR R PA +P HG
Sbjct: 14 WLTTRAGANPIPAW-----PCTTRRRWSARARPACRSACCRSGAGNAVP----HGGSMTG 64
Query: 410 PLLAVYAGCQSDRWLSNTSPASGSR 336
P GC+S RW N SP SG+R
Sbjct: 65 PTSCSCRGCRSIRWCDNRSPVSGAR 89
>ref|NP_033911.1| calcium channel, voltage-dependent, L type, alpha 1C subunit;
(alpha)1 subunit [Mus musculus]
gi|6165982|sp|Q01815|CCAC_MOUSE Voltage-dependent L-type
calcium channel alpha-1C subunit (Calcium channel, L
type, alpha-1 polypeptide, isoform 1, cardiac muscle)
(Mouse brain class C) (MBC) (MELC-CC)
gi|346902|pir||A44467 voltage-dependent calcium channel
complex alpha-1 chain mbC - mouse
gi|192960|gb|AAB59633.1| L-type calcium channel alpha-1
Length = 2139
Score = 35.8 bits (81), Expect = 0.40
Identities = 23/72 (31%), Positives = 31/72 (42%)
Frame = -1
Query: 554 PTECPRSSPCP*WSSPLCPNRTRRRR*RRPTPARPLPLLPVHGARAGSPLLAVYAGCQSD 375
PT PR PCP + P+ P R P RP+P L + GA + L + +
Sbjct: 1944 PTTFPR--PCP--TPPVTPGSRGR-------PLRPIPTLRLEGAESSEKLNSSFPSIHCS 1992
Query: 374 RWLSNTSPASGS 339
W T+ SGS
Sbjct: 1993 SWSEETTACSGS 2004
>ref|XP_293095.2| hypothetical protein XP_293095 [Homo sapiens]
Length = 114
Score = 35.4 bits (80), Expect = 0.52
Identities = 21/49 (42%), Positives = 26/49 (52%), Gaps = 4/49 (8%)
Frame = +3
Query: 420 SGTMHWKERKW---AGWC-RPASSPPACPVWTQRTRPSRTRAAARAFCW 554
+G WK RK +GWC +PAS+P W T RTR+A A CW
Sbjct: 12 AGLQLWKRRKLNLLSGWCLQPASAPSWRLCWCSSTWARRTRSACGA-CW 59
>gi|33694820 TPA: 100K [Simian adenovirus 25]
Length = 804
Score = 35.4 bits (80), Expect = 0.52
Identities = 21/50 (42%), Positives = 24/50 (48%)
Frame = +1
Query: 394 YTARSGLPALAPCTGRRGSGRAGVGRRHRRLRVLFGHSGLDHHGQGLLRG 543
++ R G PA GRRG GR G GR RR V+ G HG L G
Sbjct: 748 HSGRGGQPA-RQSGGRRGGGRGGGGRSSRRQTVVLGGGESKQHGYHLRSG 796
>ref|NP_697636.1| AP endonuclease family 1 domain protein [Brucella suis 1330]
gi|23347417|gb|AAN29551.1|AE014370_5 AP endonuclease
family 1 domain protein [Brucella suis 1330]
Length = 322
Score = 35.0 bits (79), Expect = 0.68
Identities = 28/75 (37%), Positives = 36/75 (47%), Gaps = 10/75 (13%)
Frame = -3
Query: 510 SAVSKQDTQ-AAMTPADTSPPTSSPSSAWCQSRKPASCRVCGLPV------GSLAFKHFT 352
SA +K+ + AAMTPA + PT W R PAS R GLP+ G +A T
Sbjct: 242 SATTKRIAELAAMTPAPPTGPT------WLYRRLPASLRFAGLPIDQTFAKGRVAISKIT 295
Query: 351 ---SVGKSSLKVLVQ 316
+G L VLV+
Sbjct: 296 RQQPIGSDHLPVLVE 310
