Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003138A_C01 KCC003138A_c01
(546 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAH58773.1| Stard10 protein [Mus musculus] 42 0.004
pir||S50754 hypothetical protein WP6 - Chlamydomonas eugametos g... 39 0.035
pir||T18535 high molecular mass nuclear antigen - chicken (fragm... 38 0.077
dbj|BAB22087.1| unnamed protein product [Mus musculus] 37 0.17
dbj|BAB24344.1| unnamed protein product [Mus musculus] 37 0.17
>gb|AAH58773.1| Stard10 protein [Mus musculus]
Length = 384
Score = 42.4 bits (98), Expect = 0.004
Identities = 42/128 (32%), Positives = 56/128 (42%), Gaps = 17/128 (13%)
Frame = +2
Query: 164 RSGMWTLRGGRQAWTGPQRSQPQHQATGCPRPVAVHSAAVNVLASTKPTEGSSTTG---- 331
R G GG +A T P + P +A PR VA SAA + L+ S T
Sbjct: 29 RPGSGGSGGGGRART-PAPAGPGREARTGPRKVASASAAASTLSEPPRRTQESRTRTRAP 87
Query: 332 --PKQVVAKPAKVSVPRGS---FGRAEDQLVTP------RSSVDSNVDW--FYSEAAQKE 472
P + KPA + P+GS GR Q+ RS ++ V W YS+A
Sbjct: 88 GLPTLPMEKPAASTEPQGSRPALGRESVQVPDDQDFRSFRSECEAEVGWNLTYSKAGVSV 147
Query: 473 WVQAMELD 496
WVQA+E+D
Sbjct: 148 WVQAVEMD 155
>pir||S50754 hypothetical protein WP6 - Chlamydomonas eugametos
gi|530878|gb|AAB53954.1| amino acid feature:
N-glycosylation sites, aa 41 .. 43, 46 .. 48, 51 .. 53,
72 .. 74, 107 .. 109, 128 .. 130, 132 .. 134, 158 ..
160, 163 .. 165; amino acid feature: Rod protein domain,
aa 169 .. 340; amino acid feature: globular protein
domain, aa 32 .. 168
Length = 351
Score = 39.3 bits (90), Expect = 0.035
Identities = 33/98 (33%), Positives = 40/98 (40%), Gaps = 11/98 (11%)
Frame = -2
Query: 536 PSP*AAAACRESACPTPWPGPTPSERPPSRTSPHCYPRSSAV*QAGPQLA-----QTSPW 372
PSP A+ PTP P P+P+ P SP P SA A P L+ T P
Sbjct: 228 PSPKASPVASPQQSPTPSPRPSPTPSPTPSPSPKASPPPSASPSASPSLSPKVSPSTPPT 287
Query: 371 GLRL*LVS-----RQPAWGQSLMSPPLA-SWTPERSPL 276
G S P G MSP L+ + P RSP+
Sbjct: 288 GSPAASPSGSPRASPPGGGPPAMSPRLSPTIPPTRSPI 325
Score = 33.9 bits (76), Expect = 1.5
Identities = 27/78 (34%), Positives = 38/78 (48%)
Frame = -2
Query: 503 SACPTPWPGPTPSERPPSRTSPHCYPRSSAV*QAGPQLAQTSPWGLRL*LVSRQPAWGQS 324
S P+P P P+PS P + SP P++S P+ A SP S QP+ S
Sbjct: 173 SPSPSPSPSPSPSPSPSPKASPSPSPKASP--SPSPK-ASPSPSPKASPAPSPQPSPTPS 229
Query: 323 LMSPPLASWTPERSPLQS 270
+ P+AS P++SP S
Sbjct: 230 PKASPVAS--PQQSPTPS 245
Score = 33.9 bits (76), Expect = 1.5
Identities = 34/114 (29%), Positives = 48/114 (41%), Gaps = 1/114 (0%)
Frame = -2
Query: 536 PSP*AAAACRESACPTPWPGPTPSERPPSRTSPHCYPRSSAV*QAGPQLA-QTSPWGLRL 360
PSP A+ + A P+P P +PS P + +P P + +A P + Q SP
Sbjct: 188 PSPKASPSPSPKASPSPSPKASPSPSPKASPAPSPQPSPTPSPKASPVASPQQSP----- 242
Query: 359 *LVSRQPAWGQSLMSPPLASWTPERSPLQSAQLLAVDSLLLGVEAATAEAPSTP 198
P+ S P S +P+ SP SA A SL + +PSTP
Sbjct: 243 -----TPSPRPSPTPSPTPSPSPKASPPPSASPSASPSL------SPKVSPSTP 285
>pir||T18535 high molecular mass nuclear antigen - chicken (fragment)
gi|2754696|dbj|BAA24137.1| high molecular mass nuclear
antigen [Gallus gallus]
Length = 1151
Score = 38.1 bits (87), Expect = 0.077
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 18/130 (13%)
Frame = -2
Query: 536 PSP*AAAACRESACP-------TPWPGPTPSERPP--SRTSPHCYPRSSAV*QAGPQLAQ 384
PSP AAA + +A +P TP + P + T+P P +A P A
Sbjct: 784 PSPMGAAATQVTATSAGNTMQVSPMGAATPPQTPSVGAATTPQPSPMGAATTLMSPMGAA 843
Query: 383 TSPWGLRL*LVSRQP---AWGQSLMSPPLASWTPERSPL------QSAQLLAVDSLLLGV 231
T+P + V+ QP A + PP+A+ TP+ +P+ QS + A + +
Sbjct: 844 TTPQPSPMGAVTTQPPPMAATNTTQPPPMAASTPQSTPMGAATTTQSPPMGATTTQSPPM 903
Query: 230 EAATAEAPST 201
A+T +AP T
Sbjct: 904 GASTPQAPPT 913
>dbj|BAB22087.1| unnamed protein product [Mus musculus]
Length = 131
Score = 37.0 bits (84), Expect = 0.17
Identities = 33/110 (30%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
Frame = -2
Query: 500 ACPTPWPGPTPSERPPSRTSPHCYPRSSAV*QAGPQLAQTSPWG--LRL*LVSRQPAWG- 330
AC P P P P SR P C P+ + +A P+ Q WG L+ + P W
Sbjct: 12 ACDRPCPAPG---LPRSREGPGCAPKLPSPGRAAPRSGQLKSWGDLLQAGSIRHPPRWSL 68
Query: 329 ---QSLMSPPLASWTPERSPLQSAQLLAVDSLLLGVEAATAEAPSTPVYH 189
S PL W P R V S L V ++++AP T H
Sbjct: 69 QPVTSFSLRPL--WIPRR----------VRSPLCLVPGSSSKAPPTKALH 106
>dbj|BAB24344.1| unnamed protein product [Mus musculus]
Length = 129
Score = 37.0 bits (84), Expect = 0.17
Identities = 33/110 (30%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
Frame = -2
Query: 500 ACPTPWPGPTPSERPPSRTSPHCYPRSSAV*QAGPQLAQTSPWG--LRL*LVSRQPAWG- 330
AC P P P P SR P C P+ + +A P+ Q WG L+ + P W
Sbjct: 10 ACDRPCPAPG---LPRSREGPGCAPKLPSPGRAAPRSGQLKSWGDLLQAGSIRHPPRWSL 66
Query: 329 ---QSLMSPPLASWTPERSPLQSAQLLAVDSLLLGVEAATAEAPSTPVYH 189
S PL W P R V S L V ++++AP T H
Sbjct: 67 QPVTSFSLRPL--WIPRR----------VRSPLCLVPGSSSKAPPTKALH 104
