KCC003137A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003137A_C01 KCC003137A_c01
cgtgaggtgctggaggaggggctgggctgccccgtggaccgcgtgttcgagtggctgtcc
gccgagCCGCTGGCCGCGGCCTCGCTGGGCCAGGTGTACCGCGGCAAGCTGCGGCCCGAG
CACGGCGGCGCCGAGGTGGCCGTCAAGGTGCAGCGGCCGCAGGTGCTGGAGACCGTGGCG
CTGGACATCTTCATCATGCGCCGCTTCGTGGTGCTGCTGAGCACGCTGCCGTTCATGAGC
GACCAGTGGGCGGTGGTGCTGGACGACTGGGGCACCCGCTTCTTCGAGGAGATGGACTAC
CAGCTGGAGGCCTACAACACGATGACCTTCAAGAAGCAGATGGCCTCGCTGCAGGGCATC
TCCGTCGCCACCGTGTACCCCGAGCTGACCAGCCGCAAGGTCATCGT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003137A_C01 KCC003137A_c01
         (407 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_566745.1| expressed protein [Arabidopsis thaliana] gi|119...   104  3e-22
ref|NP_565025.1| expressed protein [Arabidopsis thaliana] gi|145...   103  4e-22
pir||F96740 hypothetical protein F14O23.19 [imported] - Arabidop...   103  4e-22
ref|NP_896096.1| possible protein kinase:ABC1 family [Prochloroc...   102  1e-21
ref|ZP_00105662.1| COG0661: Predicted unusual protein kinase [No...   101  2e-21

>ref|NP_566745.1| expressed protein [Arabidopsis thaliana]
           gi|11994238|dbj|BAB01360.1| gene_id:MUJ8.9~similar to
           unknown protein~sp|Q55680 [Arabidopsis thaliana]
           gi|15294250|gb|AAK95302.1|AF410316_1 AT3g24190/MUJ8_17
           [Arabidopsis thaliana] gi|21360391|gb|AAM47311.1|
           AT3g24190/MUJ8_17 [Arabidopsis thaliana]
          Length = 793

 Score =  104 bits (259), Expect = 3e-22
 Identities = 61/134 (45%), Positives = 82/134 (60%), Gaps = 1/134 (0%)
 Frame = +1

Query: 7   VLEEGLGCPVDRVFEWLSAEPLAAASLGQVYRGKLRPEHGGAEVAVKVQRPQVLETVALD 186
           ++EE LG P   V+  LS  P+AAASLGQVY+G+L+    G  VAVKVQRP VLETV +D
Sbjct: 246 LIEEELGKPWYDVYSELSPSPIAAASLGQVYKGRLK--ENGDLVAVKVQRPFVLETVTVD 303

Query: 187 IFIMRRFVVLLSTLPFMSDQWAVVLDDWGTRFFEEMDYQLEAYNTMTFKKQM-ASLQGIS 363
           +F++R   + L   P +S     ++D+W  RFFEE+DY  E  N   F + M   L  + 
Sbjct: 304 LFVIRNLGLFLRKFPQVSVDVVGLVDEWAARFFEELDYVNEGENGTYFAEMMKKDLPQVV 363

Query: 364 VATVYPELTSRKVI 405
           V   Y + TSRKV+
Sbjct: 364 VPKTYQKYTSRKVL 377

>ref|NP_565025.1| expressed protein [Arabidopsis thaliana] gi|14532544|gb|AAK64000.1|
           At1g71810/F14O23_17 [Arabidopsis thaliana]
           gi|20334812|gb|AAM16267.1| At1g71810/F14O23_17
           [Arabidopsis thaliana]
          Length = 692

 Score =  103 bits (258), Expect = 4e-22
 Identities = 55/133 (41%), Positives = 80/133 (59%)
 Frame = +1

Query: 7   VLEEGLGCPVDRVFEWLSAEPLAAASLGQVYRGKLRPEHGGAEVAVKVQRPQVLETVALD 186
           ++E+ LG P+D +F  +S EP+AAASLGQVY+ +LR    G  VAVKVQRP V   +ALD
Sbjct: 174 MIEDELGLPIDELFSEISPEPVAAASLGQVYQARLR--RSGKVVAVKVQRPGVRAAIALD 231

Query: 187 IFIMRRFVVLLSTLPFMSDQWAVVLDDWGTRFFEEMDYQLEAYNTMTFKKQMASLQGISV 366
             I+R    L+      +     V+D+W T  F+EMDY  EA N + F+K    ++ + V
Sbjct: 232 TLILRYIAGLIKKAGRFNSDLEAVVDEWATSLFKEMDYLNEAQNGIKFRKLYGGIKDVLV 291

Query: 367 ATVYPELTSRKVI 405
             +Y E ++ KV+
Sbjct: 292 PKMYTEYSTSKVL 304

>pir||F96740 hypothetical protein F14O23.19 [imported] - Arabidopsis thaliana
           gi|7239508|gb|AAF43234.1|AC012654_18 EST gb|AI998820
           comes from this gene. [Arabidopsis thaliana]
          Length = 649

 Score =  103 bits (258), Expect = 4e-22
 Identities = 55/133 (41%), Positives = 80/133 (59%)
 Frame = +1

Query: 7   VLEEGLGCPVDRVFEWLSAEPLAAASLGQVYRGKLRPEHGGAEVAVKVQRPQVLETVALD 186
           ++E+ LG P+D +F  +S EP+AAASLGQVY+ +LR    G  VAVKVQRP V   +ALD
Sbjct: 174 MIEDELGLPIDELFSEISPEPVAAASLGQVYQARLR--RSGKVVAVKVQRPGVRAAIALD 231

Query: 187 IFIMRRFVVLLSTLPFMSDQWAVVLDDWGTRFFEEMDYQLEAYNTMTFKKQMASLQGISV 366
             I+R    L+      +     V+D+W T  F+EMDY  EA N + F+K    ++ + V
Sbjct: 232 TLILRYIAGLIKKAGRFNSDLEAVVDEWATSLFKEMDYLNEAQNGIKFRKLYGGIKDVLV 291

Query: 367 ATVYPELTSRKVI 405
             +Y E ++ KV+
Sbjct: 292 PKMYTEYSTSKVL 304

>ref|NP_896096.1| possible protein kinase:ABC1 family [Prochlorococcus marinus str.
           MIT 9313] gi|33641316|emb|CAE22446.1| possible protein
           kinase:ABC1 family [Prochlorococcus marinus str. MIT
           9313]
          Length = 629

 Score =  102 bits (254), Expect = 1e-21
 Identities = 56/133 (42%), Positives = 83/133 (62%), Gaps = 1/133 (0%)
 Frame = +1

Query: 10  LEEGLGCPVDRVFEWLSAEPLAAASLGQVYRGKLRPEHGGAEVAVKVQRPQVLETVALDI 189
           +EE L  P++ ++E L  EP++AASLGQV+RG L+   GG +VAVKVQRP + E + LD+
Sbjct: 132 IEEDLETPIEEIYEQLDKEPISAASLGQVHRGVLK---GGQQVAVKVQRPGLREQITLDL 188

Query: 190 FIMRRFVVLL-STLPFMSDQWAVVLDDWGTRFFEEMDYQLEAYNTMTFKKQMASLQGISV 366
           +I+R     L S +  +      ++D+ G R FEEMDY  EA N   F+   +  Q I+V
Sbjct: 189 YIVRNIAAWLKSNVRLIRSDLVALIDELGRRVFEEMDYLNEAANAERFRTLHSHNQRIAV 248

Query: 367 ATVYPELTSRKVI 405
             +Y + TSR+V+
Sbjct: 249 PIIYRQATSRRVL 261

>ref|ZP_00105662.1| COG0661: Predicted unusual protein kinase [Nostoc punctiforme]
          Length = 415

 Score =  101 bits (252), Expect = 2e-21
 Identities = 56/135 (41%), Positives = 83/135 (61%), Gaps = 1/135 (0%)
 Frame = +1

Query: 4   EVLEEGLGCPVDRVFEWLSAEPLAAASLGQVYRGKLRPEHGGAEVAVKVQRPQVLETVAL 183
           + ++E LG P + V+  LSA+P+AAASLGQVY+GKL+    G EVAVKVQRP + E + +
Sbjct: 173 QFIQEELGAPPEEVYAELSAQPIAAASLGQVYKGKLK---SGEEVAVKVQRPDLRERITI 229

Query: 184 DIFIMRRFVV-LLSTLPFMSDQWAVVLDDWGTRFFEEMDYQLEAYNTMTFKKQMASLQGI 360
           D++I+R     +  T+  +      +LD+ G R FEEMDY  E  N   F +    ++ I
Sbjct: 230 DLYILRNIAAWVQKTVKRVRSDLVGILDELGDRIFEEMDYIHEGENAERFFELYGHIKDI 289

Query: 361 SVATVYPELTSRKVI 405
            V  +Y E T+R+V+
Sbjct: 290 YVPKIYWEYTNRRVL 304



EST assemble image


clone accession position
1 LCL069c09_r AV629929 1 407
2 LCL021d12_r AV627123 67 265




Chlamydomonas reinhardtii
Kazusa DNA Research Institute