KCC003134A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003134A_C01 KCC003134A_c01
ttaccggcatattgtattattcgaaacccaatacatGCAATACAGGCAAGCATACAGTGC
ACACCGTCCTATAGACACGCGCTAGGCGACTCAAAACCTGATGTAAGCAGCTTTAAATAT
GGTCGCATCATTAGTATGCTTAGAAGATGCGGGCGCTCGCGCCGATGCTGCGCGCGAAAC
GTCGGGACAGATCGCTGCGTTGCTCGCGCAAATTTCCGACTTCAAGGTAGAAGGCCAAAC
CGTATCACAAACGCAGCTGCATACAGCTGCTGAGCAGGCCTTGGCTCTGCTTGGCCCCGT
GTGGCCGAAGCTCGTGGAGGGGCTGGGTGGTGCCGAGAGACAGGCCGCGCTACTCGAGCA
GCAGAGTCAGCTGGCCGCAGATGCCGCACAGCTGCTGAA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003134A_C01 KCC003134A_c01
         (399 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P14328|SP96_DICDI Spore coat protein SP96 gi|84145|pir||S0763...    39  0.013
gb|AAO50776.1| similar to Dictyostelium discoideum (Slime mold)....    39  0.013
ref|XP_311331.1| ENSANGP00000001657 [Anopheles gambiae] gi|30177...    38  0.030
gb|AAK30600.1|AF350271_1 fibroin 1 [Euagrus chisoseus]                 37  0.086
ref|NP_785935.1| cell surface protein precursor, GY family [Lact...    36  0.11

>sp|P14328|SP96_DICDI Spore coat protein SP96 gi|84145|pir||S07638 spore coat protein
           SP96 precursor - slime mold  (Dictyostelium discoideum)
           gi|295736|emb|CAA34508.1| spore coat protein sp96
           [Dictyostelium discoideum]
          Length = 600

 Score = 39.3 bits (90), Expect = 0.013
 Identities = 27/92 (29%), Positives = 48/92 (51%)
 Frame = -1

Query: 396 SSCAASAAS*LCCSSSAACLSAPPSPSTSFGHTGPSRAKACSAAVCSCVCDTVWPSTLKS 217
           SS A+S+ S    SSS +  +A  SPS+S   + PS + + S++  S    +  PS+  S
Sbjct: 453 SSAASSSPSSSAASSSPSSSAASSSPSSSAASSSPSSSASSSSSPSSSASSSSAPSSSAS 512

Query: 216 EICASNAAICPDVSRAASARAPASSKHTNDAT 121
              A +++     + ++SA + A++  T  AT
Sbjct: 513 SSSAPSSSASSSSASSSSASSAATTAATTIAT 544

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 29/97 (29%), Positives = 50/97 (50%)
 Frame = -1

Query: 396 SSCAASAAS*LCCSSSAACLSAPPSPSTSFGHTGPSRAKACSAAVCSCVCDTVWPSTLKS 217
           S+ ++SA+     SSS +  +A  SPS+S   + PS + A S++  S    +  PS+  S
Sbjct: 444 SAVSSSASGSSAASSSPSSSAASSSPSSSAASSSPS-SSAASSSPSSSASSSSSPSSSAS 502

Query: 216 EICASNAAICPDVSRAASARAPASSKHTNDATIFKAA 106
              A +       S A+S+ AP+SS  ++ A+   A+
Sbjct: 503 SSSAPS-------SSASSSSAPSSSASSSSASSSSAS 532

 Score = 30.0 bits (66), Expect = 8.1
 Identities = 28/91 (30%), Positives = 45/91 (48%)
 Frame = -1

Query: 396 SSCAASAAS*LCCSSSAACLSAPPSPSTSFGHTGPSRAKACSAAVCSCVCDTVWPSTLKS 217
           SS ++SA+S    SSSA+  SAP S ++S   + PS + + S+A  S        +T  +
Sbjct: 485 SSPSSSASSSSSPSSSASSSSAPSSSASS--SSAPSSSASSSSASSSSASSA---ATTAA 539

Query: 216 EICASNAAICPDVSRAASARAPASSKHTNDA 124
              A+ AA     + A +A   A++  T  A
Sbjct: 540 TTIATTAATTTATTTATTATTTATTTATTTA 570

>gb|AAO50776.1| similar to Dictyostelium discoideum (Slime mold). Spore coat
           protein SP96
          Length = 600

 Score = 39.3 bits (90), Expect = 0.013
 Identities = 27/92 (29%), Positives = 48/92 (51%)
 Frame = -1

Query: 396 SSCAASAAS*LCCSSSAACLSAPPSPSTSFGHTGPSRAKACSAAVCSCVCDTVWPSTLKS 217
           SS A+S+ S    SSS +  +A  SPS+S   + PS + + S++  S    +  PS+  S
Sbjct: 453 SSAASSSPSSSAASSSPSSSAASSSPSSSAASSSPSSSASSSSSPSSSASSSSAPSSSAS 512

Query: 216 EICASNAAICPDVSRAASARAPASSKHTNDAT 121
              A +++     + ++SA + A++  T  AT
Sbjct: 513 SSSAPSSSASSSSASSSSASSAATTAATTIAT 544

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 29/97 (29%), Positives = 50/97 (50%)
 Frame = -1

Query: 396 SSCAASAAS*LCCSSSAACLSAPPSPSTSFGHTGPSRAKACSAAVCSCVCDTVWPSTLKS 217
           S+ ++SA+     SSS +  +A  SPS+S   + PS + A S++  S    +  PS+  S
Sbjct: 444 SAVSSSASGSSAASSSPSSSAASSSPSSSAASSSPS-SSAASSSPSSSASSSSSPSSSAS 502

Query: 216 EICASNAAICPDVSRAASARAPASSKHTNDATIFKAA 106
              A +       S A+S+ AP+SS  ++ A+   A+
Sbjct: 503 SSSAPS-------SSASSSSAPSSSASSSSASSSSAS 532

 Score = 30.0 bits (66), Expect = 8.1
 Identities = 28/91 (30%), Positives = 45/91 (48%)
 Frame = -1

Query: 396 SSCAASAAS*LCCSSSAACLSAPPSPSTSFGHTGPSRAKACSAAVCSCVCDTVWPSTLKS 217
           SS ++SA+S    SSSA+  SAP S ++S   + PS + + S+A  S        +T  +
Sbjct: 485 SSPSSSASSSSSPSSSASSSSAPSSSASS--SSAPSSSASSSSASSSSASSA---ATTAA 539

Query: 216 EICASNAAICPDVSRAASARAPASSKHTNDA 124
              A+ AA     + A +A   A++  T  A
Sbjct: 540 TTIATTAATTTATTTATTATTTATTTATTTA 570

>ref|XP_311331.1| ENSANGP00000001657 [Anopheles gambiae] gi|30177813|gb|EAA06779.2|
           ENSANGP00000001657 [Anopheles gambiae str. PEST]
          Length = 283

 Score = 38.1 bits (87), Expect = 0.030
 Identities = 26/85 (30%), Positives = 38/85 (44%)
 Frame = -1

Query: 396 SSCAASAAS*LCCSSSAACLSAPPSPSTSFGHTGPSRAKACSAAVCSCVCDTVWPSTLKS 217
           SSC++   S   C+SS +  ++  S  TS   +G S   +C+ + CSC        T   
Sbjct: 102 SSCSSGTTSSSSCASSCSSSTSSCSSGTSSCRSGTSSCSSCTTS-CSC-------CTSSC 153

Query: 216 EICASNAAICPDVSRAASARAPASS 142
             CAS+ + C   S   S    ASS
Sbjct: 154 SSCASSCSSCASSSSTTSCSCCASS 178

 Score = 37.7 bits (86), Expect = 0.039
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
 Frame = -1

Query: 396 SSCAASAAS*LCCSSSAACLSAPPSPSTSFGHTGPS---RAKACSAAVCSCVCDTVWPST 226
           SSCA+S +S    SSS A   +  + S+S G T  S    + +C  + CS    +    T
Sbjct: 194 SSCASSCSSGTTSSSSCASSCSSSTSSSSSGTTSCSSGTTSSSCCTSSCSSSTSSSCSGT 253

Query: 225 LKSEICASNAAICPDVSRAASARAPASS 142
             S  CAS+ + C   S  +S+ + +SS
Sbjct: 254 TASSSCASSCSSC--ASSCSSSTSSSSS 279

 Score = 36.6 bits (83), Expect = 0.086
 Identities = 24/92 (26%), Positives = 44/92 (47%)
 Frame = -1

Query: 396 SSCAASAAS*LCCSSSAACLSAPPSPSTSFGHTGPSRAKACSAAVCSCVCDTVWPSTLKS 217
           SSC++   S  CC+SS +  ++  S   S   T      A S++ C+  C +   S    
Sbjct: 137 SSCSSCTTSCSCCTSSCSSCASSCSSCASSSSTTSCSCCASSSSSCASSCSSCASS---- 192

Query: 216 EICASNAAICPDVSRAASARAPASSKHTNDAT 121
             C+S A+ C   + ++S+ A + S  T+ ++
Sbjct: 193 --CSSCASSCSSGTTSSSSCASSCSSSTSSSS 222

 Score = 36.6 bits (83), Expect = 0.086
 Identities = 28/92 (30%), Positives = 46/92 (49%)
 Frame = -1

Query: 396 SSCAASAAS*LCCSSSAACLSAPPSPSTSFGHTGPSRAKACSAAVCSCVCDTVWPSTLKS 217
           SSCA+S +S    SS+ +C S   S S+S   +  S A +CS+   SC   T   S+  S
Sbjct: 154 SSCASSCSSCASSSSTTSC-SCCASSSSSCASSCSSCASSCSSCASSCSSGTTSSSSCAS 212

Query: 216 EICASNAAICPDVSRAASARAPASSKHTNDAT 121
             C+S+ +     + + S+   +SS  T+  +
Sbjct: 213 S-CSSSTSSSSSGTTSCSSGTTSSSCCTSSCS 243

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 24/85 (28%), Positives = 41/85 (48%)
 Frame = -1

Query: 396 SSCAASAAS*LCCSSSAACLSAPPSPSTSFGHTGPSRAKACSAAVCSCVCDTVWPSTLKS 217
           SSC++ A+S   CSS A+  S+  + S+S   +  S   + S+   SC   T   S   S
Sbjct: 184 SSCSSCASS---CSSCASSCSSGTTSSSSCASSCSSSTSSSSSGTTSCSSGTTSSSCCTS 240

Query: 216 EICASNAAICPDVSRAASARAPASS 142
              +S ++ C   + ++S  +  SS
Sbjct: 241 SCSSSTSSSCSGTTASSSCASSCSS 265

 Score = 35.0 bits (79), Expect = 0.25
 Identities = 24/89 (26%), Positives = 45/89 (49%)
 Frame = -1

Query: 396 SSCAASAAS*LCCSSSAACLSAPPSPSTSFGHTGPSRAKACSAAVCSCVCDTVWPSTLKS 217
           SS ++ A +  CC++S +  ++  S STS G +G +   +CS+   SC   T   S+  S
Sbjct: 4   SSSSSGATTSSCCTTSCSSGTSSCSSSTSSGSSGTT---SCSSCTSSCSSGTSSCSSATS 60

Query: 216 EICASNAAICPDVSRAASARAPASSKHTN 130
             C+S    C   + ++++   + S  T+
Sbjct: 61  S-CSSGTTSCTSSTSSSNSCTSSCSSGTS 88

 Score = 34.3 bits (77), Expect = 0.43
 Identities = 25/92 (27%), Positives = 41/92 (44%)
 Frame = -1

Query: 396 SSCAASAAS*LCCSSSAACLSAPPSPSTSFGHTGPSRAKACSAAVCSCVCDTVWPSTLKS 217
           SSC++ A+S   CSS     S+  S  +S   +  S   +CS+   S  C T   S+  S
Sbjct: 191 SSCSSCASS---CSSGTTSSSSCASSCSSSTSSSSSGTTSCSSGTTSSSCCTSSCSSSTS 247

Query: 216 EICASNAAICPDVSRAASARAPASSKHTNDAT 121
             C+   A     S  +S  +  SS  ++ ++
Sbjct: 248 SSCSGTTASSSCASSCSSCASSCSSSTSSSSS 279

 Score = 34.3 bits (77), Expect = 0.43
 Identities = 22/69 (31%), Positives = 39/69 (55%), Gaps = 3/69 (4%)
 Frame = -1

Query: 396 SSCAASAAS*LCCSS---SAACLSAPPSPSTSFGHTGPSRAKACSAAVCSCVCDTVWPST 226
           SS ++S++    CSS   S++C ++  S STS   +G + + +C+++  SC   +   ST
Sbjct: 216 SSTSSSSSGTTSCSSGTTSSSCCTSSCSSSTSSSCSGTTASSSCASSCSSCA-SSCSSST 274

Query: 225 LKSEICASN 199
             S  CAS+
Sbjct: 275 SSSSSCASS 283

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 15/107 (14%)
 Frame = -1

Query: 396 SSCAASAAS*LCCSSSAACLSAPPSPSTSFGHTGPSR-----------AKACSAAVCSCV 250
           +SC +S +S   C+SS +  ++  S ST+   +G S            A +CS++  SC 
Sbjct: 67  TSCTSSTSSSNSCTSSCSSGTSSRSSSTTSSSSGTSSCSSGTTSSSSCASSCSSSTSSCS 126

Query: 249 CDT--VWPSTLKSEICASNAAICPD--VSRAASARAPASSKHTNDAT 121
             T      T     C ++ + C     S A+S  + ASS  T   +
Sbjct: 127 SGTSSCRSGTSSCSSCTTSCSCCTSSCSSCASSCSSCASSSSTTSCS 173

>gb|AAK30600.1|AF350271_1 fibroin 1 [Euagrus chisoseus]
          Length = 734

 Score = 36.6 bits (83), Expect = 0.086
 Identities = 33/99 (33%), Positives = 47/99 (47%)
 Frame = -1

Query: 396 SSCAASAAS*LCCSSSAACLSAPPSPSTSFGHTGPSRAKACSAAVCSCVCDTVWPSTLKS 217
           S  AAS AS +  S+SAA  +A  S + + G +  + A + S+        T   ST  S
Sbjct: 3   SQIAASVASAVASSASAAAAAASSSAAAAAGASSAAGAASSSST-------TTTTSTSSS 55

Query: 216 EICASNAAICPDVSRAASARAPASSKHTNDATIFKAAYI 100
              A+ AA     S A+SA A AS+     A+ F +A I
Sbjct: 56  AAAAAAAAAAASASGASSASAAASASAA--ASAFSSALI 92

 Score = 35.0 bits (79), Expect = 0.25
 Identities = 36/99 (36%), Positives = 45/99 (45%)
 Frame = -1

Query: 396 SSCAASAAS*LCCSSSAACLSAPPSPSTSFGHTGPSRAKACSAAVCSCVCDTVWPSTLKS 217
           S  AAS AS +  S+SAA  +A    S+S    G S A    A   S    T   ST  S
Sbjct: 346 SQIAASVASAVASSASAAAAAA----SSSAAAAGASSA----AGAASSSSTTTTTSTSSS 397

Query: 216 EICASNAAICPDVSRAASARAPASSKHTNDATIFKAAYI 100
              A+ AA     S A+SA A AS+     A+ F +A I
Sbjct: 398 AAAAAAAAAAASASGASSASAAASASAA--ASAFSSALI 434

>ref|NP_785935.1| cell surface protein precursor, GY family [Lactobacillus plantarum
           WCFS1] gi|28271881|emb|CAD64786.1| cell surface protein
           precursor, GY family [Lactobacillus plantarum WCFS1]
          Length = 917

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
 Frame = -1

Query: 396 SSCAASAAS*LCCSSSAAC-LSAPPSPSTSFGHTGPSRAKACSAAVCSCVCDTVWPSTLK 220
           SS A+SAA+    +SSAA   S+  S +TS   T  S A   S+A  S     V  +T  
Sbjct: 55  SSAASSAATSSTATSSAATDASSASSTATSTSSTASSTATTSSSAASSTASSAVTSTT-- 112

Query: 219 SEICASNAAICPDVSRAASARAPASSKHTNDATIFKAAYI 100
               AS++A     +  AS+ A ++S  T  AT  KA+ +
Sbjct: 113 --SAASSSAETVSATTPASSDATSTSTATVAATAAKASVV 150



EST assemble image


clone accession position
1 LCL020f08_r AV627072 1 244
2 MXL098c11_r BP098741 37 399




Chlamydomonas reinhardtii
Kazusa DNA Research Institute