KCC003133A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003133A_C01 KCC003133A_c01
GCATACAACGTCTGTCTGGTCGCAACCCTTGTCGCGTTCTGTCAATTGGATTCGTGCACC
GCTGGCTGAGCACCCGATCACTCTGACTTCGCATTAAACAGGTGTAGTTGCAGCTTCTAC
TCCTGTAGGCGCATTTGCCGGGGCCGCTCGCCTTCAGCAGTCAGAGAAGCGCCAGGAGAA
GCGTTTCACCACTCGCTCAGCCCAAATGGCCGCTGCCGCTACTGAGACGGAGGAACTACC
CGAGATCCAGCAGGAGGAGCATAAGCAGCCGCCGCACCCCTCCACGCCGCAGCAGAAGTT
CCGCAAGGACTACGCACCGCCGCCCTACCTGGTCAGCAATGTGCACCTCAACTTTGACCT
GCGCGAGGATGTCAGCACCGTCACCAGCAGGCTGCACATGCTGCCCAACTACGGACAGCT
GGCGGCGGGCGCGGCGCGGCCCGCTCTGACGCTGGACGGGCGCAAGGACGTGAAGCTGGT
GTCGGTGACGGTAGCTGGCAA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003133A_C01 KCC003133A_c01
         (501 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|ZP_00088906.1| COG0308: Aminopeptidase N [Azotobacter vinela...    53  2e-06
ref|ZP_00086015.1| COG0308: Aminopeptidase N [Pseudomonas fluore...    49  3e-05
ref|NP_176563.2| aminopeptidase -related [Arabidopsis thaliana]        47  1e-04
pir||G96662 probable aminopeptidase F24D7.4 [imported] - Arabido...    47  1e-04
gb|AAG52429.1|AC011622_17 putative aminopeptidase; 4537-10989 [A...    47  1e-04

>ref|ZP_00088906.1| COG0308: Aminopeptidase N [Azotobacter vinelandii]
          Length = 1110

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 30/71 (42%), Positives = 44/71 (61%)
 Frame = +2

Query: 287 PQQKFRKDYAPPPYLVSNVHLNFDLREDVSTVTSRLHMLPNYGQLAAGAARPALTLDGRK 466
           P+  + KDY  P YL+   HL+F+L ED + V +RL M  N    A GA  P L LDG++
Sbjct: 231 PKTVYLKDYQAPDYLIDETHLSFELHEDRTLVQARLAMRRN---PAGGAGLPPLVLDGQQ 287

Query: 467 DVKLVSVTVAG 499
            ++L++VT+ G
Sbjct: 288 -LELLAVTLDG 297

>ref|ZP_00086015.1| COG0308: Aminopeptidase N [Pseudomonas fluorescens PfO-1]
          Length = 885

 Score = 49.3 bits (116), Expect = 3e-05
 Identities = 30/70 (42%), Positives = 42/70 (59%)
 Frame = +2

Query: 287 PQQKFRKDYAPPPYLVSNVHLNFDLREDVSTVTSRLHMLPNYGQLAAGAARPALTLDGRK 466
           P+  + KDY  P YL+   HL F+L ED S V ++L M  N    A G   P L LDG++
Sbjct: 6   PKMIYLKDYQAPEYLIDETHLTFELFEDHSLVHAQLVMRRN---PARGPGLPPLVLDGQQ 62

Query: 467 DVKLVSVTVA 496
            ++L+SVT+A
Sbjct: 63  -LELLSVTLA 71

>ref|NP_176563.2| aminopeptidase -related [Arabidopsis thaliana]
          Length = 903

 Score = 47.0 bits (110), Expect = 1e-04
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
 Frame = +2

Query: 122 PVGAFAGAARLQQSEKRQEKRFTT-----RSAQMAAAATETEELPEIQQEEHKQPPHPST 286
           PV   +   R   +   Q + F T     ++++    +  TE +P+ + E+ K       
Sbjct: 26  PVPVRSSCLRSSANRLTQHRPFLTSETHKQNSRRLICSVATESVPD-KAEDSKM----DA 80

Query: 287 PQQKFRKDYAPPPYLVSNVHLNFDLREDVSTVTSRLHMLPNYGQLAAGAARPALTLDGRK 466
           P++ F K+Y  P Y    V L+F L E+ + V+S++ + P     +A     AL LDG  
Sbjct: 81  PKEIFLKNYTKPDYYFETVDLSFSLGEEKTIVSSKIKVSPRVKGSSA-----ALVLDGH- 134

Query: 467 DVKLVSVTVAG 499
           D+KL+SV V G
Sbjct: 135 DLKLLSVKVEG 145

>pir||G96662 probable aminopeptidase F24D7.4 [imported] - Arabidopsis thaliana
          Length = 964

 Score = 47.0 bits (110), Expect = 1e-04
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
 Frame = +2

Query: 122 PVGAFAGAARLQQSEKRQEKRFTT-----RSAQMAAAATETEELPEIQQEEHKQPPHPST 286
           PV   +   R   +   Q + F T     ++++    +  TE +P+ + E+ K       
Sbjct: 26  PVPVRSSCLRSSANRLTQHRPFLTSETHKQNSRRLICSVATESVPD-KAEDSKM----DA 80

Query: 287 PQQKFRKDYAPPPYLVSNVHLNFDLREDVSTVTSRLHMLPNYGQLAAGAARPALTLDGRK 466
           P++ F K+Y  P Y    V L+F L E+ + V+S++ + P     +A     AL LDG  
Sbjct: 81  PKEIFLKNYTKPDYYFETVDLSFSLGEEKTIVSSKIKVSPRVKGSSA-----ALVLDGH- 134

Query: 467 DVKLVSVTVAG 499
           D+KL+SV V G
Sbjct: 135 DLKLLSVKVEG 145

>gb|AAG52429.1|AC011622_17 putative aminopeptidase; 4537-10989 [Arabidopsis thaliana]
          Length = 964

 Score = 47.0 bits (110), Expect = 1e-04
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
 Frame = +2

Query: 122 PVGAFAGAARLQQSEKRQEKRFTT-----RSAQMAAAATETEELPEIQQEEHKQPPHPST 286
           PV   +   R   +   Q + F T     ++++    +  TE +P+ + E+ K       
Sbjct: 26  PVPVRSSCLRSSANRLTQHRPFLTSETHKQNSRRLICSVATESVPD-KAEDSKM----DA 80

Query: 287 PQQKFRKDYAPPPYLVSNVHLNFDLREDVSTVTSRLHMLPNYGQLAAGAARPALTLDGRK 466
           P++ F K+Y  P Y    V L+F L E+ + V+S++ + P     +A     AL LDG  
Sbjct: 81  PKEIFLKNYTKPDYYFETVDLSFSLGEEKTIVSSKIKVSPRVKGSSA-----ALVLDGH- 134

Query: 467 DVKLVSVTVAG 499
           D+KL+SV V G
Sbjct: 135 DLKLLSVKVEG 145



EST assemble image


clone accession position
1 LCL020e02_r AV627060 1 411
2 MXL099d07_r BP098806 1 501




Chlamydomonas reinhardtii
Kazusa DNA Research Institute