Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003129A_C01 KCC003129A_c01
(201 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC32898.1| unnamed protein product [Mus musculus] 41 0.005
ref|XP_125863.1| RIKEN cDNA 4733401N12 [Mus musculus] 41 0.006
dbj|BAC33392.1| unnamed protein product [Mus musculus] 41 0.006
ref|NP_008938.1| cleavage and polyadenylation specific factor 6,... 41 0.006
sp|Q98937|FXGA_CHICK Forkhead box protein G1A (Forkhead-related ... 38 0.051
>dbj|BAC32898.1| unnamed protein product [Mus musculus]
Length = 551
Score = 41.2 bits (95), Expect = 0.005
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = -2
Query: 182 GGKPPPIPRGGSAPRPPFGRSGSDGPDPDPEVDGLLLSSSMSSV 51
GG PPP P G + PRPP G G GP P P G +L ++ +
Sbjct: 224 GGPPPPFPAGQTPPRPPLGPPGPPGP-PGPPPPGQVLPPPLAGL 266
>ref|XP_125863.1| RIKEN cDNA 4733401N12 [Mus musculus]
Length = 316
Score = 40.8 bits (94), Expect = 0.006
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = -2
Query: 182 GGKPPPIPRGGSAPRPPFGRSGSDGPDPDPEVDGLLL 72
GG PPP P G + PRPP G G GP P P G +L
Sbjct: 172 GGPPPPFPAGQTPPRPPLGPPGPPGP-PGPPPPGQVL 207
>dbj|BAC33392.1| unnamed protein product [Mus musculus]
Length = 551
Score = 40.8 bits (94), Expect = 0.006
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = -2
Query: 182 GGKPPPIPRGGSAPRPPFGRSGSDGPDPDPEVDGLLL 72
GG PPP P G + PRPP G G GP P P G +L
Sbjct: 224 GGPPPPFPAGQTPPRPPLGPPGPPGP-PGPPPPGQVL 259
>ref|NP_008938.1| cleavage and polyadenylation specific factor 6, 68 kD subunit;
pre-mRNA cleavage factor Im (68kD); cleavage and
polyadenylation specific factor 6, 68kD subunit;
pre-mRNA cleavage factor I, 68kD subunit [Homo sapiens]
gi|1362819|pir||S57447 HPBRII-7 protein - human
gi|871299|emb|CAA47752.1| Human pre-mRNA cleavage factor
I 68 kDa subunit [Homo sapiens]
gi|871301|emb|CAA47751.1| HPBRII-7 [Homo sapiens]
Length = 551
Score = 40.8 bits (94), Expect = 0.006
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = -2
Query: 182 GGKPPPIPRGGSAPRPPFGRSGSDGPDPDPEVDGLLL 72
GG PPP P G + PRPP G G GP P P G +L
Sbjct: 224 GGPPPPFPAGQTPPRPPLGPPGPPGP-PGPPPPGQVL 259
>sp|Q98937|FXGA_CHICK Forkhead box protein G1A (Forkhead-related protein FKHL2)
(Transcription factor BF-2) (Brain factor 2) (BF2)
(CBF-2) (T-14-6) gi|7446203|pir||S71795 transcription
factor CBF-2 - chicken gi|1546784|gb|AAB08467.1| chicken
brain factor-2 [Gallus gallus]
Length = 440
Score = 37.7 bits (86), Expect = 0.051
Identities = 24/61 (39%), Positives = 26/61 (42%)
Frame = -3
Query: 196 PRSALGANHHPSPEVGAPRDRPLAVQAATVPTPIPK*TACCSRPPCPPSAVTVLLAVWRV 17
P SAL A HHPSP P P AA +P P P PP PP LL +
Sbjct: 291 PHSALFAFHHPSPPPRQPPAAPAGAPAAALPPPPP--------PPPPPRRRAPLLPAAEL 342
Query: 16 A 14
A
Sbjct: 343 A 343
