Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003128A_C01 KCC003128A_c01
(433 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG24816.1| putative colanic acid fucosyl transferase [Salmon... 33 0.69
ref|NP_461051.1| putative glycosyl transferase in colanic acid b... 33 0.69
ref|NP_456654.1| putative glycosyltransferase [Salmonella enteri... 33 0.69
ref|NP_536245.1| conjugal transfer protein, Dtr system [Agrobact... 33 0.91
ref|NP_396650.1| AGR_pTi_237p [Agrobacterium tumefaciens] gi|151... 33 0.91
>gb|AAG24816.1| putative colanic acid fucosyl transferase [Salmonella typhimurium]
Length = 400
Score = 33.5 bits (75), Expect = 0.69
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = -3
Query: 320 YNSWRFRRSRSESCTGRCRAGWLGVVEAGKR*TRLIHTHAHVTRSAWPQMAGYKVGPE-- 147
Y++WR+RR E+ RC L V + RL+H + S +P MA + P+
Sbjct: 53 YSAWRYRREEGEATVWRCP---LYVPKQPSTLKRLLHLGSFALSSFFPLMAQRRWKPDRI 109
Query: 146 -GLVPS--CTRNLFKASQLS 96
G+VP+ CT + + LS
Sbjct: 110 IGVVPTLFCTPGMRLLATLS 129
>ref|NP_461051.1| putative glycosyl transferase in colanic acid biosynthesis
[Salmonella typhimurium LT2] gi|16420639|gb|AAL21010.1|
putative glycosyl transferase [Salmonella typhimurium
LT2]
Length = 407
Score = 33.5 bits (75), Expect = 0.69
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = -3
Query: 320 YNSWRFRRSRSESCTGRCRAGWLGVVEAGKR*TRLIHTHAHVTRSAWPQMAGYKVGPE-- 147
Y++WR+RR E+ RC L V + RL+H + S +P MA + P+
Sbjct: 53 YSAWRYRREEGEATVWRCP---LYVPKQPSTLKRLLHLGSFALSSFFPLMAQRRWKPDRI 109
Query: 146 -GLVPS--CTRNLFKASQLS 96
G+VP+ CT + + LS
Sbjct: 110 IGVVPTLFCTPGMRLLATLS 129
>ref|NP_456654.1| putative glycosyltransferase [Salmonella enterica subsp. enterica
serovar Typhi] gi|29141267|ref|NP_804609.1| putative
glycosyl transferase [Salmonella enterica subsp.
enterica serovar Typhi Ty2] gi|25512977|pir||AG0768
probable glycosyltransferase STY2318 [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18) gi|16503335|emb|CAD02469.1| putative
glycosyltransferase [Salmonella enterica subsp. enterica
serovar Typhi] gi|29136893|gb|AAO68458.1| putative
glycosyl transferase [Salmonella enterica subsp.
enterica serovar Typhi Ty2]
Length = 407
Score = 33.5 bits (75), Expect = 0.69
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = -3
Query: 320 YNSWRFRRSRSESCTGRCRAGWLGVVEAGKR*TRLIHTHAHVTRSAWPQMAGYKVGPE-- 147
Y++WR+RR E+ RC L V + RL+H + S +P MA + P+
Sbjct: 53 YSAWRYRREEGEATVWRCP---LYVPKQPSTLKRLLHLGSFALSSFFPLMAQRRWKPDRI 109
Query: 146 -GLVPS--CTRNLFKASQLS 96
G+VP+ CT + + LS
Sbjct: 110 IGVVPTLFCTPGMRLLATLS 129
>ref|NP_536245.1| conjugal transfer protein, Dtr system [Agrobacterium tumefaciens
str. C58 (U. Washington)]
gi|20141965|sp|Q44349|TRAA_AGRT5 Conjugal transfer
protein traA gi|25525006|pir||AE3243 conjugal transfer
protein, Dtr system traA [imported] - Agrobacterium
tumefaciens (strain C58, Dupont) plasmid Ti
gi|17744153|gb|AAL46363.1| conjugal transfer protein,
Dtr system [Agrobacterium tumefaciens str. C58 (U.
Washington)]
Length = 1100
Score = 33.1 bits (74), Expect = 0.91
Identities = 26/67 (38%), Positives = 32/67 (46%), Gaps = 1/67 (1%)
Frame = -1
Query: 421 AGALKMAGAQLTTGCSQKPTRYYLTMGEAESVGGIIAG-ASEGLDQRAALDVAGLDGWAL 245
A + AGA TT K R + VGG +AG ASEGLD+ A ++ L W L
Sbjct: 400 AAVVGRAGAGKTT--MMKAAREAWELAGYRVVGGALAGKASEGLDKEAGIESRTLSSWEL 457
Query: 244 SRQGNGR 224
R GR
Sbjct: 458 -RWNRGR 463
>ref|NP_396650.1| AGR_pTi_237p [Agrobacterium tumefaciens] gi|15163619|gb|AAK91091.1|
AGR_pTi_237p [Agrobacterium tumefaciens str. C58
(Cereon)]
Length = 1117
Score = 33.1 bits (74), Expect = 0.91
Identities = 26/67 (38%), Positives = 32/67 (46%), Gaps = 1/67 (1%)
Frame = -1
Query: 421 AGALKMAGAQLTTGCSQKPTRYYLTMGEAESVGGIIAG-ASEGLDQRAALDVAGLDGWAL 245
A + AGA TT K R + VGG +AG ASEGLD+ A ++ L W L
Sbjct: 417 AAVVGRAGAGKTT--MMKAAREAWELAGYRVVGGALAGKASEGLDKEAGIESRTLSSWEL 474
Query: 244 SRQGNGR 224
R GR
Sbjct: 475 -RWNRGR 480
