KCC003127A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003127A_C01 KCC003127A_c01
cctggaCGTCAGCATAGTCAATAAGAGCTTCGTGCTTAAACACATACAGTCACAGCCTTG
CCCGCGTTCTTTGCTTGTTCGGACCGTCGAGTGAAGTTTAAGATGCTCTCGGGCCACGGC
CCGCAGACCCAATGGGTGCCTGTGGGAGTTCCCTACGTGCCAAATGGCATGATTGCGCCT
GGGATGATGGCTCCGGGTATGGTGTTTGGTCCTGCCTATGGCTACGCATCGCCAGGCCCC
ATCTCAACTATGACAACAGCAGATGGGCTTCGGGGTGCATATGCTTTCGGAGGAATGCCG
ACGGCTGTGCAGGGAGCGGATGAGGCGGCTGCGCTGGCGGAGAGGCTTAATGAGCTGCAG
CTTGGGGCTCGGGGCCGGGGCCCCGTCCACGGGCCGGGCGGCTTTACGCGCGGCGGATTG
GCGGGTCCCTCTGGCATGCCCGGCCCCGGCCTGCAAAGTCAGTTCTACTACACGCCGGGG
CCGCCGATGCAGATGCAGCCGCAGCAGCAGCAACAGCCGCAGCAGCAGCCGCAGCAGTTA
CAACAACAACAACAGCATATGGGGCGAGGGCGCCAGGGCCGGGGCGGCCGTGGCGGCATG
CCGCAGCAGCACAGCGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003127A_C01 KCC003127A_c01
         (617 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAB05810.1| super cysteine rich protein; SCRP [Homo sapiens]        65  6e-10
ref|NP_525115.1| mastermind CG8118-PA [Drosophila melanogaster] ...    57  2e-07
pir||T13998 gene mastermind protein - fruit fly (Drosophila viri...    57  3e-07
sp|P21519|MAM_DROME NEUROGENIC PROTEIN MASTERMIND gi|103241|pir|...    56  4e-07
ref|NP_496274.1| putative protein (15.6 kD) (2K854) [Caenorhabdi...    55  8e-07

>gb|AAB05810.1| super cysteine rich protein; SCRP [Homo sapiens]
          Length = 46

 Score = 65.5 bits (158), Expect = 6e-10
 Identities = 21/30 (70%), Positives = 21/30 (70%)
 Frame = -1

Query: 578 PWRPRPICCCCCCNCCGCCCGCCCCCGCIC 489
           P R R  CCCCCC CC CCC CCCCC C C
Sbjct: 6   PDRSRCCCCCCCCCCCCCCCCCCCCCCCFC 35

 Score = 63.2 bits (152), Expect = 3e-09
 Identities = 21/42 (50%), Positives = 22/42 (52%)
 Frame = -1

Query: 611 CCCGMPPRPPRPWRPRPICCCCCCNCCGCCCGCCCCCGCICI 486
           CCC               CCCCCC CC CCC CCCCC C C+
Sbjct: 12  CCC---------------CCCCCCCCCCCCCCCCCCCFCCCL 38

 Score = 38.5 bits (88), Expect = 0.079
 Identities = 12/22 (54%), Positives = 13/22 (58%)
 Frame = -1

Query: 554 CCCCCNCCGCCCGCCCCCGCIC 489
           C  C +   CCC CCCCC C C
Sbjct: 2   CELCPDRSRCCCCCCCCCCCCC 23

>ref|NP_525115.1| mastermind CG8118-PA [Drosophila melanogaster]
            gi|24653534|ref|NP_725354.1| mastermind CG8118-PB
            [Drosophila melanogaster] gi|7303237|gb|AAF58299.1|
            CG8118-PA [Drosophila melanogaster]
            gi|21627214|gb|AAF58300.2| CG8118-PB [Drosophila
            melanogaster]
          Length = 1594

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 61/186 (32%), Positives = 76/186 (40%), Gaps = 22/186 (11%)
 Frame = +1

Query: 109  SGHGPQTQWVPVGVPYVPNGMIAPGMMAPGMVFGPAYGYASPGPISTMTTADGLRGAYAF 288
            +G GP+T    +GVPY        G  A G + GP      P   +   T DG       
Sbjct: 1298 AGGGPRTG---MGVPY--------GGGAGGPMGGPQQQQRPP---NVQVTPDG------- 1336

Query: 289  GGMPTAVQGADEAAALAERLNELQLGARGRG-PVH-GPGGFTRGGLAGPSGMP------G 444
              MP   Q       + ++  ++  G  G G P+  GPGGF  GG   P+G P      G
Sbjct: 1337 --MPMGSQQEWRHMMMTQQQTQMGFGGPGPGGPMRQGPGGFN-GGNFMPNGAPNGAAGSG 1393

Query: 445  PGLQSQFYYTPGPPMQMQPQQQQQP--QQQPQQLQQQQQHMGRG------------RQGR 582
            P           P MQ+ P Q QQ   +QQ QQ QQQQQHMG G            +Q  
Sbjct: 1394 PNAGGMMSGPNVPQMQLTPAQMQQQLMRQQQQQQQQQQQHMGPGAANNMQMQQLLQQQQS 1453

Query: 583  GGRGGM 600
            GG G M
Sbjct: 1454 GGGGNM 1459

 Score = 49.3 bits (116), Expect = 4e-05
 Identities = 28/48 (58%), Positives = 30/48 (62%), Gaps = 5/48 (10%)
 Frame = +1

Query: 475 PGPPMQMQPQQQQQPQQQPQQLQQQQQH---MGRGRQGRGG--RGGMP 603
           P PP  M PQQQQQ QQQ QQ Q QQQH   MG+G+ GR     GG P
Sbjct: 638 PRPPHGMNPQQQQQQQQQQQQQQAQQQHGQMMGQGQPGRYNDYGGGFP 685

 Score = 40.8 bits (94), Expect = 0.016
 Identities = 46/167 (27%), Positives = 59/167 (34%), Gaps = 9/167 (5%)
 Frame = +1

Query: 121  PQTQWVPVGVPYVPNGMIAPGMMAPGMVFGPAYGYASPGPISTMTTADGLRGAYAFGGMP 300
            P  Q   VGV       +  G+   G+V GP  G  + G ++ M    G       GG  
Sbjct: 1084 PLMQQPQVGVGVGVGVGVGVGVGNGGVVGGPGSGGPNNGAMNQMGGPMGGMPGMQMGGPM 1143

Query: 301  TAVQGADEAAALAERLNELQLGARGRGPVHGPGGFTRGGLAGPSGMPGPGLQSQFYYTPG 480
              +Q    AA    +   +  GA G G V GPG        GP+      LQ Q      
Sbjct: 1144 NPMQMNPNAAGPTAQQMMMGSGAGGPGQVPGPG-------QGPNPNQAKFLQQQQMMRAQ 1196

Query: 481  PPMQMQ---------PQQQQQPQQQPQQLQQQQQHMGRGRQGRGGRG 594
               Q Q         P +    + Q  Q Q  QQ +G G  G GG G
Sbjct: 1197 AMQQQQQHMSGARPPPPEYNATKAQLMQAQMMQQTVGGGGVGVGGVG 1243

 Score = 37.0 bits (84), Expect = 0.23
 Identities = 42/157 (26%), Positives = 58/157 (36%), Gaps = 9/157 (5%)
 Frame = +1

Query: 151  PYVPNGMIAPGMMAPGMVFGPAYGYASPGPISTMTTADGLRGA-------YAFGGMPTAV 309
            P     M+  G   PG V GP  G  +P     +     +R         +  G  P   
Sbjct: 1155 PTAQQMMMGSGAGGPGQVPGPGQG-PNPNQAKFLQQQQMMRAQAMQQQQQHMSGARPPPP 1213

Query: 310  Q-GADEAAALAERLNELQLGARGRGPVHGPG-GFTRGGLAGPSGMPGPGLQSQFYYTPGP 483
            +  A +A  +  ++ +  +G  G G V G G G   GG+ G +G   P   +Q       
Sbjct: 1214 EYNATKAQLMQAQMMQQTVGGGGVG-VGGVGVGVGVGGVGGANGGRFPNSAAQA--AAMR 1270

Query: 484  PMQMQPQQQQQPQQQPQQLQQQQQHMGRGRQGRGGRG 594
             M  QP     P  +PQ     QQH G G   R G G
Sbjct: 1271 RMTQQPIPPSGPMMRPQHAMYMQQHGGAGGGPRTGMG 1307

 Score = 35.8 bits (81), Expect = 0.51
 Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +1

Query: 442 GPGLQSQFYYTPGPPMQMQPQQQQQPQQQ--PQQLQQQQ 552
           G G  + F   P  P Q Q  QQQQPQQQ  P Q  QQ+
Sbjct: 681 GGGFPNDFGLGPNGPQQQQQAQQQQPQQQHLPPQFHQQK 719

 Score = 35.8 bits (81), Expect = 0.51
 Identities = 18/32 (56%), Positives = 20/32 (62%)
 Frame = +1

Query: 481 PPMQMQPQQQQQPQQQPQQLQQQQQHMGRGRQ 576
           P    Q QQQQ PQQQ QQ QQQQQ   + +Q
Sbjct: 783 PNFNKQQQQQQVPQQQLQQQQQQQQQQQQQQQ 814

 Score = 34.7 bits (78), Expect = 1.1
 Identities = 21/40 (52%), Positives = 22/40 (54%)
 Frame = +1

Query: 433 GMPGPGLQSQFYYTPGPPMQMQPQQQQQPQQQPQQLQQQQ 552
           G+P    Q Q    P    Q Q QQQQQ QQQ QQ QQQQ
Sbjct: 781 GVPNFNKQQQQQQVP----QQQLQQQQQQQQQQQQQQQQQ 816

 Score = 33.9 bits (76), Expect = 1.9
 Identities = 19/40 (47%), Positives = 22/40 (54%)
 Frame = +1

Query: 496 QPQQQQQPQQQPQQLQQQQQHMGRGRQGRGGRGGMPQQHS 615
           Q QQQQQ QQQ   LQ  QQH+G   Q +       QQH+
Sbjct: 21  QQQQQQQQQQQHLNLQLHQQHLGLHLQQQQQLQLQQQQHN 60

 Score = 33.9 bits (76), Expect = 1.9
 Identities = 31/107 (28%), Positives = 40/107 (36%), Gaps = 25/107 (23%)
 Frame = +1

Query: 370 RGRGPVHGPGGFTRGGLAGPSGMPGPG--------LQSQFYYTPGPPMQMQPQQQQQ--- 516
           RG  P +  GGF  G   G  G P  G        L S+         QM  Q Q +   
Sbjct: 573 RGGNPGN-QGGFPNGPNGGTGGAPNAGGNGGNSGNLMSEHPLAAQTLKQMAEQHQHKNAM 631

Query: 517 --------------PQQQPQQLQQQQQHMGRGRQGRGGRGGMPQQHS 615
                         PQQQ QQ QQQQQ   + + G+    G P +++
Sbjct: 632 GGMGGFPRPPHGMNPQQQQQQQQQQQQQQAQQQHGQMMGQGQPGRYN 678

 Score = 33.5 bits (75), Expect = 2.5
 Identities = 21/53 (39%), Positives = 24/53 (44%), Gaps = 5/53 (9%)
 Frame = +1

Query: 451 LQSQFYYTPGPPMQMQPQQQQQPQQQPQQLQQQQQHMGRGRQG-----RGGRG 594
           LQ Q +       Q+Q QQQQQ QQQ QQ Q    +   G  G      GG G
Sbjct: 54  LQQQQHNAQAQQQQIQVQQQQQQQQQQQQQQHSPYNANLGATGGIAGITGGNG 106

 Score = 32.3 bits (72), Expect = 5.6
 Identities = 18/37 (48%), Positives = 19/37 (50%)
 Frame = +1

Query: 490 QMQPQQQQQPQQQPQQLQQQQQHMGRGRQGRGGRGGM 600
           Q Q QQ Q  QQQ QQ QQQQQ         G  GG+
Sbjct: 62  QAQQQQIQVQQQQQQQQQQQQQQHSPYNANLGATGGI 98

 Score = 32.0 bits (71), Expect = 7.4
 Identities = 16/27 (59%), Positives = 16/27 (59%)
 Frame = +1

Query: 523 QQPQQLQQQQQHMGRGRQGRGGRGGMP 603
           QQ  Q QQQQQ  G G  G  GRGG P
Sbjct: 392 QQQHQQQQQQQGGGLGGLGNNGRGGGP 418

 Score = 32.0 bits (71), Expect = 7.4
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 11/66 (16%)
 Frame = +1

Query: 439 PGPG-----------LQSQFYYTPGPPMQMQPQQQQQPQQQPQQLQQQQQHMGRGRQGRG 585
           PGPG           ++ + +Y+      ++  QQQQ  QQ    QQQQ H  + +Q + 
Sbjct: 721 PGPGAGMNVQQNFLDIKQELFYSSQNDFDLKRLQQQQAMQQ---QQQQQHHQQQQQQQQP 777

Query: 586 GRGGMP 603
             GG+P
Sbjct: 778 KMGGVP 783

>pir||T13998 gene mastermind protein - fruit fly (Drosophila virilis)
            gi|157834|gb|AAC37201.1| mastermind
          Length = 1655

 Score = 56.6 bits (135), Expect = 3e-07
 Identities = 46/123 (37%), Positives = 53/123 (42%), Gaps = 17/123 (13%)
 Frame = +1

Query: 292  GMPTAVQGADEAAALAERLNELQLGARGRGPVH-GPGGFTRGGLA----------GPSG- 435
            GMP   Q   E   +     + Q+G    GP+  GPGGF  G             GP+G 
Sbjct: 1385 GMPMGSQ--QEWRHMMMTQQQQQMGFGPGGPMRQGPGGFNGGNFMPNGAPNAPGNGPNGG 1442

Query: 436  -----MPGPGLQSQFYYTPGPPMQMQPQQQQQPQQQPQQLQQQQQHMGRGRQGRGGRGGM 600
                 MPGP          GP MQ+ P Q QQ   Q  + QQQQQHMG G  G GG G M
Sbjct: 1443 GGGGMMPGPN---------GPQMQLTPAQMQQ---QHMRQQQQQQHMGPGGGGGGGGGNM 1490

Query: 601  PQQ 609
              Q
Sbjct: 1491 QMQ 1493

 Score = 40.4 bits (93), Expect = 0.021
 Identities = 20/37 (54%), Positives = 23/37 (62%)
 Frame = +1

Query: 490 QMQPQQQQQPQQQPQQLQQQQQHMGRGRQGRGGRGGM 600
           Q Q  QQQQ QQQ  Q QQQQ H  + +Q  GG GG+
Sbjct: 391 QQQQHQQQQHQQQQHQQQQQQHHHQQQQQQGGGLGGL 427

 Score = 40.0 bits (92), Expect = 0.027
 Identities = 44/130 (33%), Positives = 51/130 (38%), Gaps = 20/130 (15%)
 Frame = +1

Query: 280 YAFGGMPTAVQGADEAAALAERLNELQLGARGRGPVHGPGGFTRGGLAGPSGMPGPGLQS 459
           + FGG    + G D  +         Q G  G     G GG T GG  G +G PG GL S
Sbjct: 573 HGFGGFGVGL-GLDPQSMKMRPGVGFQNGPNGNANA-GNGGPTAGGGGGGNG-PG-GLMS 628

Query: 460 QFYYTPGPPMQMQPQ--------------------QQQQPQQQPQQLQQQQQHMGRGRQG 579
           +         QM  Q                    QQQQPQQQ Q  QQQQQ  G+   G
Sbjct: 629 EHSLAAQTLKQMAEQHQHKSAMGGMGGFHVPPHGMQQQQPQQQQQAPQQQQQQHGQ-MMG 687

Query: 580 RGGRGGMPQQ 609
             G+G   QQ
Sbjct: 688 GPGQGQQQQQ 697

 Score = 40.0 bits (92), Expect = 0.027
 Identities = 21/36 (58%), Positives = 21/36 (58%)
 Frame = +1

Query: 490 QMQPQQQQQPQQQPQQLQQQQQHMGRGRQGRGGRGG 597
           Q Q QQ QQ QQQ    QQQQQ  G G  G  GRGG
Sbjct: 399 QHQQQQHQQQQQQHHHQQQQQQGGGLGGLGNNGRGG 434

 Score = 38.9 bits (89), Expect = 0.060
 Identities = 29/82 (35%), Positives = 32/82 (38%), Gaps = 21/82 (25%)
 Frame = +1

Query: 427 PSGMPGPGLQSQF--------YYTPGP-----------PMQMQPQQQQQPQQQPQQLQQQ 549
           P G PG  +Q  F        Y +P               Q Q QQQQQ QQQ    QQQ
Sbjct: 737 PGGGPGMNVQQNFLDIKQELFYSSPNDFDLKHLQQQQAMQQQQQQQQQQQQQQQHHAQQQ 796

Query: 550 QQHMGRGRQG--RGGRGGMPQQ 609
           QQH      G   GG G   +Q
Sbjct: 797 QQHPNGPNMGVPMGGAGNFAKQ 818

 Score = 38.1 bits (87), Expect = 0.10
 Identities = 22/49 (44%), Positives = 26/49 (52%)
 Frame = +1

Query: 409  RGGLAGPSGMPGPGLQSQFYYTPGPPMQMQPQQQQQPQQQPQQLQQQQQ 555
            RG  + P+ +PG    +          Q Q QQQQQ QQQ QQ QQQQQ
Sbjct: 887  RGPQSNPNAVPGGNAANA-------TQQQQQQQQQQQQQQQQQQQQQQQ 928

 Score = 38.1 bits (87), Expect = 0.10
 Identities = 22/45 (48%), Positives = 22/45 (48%), Gaps = 10/45 (22%)
 Frame = +1

Query: 490 QMQPQQQQQPQQQPQQLQQQQQHM----------GRGRQGRGGRG 594
           Q Q QQQQ  QQQ QQ QQQ  H           G G  GRGG G
Sbjct: 392 QQQHQQQQHQQQQHQQQQQQHHHQQQQQQGGGLGGLGNNGRGGGG 436

 Score = 37.4 bits (85), Expect = 0.17
 Identities = 32/87 (36%), Positives = 36/87 (40%), Gaps = 18/87 (20%)
 Frame = +1

Query: 391  GPGGFTRGGLAGPSG----------MPGPGLQSQFYYTPGPPMQMQPQQQQQPQQQP--- 531
            G GG  RGG+ GP G          M G G   Q    P P +Q+ P       QQ    
Sbjct: 1338 GAGGGPRGGMGGPYGGGGVGGAGGPMGGGGGGQQQQQRP-PNVQVTPDGMPMGSQQEWRH 1396

Query: 532  QQLQQQQQHMGRG-----RQGRGGRGG 597
              + QQQQ MG G     RQG GG  G
Sbjct: 1397 MMMTQQQQQMGFGPGGPMRQGPGGFNG 1423

 Score = 36.6 bits (83), Expect = 0.30
 Identities = 31/88 (35%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
 Frame = +1

Query: 367 ARGRGPVHGPGGFTRGGLAGPSGMPGPGLQSQFYYTPG-------PPMQMQPQQQQQPQQ 525
           A G G  +GPGG           +     Q Q     G       PP  MQ QQ QQ QQ
Sbjct: 614 AGGGGGGNGPGGLMSEHSLAAQTLKQMAEQHQHKSAMGGMGGFHVPPHGMQQQQPQQQQQ 673

Query: 526 QPQQLQQQQQHMGRGRQGRGGRGGMPQQ 609
            PQ  QQQQ     G  G+G +    QQ
Sbjct: 674 APQ-QQQQQHGQMMGGPGQGQQQQQQQQ 700

 Score = 36.2 bits (82), Expect = 0.39
 Identities = 19/36 (52%), Positives = 21/36 (57%)
 Frame = +1

Query: 451 LQSQFYYTPGPPMQMQPQQQQQPQQQPQQLQQQQQH 558
           LQ Q  +      Q Q Q QQQ QQ+ QQ QQQQQH
Sbjct: 69  LQQQQQHNAQAQQQQQLQVQQQQQQRQQQQQQQQQH 104

 Score = 35.8 bits (81), Expect = 0.51
 Identities = 23/55 (41%), Positives = 26/55 (46%), Gaps = 3/55 (5%)
 Frame = +1

Query: 454  QSQFYYTPGPPMQMQPQQQQQPQQ---QPQQLQQQQQHMGRGRQGRGGRGGMPQQ 609
            Q   +++     Q Q QQQQQP      PQQ QQQQ H G      GG  G  QQ
Sbjct: 977  QQGVFFSQQQAAQQQQQQQQQPGNAGPNPQQ-QQQQPHGGNAGANGGGPNGPQQQ 1030

 Score = 35.8 bits (81), Expect = 0.51
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = +1

Query: 502 QQQQQPQQQPQQLQQQQQHM 561
           QQQQQ QQQ QQ QQQQQH+
Sbjct: 23  QQQQQQQQQQQQQQQQQQHL 42

 Score = 35.8 bits (81), Expect = 0.51
 Identities = 21/39 (53%), Positives = 21/39 (53%)
 Frame = +1

Query: 439  PGPGLQSQFYYTPGPPMQMQPQQQQQPQQQPQQLQQQQQ 555
            P  G QS     PG       QQQQQ QQQ QQ QQQQQ
Sbjct: 885  PPRGPQSNPNAVPGGNAANATQQQQQQQQQQQQQQQQQQ 923

 Score = 34.3 bits (77), Expect = 1.5
 Identities = 18/39 (46%), Positives = 21/39 (53%)
 Frame = +1

Query: 496 QPQQQQQPQQQPQQLQQQQQHMGRGRQGRGGRGGMPQQH 612
           Q Q QQQ  QQ QQ QQQQQH  +  Q +  +    Q H
Sbjct: 375 QQQHQQQQHQQHQQHQQQQQHQQQQHQQQQHQQQQQQHH 413

 Score = 33.9 bits (76), Expect = 1.9
 Identities = 31/101 (30%), Positives = 39/101 (37%), Gaps = 1/101 (0%)
 Frame = +1

Query: 298  PTAVQGADEAAALAERLNELQLGARGRGPVHGPGGFTRGGLAGPSGMPGPGLQSQFYYTP 477
            P     A +A  +  ++ +  +G  G G V G G    GG+ G  G  G    S      
Sbjct: 1251 PPPEYNATKAQLMQAQMMQQTVGGGGGGGV-GVGVGVGGGVGGGGGA-GRFPNSAAQAAA 1308

Query: 478  GPPMQMQPQQQQQPQQQPQQ-LQQQQQHMGRGRQGRGGRGG 597
               M  QP     P  +PQ      QQH G G   RGG GG
Sbjct: 1309 MRRMTQQPIPPSGPMMRPQHAAMYMQQHGGAGGGPRGGMGG 1349

 Score = 33.5 bits (75), Expect = 2.5
 Identities = 26/75 (34%), Positives = 28/75 (36%), Gaps = 24/75 (32%)
 Frame = +1

Query: 424  GPSGMPGPGLQSQFYYTPGPPMQMQPQQQQQP------------------------QQQP 531
            GP G   PG   Q         Q QPQQQQQP                        QQQ 
Sbjct: 861  GPQGNQAPGNMPQ-------QQQQQPQQQQQPPRGPQSNPNAVPGGNAANATQQQQQQQQ 913

Query: 532  QQLQQQQQHMGRGRQ 576
            QQ QQQQQ   + +Q
Sbjct: 914  QQQQQQQQQQQQQQQ 928

 Score = 32.3 bits (72), Expect = 5.6
 Identities = 24/56 (42%), Positives = 24/56 (42%), Gaps = 20/56 (35%)
 Frame = +1

Query: 502 QQQQQP---QQQPQQLQQQQQHMG-----------------RGRQGRGGRGGMPQQ 609
           QQQQ P   QQQ QQLQQQQQ                     G QG    G MPQQ
Sbjct: 819 QQQQVPTPQQQQQQQLQQQQQQYSPFSNQNANANFLNCPPRGGPQGNQAPGNMPQQ 874

 Score = 32.0 bits (71), Expect = 7.4
 Identities = 15/24 (62%), Positives = 16/24 (66%)
 Frame = +1

Query: 490 QMQPQQQQQPQQQPQQLQQQQQHM 561
           Q Q QQQQQ QQQ   LQ  QQH+
Sbjct: 28  QQQQQQQQQQQQQHLNLQLHQQHL 51

 Score = 32.0 bits (71), Expect = 7.4
 Identities = 15/18 (83%), Positives = 15/18 (83%)
 Frame = +1

Query: 502 QQQQQPQQQPQQLQQQQQ 555
           QQQQQ QQQ QQ QQQQQ
Sbjct: 22  QQQQQQQQQQQQQQQQQQ 39

 Score = 31.6 bits (70), Expect = 9.6
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = +1

Query: 490 QMQPQQQQQPQQQPQQLQQQQQHMGRGRQGRGGRGGMPQQH 612
           Q Q Q QQ  QQQ QQ Q QQ    + +Q    +    QQH
Sbjct: 365 QQQQQHQQHQQQQHQQQQHQQHQQHQQQQQHQQQQHQQQQH 405

 Score = 31.6 bits (70), Expect = 9.6
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +1

Query: 490 QMQPQQQQQPQQQPQQLQQQQQHMGRGRQGRGG 588
           Q+Q QQQQQ +QQ QQ QQQ           GG
Sbjct: 84  QLQVQQQQQQRQQQQQQQQQHSLYNANLAAAGG 116

>sp|P21519|MAM_DROME NEUROGENIC PROTEIN MASTERMIND gi|103241|pir||A33106 neurogenic locus
            mam protein - fruit fly (Drosophila melanogaster)
            gi|8204|emb|CAA38152.1| nuclear protein [Drosophila
            melanogaster]
          Length = 1596

 Score = 56.2 bits (134), Expect = 4e-07
 Identities = 61/187 (32%), Positives = 75/187 (39%), Gaps = 23/187 (12%)
 Frame = +1

Query: 109  SGHGPQTQWVPVGVPYVPNGMIAPGMMAPGMVFGPAYGYASPGPISTMTTADGLRGAYAF 288
            +G GP+T    +GVPY        G    G + GP      P   +   T DG       
Sbjct: 1299 AGGGPRTG---MGVPY--------GGGRGGPMGGPQQQQRPP---NVQVTPDG------- 1337

Query: 289  GGMPTAVQGADEAAALAERLNELQLGARGRG-PVH-GPGGFTRGGLAGPSGMP------G 444
              MP   Q       + ++  ++  G  G G P+  GPGGF  GG   P+G P      G
Sbjct: 1338 --MPMGSQQEWRHMMMTQQQTQMGFGGPGPGGPMRQGPGGFN-GGNFMPNGAPNGAAGSG 1394

Query: 445  PGLQSQFYYTPGPPMQMQPQQQQQP---QQQPQQLQQQQQHMGRG------------RQG 579
            P           P MQ+ P Q QQ    QQQ QQ QQQQQHMG G            +Q 
Sbjct: 1395 PNAGGMMTGPNVPQMQLTPAQMQQQLMRQQQQQQQQQQQQHMGPGAANNMQMQQLLQQQQ 1454

Query: 580  RGGRGGM 600
             GG G M
Sbjct: 1455 SGGGGNM 1461

 Score = 49.3 bits (116), Expect = 4e-05
 Identities = 28/48 (58%), Positives = 30/48 (62%), Gaps = 5/48 (10%)
 Frame = +1

Query: 475 PGPPMQMQPQQQQQPQQQPQQLQQQQQH---MGRGRQGRGG--RGGMP 603
           P PP  M PQQQQQ QQQ QQ Q QQQH   MG+G+ GR     GG P
Sbjct: 642 PRPPHGMNPQQQQQQQQQQQQQQAQQQHGQMMGQGQPGRYNDYGGGFP 689

 Score = 40.8 bits (94), Expect = 0.016
 Identities = 46/167 (27%), Positives = 59/167 (34%), Gaps = 9/167 (5%)
 Frame = +1

Query: 121  PQTQWVPVGVPYVPNGMIAPGMMAPGMVFGPAYGYASPGPISTMTTADGLRGAYAFGGMP 300
            P  Q   VGV       +  G+   G+V GP  G  + G ++ M    G       GG  
Sbjct: 1085 PLMQQPQVGVGVGVGVGVGVGVGNGGVVGGPGSGGPNNGAMNQMGGPMGGMPGMQMGGPM 1144

Query: 301  TAVQGADEAAALAERLNELQLGARGRGPVHGPGGFTRGGLAGPSGMPGPGLQSQFYYTPG 480
              +Q    AA    +   +  GA G G V GPG        GP+      LQ Q      
Sbjct: 1145 NPMQMNPNAAGPTAQQMMMGSGAGGPGQVPGPG-------QGPNPNQAKFLQQQQMMRAQ 1197

Query: 481  PPMQMQ---------PQQQQQPQQQPQQLQQQQQHMGRGRQGRGGRG 594
               Q Q         P +    + Q  Q Q  QQ +G G  G GG G
Sbjct: 1198 AMQQQQQHMSGARPPPPEYNATKAQLMQAQMMQQTVGGGGVGVGGVG 1244

 Score = 38.5 bits (88), Expect = 0.079
 Identities = 47/173 (27%), Positives = 63/173 (36%), Gaps = 20/173 (11%)
 Frame = +1

Query: 151  PYVPNGMIAPGMMAPGMVFGPAYGYASPGPISTMTTADGLRGA-------YAFGGMPTAV 309
            P     M+  G   PG V GP  G  +P     +     +R         +  G  P   
Sbjct: 1156 PTAQQMMMGSGAGGPGQVPGPGQG-PNPNQAKFLQQQQMMRAQAMQQQQQHMSGARPPPP 1214

Query: 310  Q-GADEAAALAERLNELQLGARGRGPVHGPG-GFTRGGLAGPSGMPGPGLQSQFYYTPGP 483
            +  A +A  +  ++ +  +G  G G V G G G   GG+ G +G   P   +Q       
Sbjct: 1215 EYNATKAQLMQAQMMQQTVGGGGVG-VGGVGVGVGVGGVGGANGGRFPNSAAQA--AAMR 1271

Query: 484  PMQMQPQQQQQPQQQPQQLQQQQQHMGRG-----------RQGRGGRGGMPQQ 609
             M  QP     P  +PQ     QQH G G             GRGG  G PQQ
Sbjct: 1272 RMTQQPIPPSGPMMRPQHAMYMQQHGGAGGGPRTGMGVPYGGGRGGPMGGPQQ 1324

 Score = 37.4 bits (85), Expect = 0.17
 Identities = 21/50 (42%), Positives = 24/50 (48%)
 Frame = +1

Query: 451 LQSQFYYTPGPPMQMQPQQQQQPQQQPQQLQQQQQHMGRGRQGRGGRGGM 600
           LQ Q +       Q+Q QQQQQ QQQ QQ QQQ           GG  G+
Sbjct: 52  LQQQQHNAQAQQQQIQVQQQQQQQQQQQQQQQQHSPYNANLGATGGIAGI 101

 Score = 37.4 bits (85), Expect = 0.17
 Identities = 32/90 (35%), Positives = 39/90 (42%)
 Frame = +1

Query: 289 GGMPTAVQGADEAAALAERLNELQLGARGRGPVHGPGGFTRGGLAGPSGMPGPGLQSQFY 468
           GG+P   Q A +AAA+A++  + Q        +H           G        LQ Q  
Sbjct: 4   GGLPV-FQSASQAAAVAQQQQQQQQQQHLNLQLHQQH-------LGLHLQQQQQLQLQQQ 55

Query: 469 YTPGPPMQMQPQQQQQPQQQPQQLQQQQQH 558
                  Q Q Q QQQ QQQ QQ QQQQQH
Sbjct: 56  QHNAQAQQQQIQVQQQQQQQQQQQQQQQQH 85

 Score = 35.8 bits (81), Expect = 0.51
 Identities = 18/32 (56%), Positives = 20/32 (62%)
 Frame = +1

Query: 481 PPMQMQPQQQQQPQQQPQQLQQQQQHMGRGRQ 576
           P    Q QQQQ PQQQ QQ QQQQQ   + +Q
Sbjct: 784 PNFNKQQQQQQVPQQQLQQQQQQQQQQQQQQQ 815

 Score = 35.8 bits (81), Expect = 0.51
 Identities = 28/73 (38%), Positives = 30/73 (40%)
 Frame = +1

Query: 385 VHGPGGFTRGGLAGPSGMPGPGLQSQFYYTPGPPMQMQPQQQQQPQQQPQQLQQQQQHMG 564
           V G GG   GG +G +   G G         G          QQ QQ   Q QQQQQ  G
Sbjct: 354 VGGGGGGGGGGNSGNNNNNGGGGGGG----NGNNNNNGGDHHQQQQQHQHQQQQQQQGGG 409

Query: 565 RGRQGRGGRGGMP 603
            G  G  GRGG P
Sbjct: 410 LGGLGNNGRGGGP 422

 Score = 33.9 bits (76), Expect = 1.9
 Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = +1

Query: 442 GPGLQSQFYYTP-GPPMQMQPQQQQQPQQQ--PQQLQQQQ 552
           G G  + F   P GP  Q Q  QQQQPQQQ  P Q  QQ+
Sbjct: 685 GGGFPNDFGLGPNGPQQQQQQAQQQQPQQQHLPPQFHQQK 724

 Score = 33.9 bits (76), Expect = 1.9
 Identities = 31/107 (28%), Positives = 40/107 (36%), Gaps = 25/107 (23%)
 Frame = +1

Query: 370 RGRGPVHGPGGFTRGGLAGPSGMPGPG--------LQSQFYYTPGPPMQMQPQQQQQ--- 516
           RG  P +  GGF  G   G  G P  G        L S+         QM  Q Q +   
Sbjct: 577 RGGNPGN-QGGFPNGPNGGTGGAPNAGGNGGNSGNLMSEHPLAAQTLKQMAEQHQHKNAM 635

Query: 517 --------------PQQQPQQLQQQQQHMGRGRQGRGGRGGMPQQHS 615
                         PQQQ QQ QQQQQ   + + G+    G P +++
Sbjct: 636 GGMGGFPRPPHGMNPQQQQQQQQQQQQQQAQQQHGQMMGQGQPGRYN 682

 Score = 33.5 bits (75), Expect = 2.5
 Identities = 17/35 (48%), Positives = 19/35 (53%)
 Frame = +1

Query: 433 GMPGPGLQSQFYYTPGPPMQMQPQQQQQPQQQPQQ 537
           G+P    Q Q    P   +Q Q QQQQQ QQQ QQ
Sbjct: 782 GVPNFNKQQQQQQVPQQQLQQQQQQQQQQQQQQQQ 816

 Score = 33.5 bits (75), Expect = 2.5
 Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
 Frame = +1

Query: 427  PSGMPGPGLQSQFYYTP---GPPMQMQP----QQQQQPQQQPQQLQQQQQHMGRGRQGRG 585
            P     P   + F   P   GP    QP    QQQQQP   PQQ QQQ+ + G G+Q   
Sbjct: 819  PFSNQNPNAAANFLNCPPRGGPNGNQQPGNLAQQQQQPGAGPQQ-QQQRGNAGNGQQNNP 877

Query: 586  GRG 594
              G
Sbjct: 878  NTG 880

 Score = 32.3 bits (72), Expect = 5.6
 Identities = 18/38 (47%), Positives = 21/38 (54%)
 Frame = +1

Query: 502 QQQQQPQQQPQQLQQQQQHMGRGRQGRGGRGGMPQQHS 615
           QQQQQ QQQ   LQ  QQH+G   Q +       QQH+
Sbjct: 21  QQQQQQQQQHLNLQLHQQHLGLHLQQQQQLQLQQQQHN 58

 Score = 32.3 bits (72), Expect = 5.6
 Identities = 24/64 (37%), Positives = 29/64 (44%), Gaps = 6/64 (9%)
 Frame = +1

Query: 421  AGPS-----GMPGPGLQSQFYYTPGPPMQMQPQQQQQPQQQPQQLQQQQ-QHMGRGRQGR 582
            AGP      G  G G Q+     PG      PQQQQQ Q     LQ +Q Q +   +QG 
Sbjct: 858  AGPQQQQQRGNAGNGQQNNPNTGPGGNTPNAPQQQQQQQSTTTTLQMKQTQQLHISQQGG 917

Query: 583  GGRG 594
            G +G
Sbjct: 918  GAQG 921

>ref|NP_496274.1| putative protein (15.6 kD) (2K854) [Caenorhabditis elegans]
           gi|7495472|pir||T18975 hypothetical protein C06A1.6 -
           Caenorhabditis elegans gi|3874010|emb|CAA90055.1|
           Hypothetical protein C06A1.6 [Caenorhabditis elegans]
          Length = 152

 Score = 55.1 bits (131), Expect = 8e-07
 Identities = 26/62 (41%), Positives = 26/62 (41%), Gaps = 16/62 (25%)
 Frame = -1

Query: 611 CCCGMPPRPPRPWRPRPICCC---CCCNCCG-------------CCCGCCCCCGCICIGG 480
           CCC          RPR  CCC   CCC CC              CCCGC C CGC   GG
Sbjct: 72  CCC----------RPRCCCCCRPKCCCTCCRTCCCTRCCTCCRPCCCGCGCGCGCCGCGG 121

Query: 479 PG 474
            G
Sbjct: 122 GG 123

 Score = 42.4 bits (98), Expect = 0.005
 Identities = 17/33 (51%), Positives = 17/33 (51%), Gaps = 11/33 (33%)
 Frame = -1

Query: 554 CCCCCNC------CGCCC---GCCCCC--GCIC 489
           CC CC C      CGCCC    CCCCC   C C
Sbjct: 56  CCGCCGCGGGGGGCGCCCCRPRCCCCCRPKCCC 88

 Score = 41.2 bits (95), Expect = 0.012
 Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 19/42 (45%)
 Frame = -1

Query: 557 CCCCCCNCC-----GCCCGCC--------------CCCGCIC 489
           CCCC   CC      CCC CC              CCCGC C
Sbjct: 71  CCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRPCCCGCGC 112

 Score = 37.7 bits (86), Expect = 0.13
 Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = -1

Query: 557 CCCCCCNC-CGCCCGCCCCCGC 495
           C CCCC   C CCC   CCC C
Sbjct: 69  CGCCCCRPRCCCCCRPKCCCTC 90

 Score = 37.0 bits (84), Expect = 0.23
 Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 6/29 (20%)
 Frame = -1

Query: 545 CCNCCGCC-----CGCCCCC-GCICIGGP 477
           CC CCGC      CGCCCC   C C   P
Sbjct: 56  CCGCCGCGGGGGGCGCCCCRPRCCCCCRP 84



EST assemble image


clone accession position
1 LCL087e07_r AV631005 1 400
2 LCL019b06_r AV626973 7 530
3 LCL083f09_r AV630746 18 518
4 LCL019f07_r AV627004 22 519
5 LCL027g03_r AV627504 22 568
6 LCL067c07_r AV629839 25 483
7 LCL063e01_r AV629677 29 559
8 LCL037a08_r AV628122 34 577
9 LCL019d06_r AV626988 74 569
10 MXL059b02_r BP096459 86 472
11 LCL048e12_r AV628893 100 377
12 MXL082g08_r BP097877 220 619




Chlamydomonas reinhardtii
Kazusa DNA Research Institute