Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003125A_C01 KCC003125A_c01
(505 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_045241.1| 24 [Equine herpesvirus 4] gi|11278231|pir||T425... 53 2e-06
gb|AAH44180.1| Similar to Wiskott-Aldrich syndrome-like (human) ... 52 4e-06
ref|XP_116929.1| hypothetical protein XP_116929 [Homo sapiens] 50 2e-05
ref|XP_346074.1| similar to alpha 3 type VI collagen isoform 1 p... 49 3e-05
pir||S22697 extensin - Volvox carteri (fragment) gi|21992|emb|CA... 49 3e-05
>ref|NP_045241.1| 24 [Equine herpesvirus 4] gi|11278231|pir||T42567 tegument protein 24
- equine herpesvirus 4 (strain NS80567)
gi|2605967|gb|AAC59539.1| 24 [Equine herpesvirus 4]
Length = 3534
Score = 53.1 bits (126), Expect = 2e-06
Identities = 44/132 (33%), Positives = 57/132 (42%), Gaps = 7/132 (5%)
Frame = -3
Query: 503 APGPRS*G*GRAPWPPQPSPPPTRQRAAAPPR--SARNSPSGSGWGAAGSRPGAPQ*GGP 330
AP P AP P +P P++ AA P +A +PS A S+P A
Sbjct: 2725 APAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSK 2784
Query: 329 PARGRARSRPALVWPLPLQP-RPPAPQRAG*APELASFHRAPAAHKASAQKCAKKPALRP 153
PA A S+PA P P +P PAP + AP + APA K +A KPA P
Sbjct: 2785 PAAAPAPSKPAAA-PAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAP 2843
Query: 152 ----PFSTRSPS 129
P + +PS
Sbjct: 2844 APSKPAAAPAPS 2855
Score = 53.1 bits (126), Expect = 2e-06
Identities = 44/132 (33%), Positives = 57/132 (42%), Gaps = 7/132 (5%)
Frame = -3
Query: 503 APGPRS*G*GRAPWPPQPSPPPTRQRAAAPPR--SARNSPSGSGWGAAGSRPGAPQ*GGP 330
AP P AP P +P P++ AA P +A +PS A S+P A
Sbjct: 2743 APAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSK 2802
Query: 329 PARGRARSRPALVWPLPLQP-RPPAPQRAG*APELASFHRAPAAHKASAQKCAKKPALRP 153
PA A S+PA P P +P PAP + AP + APA K +A KPA P
Sbjct: 2803 PAAAPAPSKPAAA-PAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAP 2861
Query: 152 ----PFSTRSPS 129
P + +PS
Sbjct: 2862 APSKPAAAPAPS 2873
Score = 53.1 bits (126), Expect = 2e-06
Identities = 44/132 (33%), Positives = 57/132 (42%), Gaps = 7/132 (5%)
Frame = -3
Query: 503 APGPRS*G*GRAPWPPQPSPPPTRQRAAAPPR--SARNSPSGSGWGAAGSRPGAPQ*GGP 330
AP P AP P +P P++ AA P +A +PS A S+P A
Sbjct: 2779 APAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSK 2838
Query: 329 PARGRARSRPALVWPLPLQPRP-PAPQRAG*APELASFHRAPAAHKASAQKCAKKPALRP 153
PA A S+PA P P +P PAP + AP + APA K +A KPA P
Sbjct: 2839 PAAAPAPSKPAAA-PAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAP 2897
Query: 152 ----PFSTRSPS 129
P + +PS
Sbjct: 2898 APSKPAAAPAPS 2909
Score = 53.1 bits (126), Expect = 2e-06
Identities = 44/132 (33%), Positives = 57/132 (42%), Gaps = 7/132 (5%)
Frame = -3
Query: 503 APGPRS*G*GRAPWPPQPSPPPTRQRAAAPPR--SARNSPSGSGWGAAGSRPGAPQ*GGP 330
AP P AP P +P P++ AA P +A +PS A S+P A
Sbjct: 2734 APAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSK 2793
Query: 329 PARGRARSRPALVWPLPLQP-RPPAPQRAG*APELASFHRAPAAHKASAQKCAKKPALRP 153
PA A S+PA P P +P PAP + AP + APA K +A KPA P
Sbjct: 2794 PAAAPAPSKPAAA-PAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAP 2852
Query: 152 ----PFSTRSPS 129
P + +PS
Sbjct: 2853 APSKPAAAPAPS 2864
Score = 49.3 bits (116), Expect = 3e-05
Identities = 39/116 (33%), Positives = 50/116 (42%), Gaps = 3/116 (2%)
Frame = -3
Query: 503 APGPRS*G*GRAPWPPQPSPPPTRQRAAAPPR--SARNSPSGSGWGAAGSRPGAPQ*GGP 330
AP P AP P +P P++ AA P +A +PS A S+P A
Sbjct: 2797 APAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSK 2856
Query: 329 PARGRARSRPALVWPLPLQPRP-PAPQRAG*APELASFHRAPAAHKASAQKCAKKP 165
PA A S+PA P P +P PAP + AP + APA K +A KP
Sbjct: 2857 PAAAPAPSKPAAA-PAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKP 2911
Score = 47.4 bits (111), Expect = 1e-04
Identities = 39/119 (32%), Positives = 51/119 (42%), Gaps = 5/119 (4%)
Frame = -3
Query: 470 APWPPQPSPPPTRQRAAAPPRSARNSPSGSGWGAAGSRPGAPQ*GGPPARGRARSRPALV 291
AP P +P P++ AA P +P A S+P A PA A S+PA
Sbjct: 2718 APSKPAAAPAPSKPAAAPAPSKPAAAP-------APSKPAAAPAPSKPAAAPAPSKPAAA 2770
Query: 290 WPLPLQPRP-PAPQRAG*APELASFHRAPAAHKASAQKCAKKPALRP----PFSTRSPS 129
P P +P PAP + AP + APA K +A KPA P P + +PS
Sbjct: 2771 -PAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPS 2828
Score = 33.1 bits (74), Expect = 2.0
Identities = 35/118 (29%), Positives = 44/118 (36%), Gaps = 5/118 (4%)
Frame = -3
Query: 467 PWPPQPSPPPTRQRAAAPPRSARNSPSGSGWGAAGSRPGAPQ*GGPPARGRARSRPALVW 288
PW P P + APP G + G P A A S+PA
Sbjct: 2679 PWRPSIRPSLGPFKFTAPP------------GYSIPMDGLPPPDPNEALLTAPSKPAAA- 2725
Query: 287 PLPLQPRP-PAPQRAG*APELASFHRAPAAHKASAQKCAKKPALRP----PFSTRSPS 129
P P +P PAP + AP + APA K +A KPA P P + +PS
Sbjct: 2726 PAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPS 2783
>gb|AAH44180.1| Similar to Wiskott-Aldrich syndrome-like (human) [Danio rerio]
Length = 518
Score = 52.0 bits (123), Expect = 4e-06
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Frame = -3
Query: 503 APGPRS*G*GRAPWPPQPS------PPPTRQRAAAPPRSARNSPSGSGWGAAGSRP--GA 348
AP P G AP PP P PPP+R R A PP +P+ + SRP GA
Sbjct: 289 APPPPPPSRGGAPPPPPPHNSAPPPPPPSRGRGAPPPPPPSRAPTSAPPPPPPSRPGMGA 348
Query: 347 PQ*GGPPARGRARSRPALVWPLPLQPRPPAPQRAG*AP 234
P PP+RG ++ P P PPAP G AP
Sbjct: 349 PPPPPPPSRGPTQAPPPPPPPHSASISPPAPPSIGGAP 386
Score = 34.3 bits (77), Expect = 0.90
Identities = 30/90 (33%), Positives = 31/90 (34%), Gaps = 1/90 (1%)
Frame = -3
Query: 500 PGPRS*G*GRAPWPPQPSPPPTR-QRAAAPPRSARNSPSGSGWGAAGSRPGAPQ*GGPPA 324
P P G G P PP PS PT+ PP SA SP P P GG P
Sbjct: 339 PPPSRPGMGAPPPPPPPSRGPTQAPPPPPPPHSASISP-----------PAPPSIGGAPP 387
Query: 323 RGRARSRPALVWPLPLQPRPPAPQRAG*AP 234
P P P PP P G P
Sbjct: 388 ------------PPPPPPPPPGPPPPGPPP 405
>ref|XP_116929.1| hypothetical protein XP_116929 [Homo sapiens]
Length = 169
Score = 50.1 bits (118), Expect = 2e-05
Identities = 35/110 (31%), Positives = 46/110 (41%), Gaps = 7/110 (6%)
Frame = -3
Query: 440 PTRQRAAAPPRSARNSPSGSGWGAAGSRPGAPQ*GGPPARGRA-------RSRPALVWPL 282
P + +A PR + G G A G+P GG AR A RSR + W +
Sbjct: 11 PRAESSARRPRGLGGNGRGGGTAAPSHSGGSPGGGGAGARAGAGAGDEERRSRARVGWGV 70
Query: 281 PLQPRPPAPQRAG*APELASFHRAPAAHKASAQKCAKKPALRPPFSTRSP 132
P PRPP P R P R+P A ++ LRPP +R+P
Sbjct: 71 PTGPRPPRPPR----PPAQLRSRSPGAPPEGPRRTPPPCVLRPPRPSRTP 116
>ref|XP_346074.1| similar to alpha 3 type VI collagen isoform 1 precursor; collagen VI,
alpha-3 polypeptide [Rattus norvegicus]
Length = 3298
Score = 49.3 bits (116), Expect = 3e-05
Identities = 39/123 (31%), Positives = 48/123 (38%), Gaps = 11/123 (8%)
Frame = -3
Query: 467 PWPPQ-----PSPPPTRQRAAAPPRSARNSPSGSGWGAAGSRPGAPQ*GGPPARGRARSR 303
P PPQ P+PP T APP++A P+ AA P P P A ++
Sbjct: 2890 PAPPQTAAAKPAPPQTAAAKPAPPQTAAAKPAPPQTAAAKPVPVKPAPAQPVHVQSASAQ 2949
Query: 302 PALVWPLPLQPRPPAPQRAG*APELASFHRAPA------AHKASAQKCAKKPALRPPFST 141
A P+P +P PP A P + PA A A AQ KPA P S
Sbjct: 2950 TASAKPVPAKPAPPQTAAAKPVPVKPAVPAQPAPAQPVHAQPAPAQPVLTKPAAMKPASA 3009
Query: 140 RSP 132
P
Sbjct: 3010 NKP 3012
Score = 39.7 bits (91), Expect = 0.021
Identities = 31/113 (27%), Positives = 43/113 (37%)
Frame = -3
Query: 467 PWPPQPSPPPTRQRAAAPPRSARNSPSGSGWGAAGSRPGAPQ*GGPPARGRARSRPALVW 288
P P +P+PP T APP++A P+ AA +P PQ A
Sbjct: 2885 PAPAKPAPPQTAAAKPAPPQTAAAKPAPPQTAAA--KPAPPQ-------------TAAAK 2929
Query: 287 PLPLQPRPPAPQRAG*APELASFHRAPAAHKASAQKCAKKPALRPPFSTRSPS 129
P+P++P P P A + + A A Q A KP P P+
Sbjct: 2930 PVPVKPAPAQPVHVQSASAQTASAKPVPAKPAPPQTAAAKPVPVKPAVPAQPA 2982
Score = 33.9 bits (76), Expect = 1.2
Identities = 32/105 (30%), Positives = 41/105 (38%)
Frame = -3
Query: 458 PQPSPPPTRQRAAAPPRSARNSPSGSGWGAAGSRPGAPQ*GGPPARGRARSRPALVWPLP 279
P P+ P + AA P SA N P + A + P PA A S+PA PLP
Sbjct: 2991 PAPAQPVLTKPAAMKPASA-NKPVAAKPVATNTATVRPASAVKPA---AASKPAATRPLP 3046
Query: 278 LQPRPPAPQRAG*APELASFHRAPAAHKASAQKCAKKPALRPPFS 144
RP A + P A + A+ A KPA P +
Sbjct: 3047 AAVRPVATK--------------PEAPRPQAKPAATKPATTKPMA 3077
>pir||S22697 extensin - Volvox carteri (fragment) gi|21992|emb|CAA46283.1|
extensin [Volvox carteri]
Length = 464
Score = 49.3 bits (116), Expect = 3e-05
Identities = 42/123 (34%), Positives = 49/123 (39%)
Frame = -3
Query: 500 PGPRS*G*GRAPWPPQPSPPPTRQRAAAPPRSARNSPSGSGWGAAGSRPGAPQ*GGPPAR 321
P PRS P PP PSPPP R + PP R+SPS P P PP
Sbjct: 323 PPPRSSPSPPPPSPPPPSPPPPRPSPSPPP--PRSSPS----------PPPPVVSPPPPP 370
Query: 320 GRARSRPALVWPLPLQPRPPAPQRAG*APELASFHRAPAAHKASAQKCAKKPALRPPFST 141
RA P P PRPP P +P + A AA + ++ A PP T
Sbjct: 371 PRASPPPPPASSPPPPPRPPPP-----SPPPSPPPPATAAANPPSPAPSRSRAGGPPLGT 425
Query: 140 RSP 132
R P
Sbjct: 426 RPP 428
Score = 36.2 bits (82), Expect = 0.24
Identities = 38/122 (31%), Positives = 46/122 (37%), Gaps = 10/122 (8%)
Frame = -3
Query: 467 PWPPQ--PSPPPTRQRAAAPPRSARNSPSGSGWGAAGSRPGAPQ*GGPPARGRARSRPAL 294
P PP+ PSPPP + PP R SPS S P P P+ RS P+
Sbjct: 273 PPPPRVPPSPPPP-VASPPPPPPPRVSPSPPPPQPVSSPPPPPPPRPSPSPPPPRSSPSP 331
Query: 293 VWPLPLQPRPPAPQ--------RAG*APELASFHRAPAAHKASAQKCAKKPALRPPFSTR 138
P P P PP P+ R+ +P P +AS PA PP R
Sbjct: 332 PPPSPPPPSPPPPRPSPSPPPPRSSPSPPPPVVSPPPPPPRASP---PPPPASSPPPPPR 388
Query: 137 SP 132
P
Sbjct: 389 PP 390
Score = 35.8 bits (81), Expect = 0.31
Identities = 26/77 (33%), Positives = 32/77 (40%), Gaps = 2/77 (2%)
Frame = -3
Query: 473 RAPWPPQPSPPPTRQRAAAPPRSARNSPSGSGWGAAGSR--PGAPQ*GGPPARGRARSRP 300
R P P P PP AAA P S S S +G G+R P P+ PP P
Sbjct: 388 RPPPPSPPPSPPPPATAAANPPSPAPSRSRAGGPPLGTRPPPPPPEDDAPP--------P 439
Query: 299 ALVWPLPLQPRPPAPQR 249
+P P PP P++
Sbjct: 440 DYYFPPPQDMSPPPPKK 456
Score = 33.1 bits (74), Expect = 2.0
Identities = 30/83 (36%), Positives = 35/83 (42%)
Frame = -3
Query: 500 PGPRS*G*GRAPWPPQPSPPPTRQRAAAPPRSARNSPSGSGWGAAGSRPGAPQ*GGPPAR 321
P PR+ P PP SPPP PPR SP S P A PP+
Sbjct: 369 PPPRA----SPPPPPASSPPP-------PPRPPPPSPPPS------PPPPATAAANPPSP 411
Query: 320 GRARSRPALVWPLPLQPRPPAPQ 252
+RSR A PL +P PP P+
Sbjct: 412 APSRSR-AGGPPLGTRPPPPPPE 433
Score = 32.7 bits (73), Expect = 2.6
Identities = 29/103 (28%), Positives = 36/103 (34%), Gaps = 2/103 (1%)
Frame = -3
Query: 452 PSPPPTRQRAAAPPRSARNSPSGSGWGAAGSRPGAPQ*GGPPARGRARSRPALVW--PLP 279
PSPPP + + +PP AR S S P PP R P L PLP
Sbjct: 220 PSPPPPPRVSTSPPPPARVSSS-----------PPPATRSPPPRRITSPSPVLTASPPLP 268
Query: 278 LQPRPPAPQRAG*APELASFHRAPAAHKASAQKCAKKPALRPP 150
PP P+ P + P + S +P PP
Sbjct: 269 KTSPPPPPRVPPSPPPPVASPPPPPPPRVSPSPPPPQPVSSPP 311
Score = 30.8 bits (68), Expect = 9.9
Identities = 27/114 (23%), Positives = 37/114 (31%)
Frame = -3
Query: 470 APWPPQPSPPPTRQRAAAPPRSARNSPSGSGWGAAGSRPGAPQ*GGPPARGRARSRPALV 291
+P P+ SPPP + +PP + P PP R P
Sbjct: 264 SPPLPKTSPPPPPRVPPSPPPPVASPP-------------------PPPPPRVSPSPPPP 304
Query: 290 WPLPLQPRPPAPQRAG*APELASFHRAPAAHKASAQKCAKKPALRPPFSTRSPS 129
P+ P PP P+ + P S P +P+ PP SPS
Sbjct: 305 QPVSSPPPPPPPRPSPSPPPPRSSPSPPPPSPPPPSPPPPRPSPSPPPPRSSPS 358
